RNA–Protein interactions for RNA: ENST00000514219.1

TRIM41-206, Transcript of tripartite motif containing 41, human

TSL 5

Gene TRIM41, Length 459 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRIM41-206	ENST00000514219	FAIM	Q9NVQ4	179 aa		13.74	□□□□□ -0.21
TRIM41-206	ENST00000514219	NKIRAS2	Q9NYR9	191 aa		13.74	□□□□□ -0.21
TRIM41-206	ENST00000514219	MRPL15	Q9P015	296 aa	Known RBP	13.74	□□□□□ -0.21
TRIM41-206	ENST00000514219	RNF115	Q9Y4L5	304 aa		13.74	□□□□□ -0.21
TRIM41-206	ENST00000514219	TRBV5-7	A0A0A0MS05	114 aa		13.73	□□□□□ -0.21
TRIM41-206	ENST00000514219	KIR2DP1	A0A0G2JNF4	349 aa	Predicted RBP	13.73	□□□□□ -0.21
TRIM41-206	ENST00000514219	ANXA2P2	A6NMY6	339 aa		13.73	□□□□□ -0.21
TRIM41-206	ENST00000514219		H3BMQ9	156 aa		13.73	□□□□□ -0.21
TRIM41-206	ENST00000514219	ABCD4	O14678	606 aa		13.73	□□□□□ -0.21
TRIM41-206	ENST00000514219	ALX3	O95076	343 aa		13.73	□□□□□ -0.21
TRIM41-206	ENST00000514219	THBD	P07204	575 aa		13.73	□□□□□ -0.21
TRIM41-206	ENST00000514219	SRM	P19623	302 aa		13.73	□□□□□ -0.21
TRIM41-206	ENST00000514219	PRKACB	P22694	351 aa		13.73	□□□□□ -0.21
TRIM41-206	ENST00000514219	RPS11	P62280	158 aa	Known RBP eCLIP	13.73	□□□□□ -0.21
TRIM41-206	ENST00000514219	CTF1	Q16619	201 aa		13.73	□□□□□ -0.21
TRIM41-206	ENST00000514219	CLVS2	Q5SYC1	327 aa		13.73	□□□□□ -0.21
TRIM41-206	ENST00000514219	SLC16A12	Q6ZSM3	486 aa		13.73	□□□□□ -0.21
TRIM41-206	ENST00000514219	RFPL4B	Q6ZWI9	263 aa		13.73	□□□□□ -0.21
TRIM41-206	ENST00000514219	CDH26	Q8IXH8	852 aa		13.73	□□□□□ -0.21
TRIM41-206	ENST00000514219	ZNF101	Q8IZC7	436 aa		13.73	□□□□□ -0.21
TRIM41-206	ENST00000514219	SPERT	Q8NA61	448 aa		13.73	□□□□□ -0.21
TRIM41-206	ENST00000514219	SPSB1	Q96BD6	273 aa		13.73	□□□□□ -0.21
TRIM41-206	ENST00000514219	HIST1H2AA	Q96QV6	131 aa		13.73	□□□□□ -0.21
TRIM41-206	ENST00000514219	CHST5	Q9GZS9	411 aa		13.73	□□□□□ -0.21
TRIM41-206	ENST00000514219	TMEM138	Q9NPI0	162 aa		13.73	□□□□□ -0.21
TRIM41-206	ENST00000514219	PTTG3P	Q9NZH4	202 aa		13.73	□□□□□ -0.21
TRIM41-206	ENST00000514219	NPAP1	Q9NZP6	1156 aa		13.73	□□□□□ -0.21
TRIM41-206	ENST00000514219	SLC7A11	Q9UPY5	501 aa		13.73	□□□□□ -0.21
TRIM41-206	ENST00000514219	PIGL	Q9Y2B2	252 aa		13.73	□□□□□ -0.21
TRIM41-206	ENST00000514219	STARD10	Q9Y365	291 aa		13.73	□□□□□ -0.21
TRIM41-206	ENST00000514219	CMAHP	Q9Y471	501 aa		13.73	□□□□□ -0.21
TRIM41-206	ENST00000514219	MPC1	Q9Y5U8	109 aa		13.73	□□□□□ -0.21
TRIM41-206	ENST00000514219		A0A1B0GTI1	187 aa		13.72	□□□□□ -0.21
TRIM41-206	ENST00000514219	PLSCR5	A0PG75	271 aa		13.72	□□□□□ -0.21
TRIM41-206	ENST00000514219	ANKRD61	A6NGH8	418 aa		13.72	□□□□□ -0.21
TRIM41-206	ENST00000514219	GPX5	O75715	221 aa		13.72	□□□□□ -0.21
TRIM41-206	ENST00000514219	FAM157B	P0CG42	384 aa		13.72	□□□□□ -0.21
TRIM41-206	ENST00000514219	SOX2	P48431	317 aa		13.72	□□□□□ -0.21
TRIM41-206	ENST00000514219	KLF3	P57682	345 aa	Predicted RBP	13.72	□□□□□ -0.21
TRIM41-206	ENST00000514219	FAM3A	P98173	230 aa		13.72	□□□□□ -0.21
TRIM41-206	ENST00000514219	ZNF92	Q03936	586 aa		13.72	□□□□□ -0.21
TRIM41-206	ENST00000514219	HGFAC	Q04756	655 aa		13.72	□□□□□ -0.21
TRIM41-206	ENST00000514219	GLT8D1	Q68CQ7	371 aa		13.72	□□□□□ -0.21
TRIM41-206	ENST00000514219	DMRTC2	Q8IXT2	367 aa	Predicted RBP	13.72	□□□□□ -0.21
TRIM41-206	ENST00000514219	PNLDC1	Q8NA58	520 aa	Known RBP	13.72	□□□□□ -0.21
TRIM41-206	ENST00000514219	SYNPR	Q8TBG9	265 aa		13.72	□□□□□ -0.21
TRIM41-206	ENST00000514219	C12orf43	Q96C57	262 aa	Known RBP	13.72	□□□□□ -0.21
TRIM41-206