RNA–Protein interactions for RNA: ENST00000514442.5

TCOF1-213, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,195 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-213ENST00000514442 C1QCP02747 245 aa11.81□□□□□ -0.52
TCOF1-213ENST00000514442 PRF1P14222 555 aa11.81□□□□□ -0.52
TCOF1-213ENST00000514442 PNLIPRP2P54317 469 aa11.81□□□□□ -0.52
TCOF1-213ENST00000514442 FOXF1Q12946 379 aa11.81□□□□□ -0.52
TCOF1-213ENST00000514442 ZNF266Q14584 549 aa11.81□□□□□ -0.52
TCOF1-213ENST00000514442 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.81□□□□□ -0.52
TCOF1-213ENST00000514442 ARIH2OSQ8N7S6 290 aa11.81□□□□□ -0.52
TCOF1-213ENST00000514442 C2orf50Q96LR7 162 aa11.81□□□□□ -0.52
TCOF1-213ENST00000514442 FBXO34Q9NWN3 711 aa11.81□□□□□ -0.52
TCOF1-213ENST00000514442 PIGLQ9Y2B2 252 aa11.81□□□□□ -0.52
TCOF1-213ENST00000514442 GREB1LQ9C091 1923 aaPredicted RBP11.81□□□□□ -0.52
TCOF1-213ENST00000514442 MFNGO00587 321 aa11.81□□□□□ -0.52
TCOF1-213ENST00000514442 MIDNQ504T8 468 aa11.81□□□□□ -0.52
TCOF1-213ENST00000514442 OR2L13Q8N349 312 aa11.81□□□□□ -0.52
TCOF1-213ENST00000514442 PSMF1Q92530 271 aa11.81□□□□□ -0.52
TCOF1-213ENST00000514442 TMEM18Q96B42 140 aa11.81□□□□□ -0.52
TCOF1-213ENST00000514442 WDR34Q96EX3 536 aa11.81□□□□□ -0.52
TCOF1-213ENST00000514442 TNFSF18Q9UNG2 199 aa11.81□□□□□ -0.52
TCOF1-213ENST00000514442 M0R143 59 aa11.8□□□□□ -0.52
TCOF1-213ENST00000514442 BCKDHBP21953 392 aa11.8□□□□□ -0.52
TCOF1-213ENST00000514442 ZP1P60852 638 aa11.8□□□□□ -0.52
TCOF1-213ENST00000514442 SSX7Q7RTT5 188 aa11.8□□□□□ -0.52
TCOF1-213ENST00000514442 EIF4E3Q8N5X7 224 aaKnown RBP11.8□□□□□ -0.52
TCOF1-213ENST00000514442 GJC3Q8NFK1 279 aa11.8□□□□□ -0.52
TCOF1-213ENST00000514442 TVP23CQ96ET8 276 aa11.8□□□□□ -0.52
TCOF1-213ENST00000514442 GDF15Q99988 308 aa11.8□□□□□ -0.52
TCOF1-213ENST00000514442 VN1R1Q9GZP7 353 aa11.8□□□□□ -0.52
TCOF1-213ENST00000514442 FKRPQ9H9S5 495 aa11.8□□□□□ -0.52
TCOF1-213ENST00000514442 C19orf12Q9NSK7 152 aa11.8□□□□□ -0.52
TCOF1-213ENST00000514442 MTCH2Q9Y6C9 303 aa11.8□□□□□ -0.52
TCOF1-213ENST00000514442 TIMM8AO60220 97 aaPredicted RBP11.8□□□□□ -0.52
TCOF1-213ENST00000514442 SLC25A4P12235 298 aa11.8□□□□□ -0.52
TCOF1-213ENST00000514442 RBMS3Q6XE24 437 aaKnown RBP11.8□□□□□ -0.52
TCOF1-213ENST00000514442 APH1AQ96BI3 265 aa11.8□□□□□ -0.52
TCOF1-213ENST00000514442 TAS2R4Q9NYW5 299 aa11.8□□□□□ -0.52
TCOF1-213ENST00000514442 RP1L1Q8IWN7 2480 aaPredicted RBP11.8□□□□□ -0.52
TCOF1-213ENST00000514442 NUP214P35658 2090 aaPredicted RBP11.8□□□□□ -0.52
TCOF1-213ENST00000514442 ARG1P05089 322 aa11.8□□□□□ -0.52
TCOF1-213ENST00000514442 ITGB2P05107 769 aa11.8□□□□□ -0.52
TCOF1-213ENST00000514442 DMKNQ6E0U4 476 aaPredicted RBP11.8□□□□□ -0.52
TCOF1-213ENST00000514442 FBXW12Q6X9E4 464 aa11.8□□□□□ -0.52
TCOF1-213ENST00000514442 SLC22A24Q8N4F4 322 aa11.8□□□□□ -0.52
TCOF1-213ENST00000514442 LIN37Q96GY3 246 aaPredicted RBP11.8□□□□□ -0.52
TCOF1-213ENST00000514442 ARHGDIGQ99819 225 aa11.8□□□□□ -0.52
TCOF1-213ENST00000514442 NRIP2Q9BQI9 281 aa11.8□□□□□ -0.52
TCOF1-213ENST00000514442 HEXA-AS1Q9H8Q6 139 aa11.8□□□□□ -0.52
TCOF1-213ENST00000514442 PCDHGA5Q9Y5G8 931 aa11.8□□□□□ -0.52
TCOF1-213ENST00000514442 TRPM6Q9BX84 2022 aa11.8□□□□□ -0.52
TCOF1-213ENST00000514442 SPINT1O43278 529 aa11.8□□□□□ -0.52
TCOF1-213ENST00000514442 CXCL13O43927 109 aa11.8□□□□□ -0.52
TCOF1-213ENST00000514442 CST4P01036 141 aa11.8□□□□□ -0.52
TCOF1-213ENST00000514442 ZNF25P17030 456 aaPredicted RBP11.8□□□□□ -0.52
TCOF1-213ENST00000514442 NXPH1P58417 271 aa11.8□□□□□ -0.52
TCOF1-213ENST00000514442 OR2G3Q8NGZ4 309 aa11.8□□□□□ -0.52
TCOF1-213ENST00000514442 OR4C3Q8NH37 302 aa11.8□□□□□ -0.52
TCOF1-213ENST00000514442 RBM14Q96PK6 669 aaKnown RBP11.8□□□□□ -0.52
TCOF1-213ENST00000514442 NICN1Q9BSH3 213 aa11.8□□□□□ -0.52
TCOF1-213ENST00000514442 DYNLRB1Q9NP97 96 aa11.8□□□□□ -0.52
TCOF1-213ENST00000514442 METTL1Q9UBP6 276 aaKnown RBP11.8□□□□□ -0.52
TCOF1-213ENST00000514442 LPAR3Q9UBY5 353 aa11.8□□□□□ -0.52
TCOF1-213ENST00000514442 DUSP13Q9UII6 198 aa11.8□□□□□ -0.52
TCOF1-213ENST00000514442 LOC107986453A0A1B0GWG9 222 aa11.79□□□□□ -0.52
TCOF1-213ENST00000514442 ZNF724A8MTY0 619 aa11.79□□□□□ -0.52
TCOF1-213ENST00000514442 NSUN5P2Q63ZY6 315 aa11.79□□□□□ -0.52
TCOF1-213ENST00000514442 WDR88Q6ZMY6 472 aa11.79□□□□□ -0.52
TCOF1-213ENST00000514442 C16orf47Q6ZP98 133 aaPredicted RBP11.79□□□□□ -0.52
TCOF1-213ENST00000514442 ZADH2Q8N4Q0 377 aa11.79□□□□□ -0.52
TCOF1-213ENST00000514442 SMRP1Q8NCR6 262 aa11.79□□□□□ -0.52
TCOF1-213ENST00000514442 OR5AP2Q8NGF4 316 aa11.79□□□□□ -0.52
TCOF1-213ENST00000514442 OR51E1Q8TCB6 317 aa11.79□□□□□ -0.52
TCOF1-213ENST00000514442 SLC5A6Q9Y289 635 aa11.79□□□□□ -0.52
TCOF1-213ENST00000514442 R4GN57 208 aa11.79□□□□□ -0.52
TCOF1-213ENST00000514442 POU2F2P09086 479 aa11.79□□□□□ -0.52
TCOF1-213ENST00000514442 TNFSF4P23510 183 aa11.79□□□□□ -0.52
TCOF1-213ENST00000514442 GLIPR1L1Q6UWM5 242 aa11.79□□□□□ -0.52
TCOF1-213ENST00000514442 PPP1R35Q8TAP8 253 aa11.79□□□□□ -0.52
TCOF1-213ENST00000514442 SLAMF6Q96DU3 332 aa11.79□□□□□ -0.52
TCOF1-213ENST00000514442 MENTQ9BUN1 341 aa11.79□□□□□ -0.52
TCOF1-213ENST00000514442 MFRPQ9BY79 579 aa11.79□□□□□ -0.52
TCOF1-213ENST00000514442 TNFSF11O14788 317 aa11.79□□□□□ -0.52
TCOF1-213ENST00000514442 H2AFB1P0C5Y9 115 aa11.79□□□□□ -0.52
TCOF1-213ENST00000514442 LBHQ53QV2 105 aaPredicted RBP11.79□□□□□ -0.52
TCOF1-213ENST00000514442 ZNF770Q6IQ21 691 aaPredicted RBP11.79□□□□□ -0.52
TCOF1-213ENST00000514442 ANKRD16Q6P6B7 361 aa11.79□□□□□ -0.52
TCOF1-213ENST00000514442 LILRB2Q8N423 598 aa11.79□□□□□ -0.52
TCOF1-213ENST00000514442 NKAIN3Q8N8D7 197 aa11.79□□□□□ -0.52
TCOF1-213ENST00000514442 OR1N1Q8NGS0 311 aa11.79□□□□□ -0.52
TCOF1-213ENST00000514442 SLC35B3Q9H1N7 401 aa11.79□□□□□ -0.52
TCOF1-213ENST00000514442 BANF2Q9H503 90 aa11.79□□□□□ -0.52
TCOF1-213ENST00000514442 V9GYS6 101 aa11.79□□□□□ -0.52
TCOF1-213ENST00000514442 CASP8AP2Q9UKL3 1982 aa11.79□□□□□ -0.52
TCOF1-213ENST00000514442 CACNA1CQ13936 2221 aa11.79□□□□□ -0.52
TCOF1-213ENST00000514442 PPP5D1E7EU14 171 aa11.79□□□□□ -0.52
TCOF1-213ENST00000514442 GUSBP08236 651 aa11.79□□□□□ -0.52
TCOF1-213ENST00000514442 CT62P0C5K7 136 aa11.79□□□□□ -0.52
TCOF1-213ENST00000514442 PCP4P48539 62 aa11.79□□□□□ -0.52
TCOF1-213ENST00000514442 HAGHQ16775 308 aa11.79□□□□□ -0.52
TCOF1-213ENST00000514442 DCAF12L2Q5VW00 463 aa11.79□□□□□ -0.52
TCOF1-213ENST00000514442 ZDHHC22Q8N966 263 aa11.79□□□□□ -0.52
TCOF1-213ENST00000514442 KCNG3Q8TAE7 436 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms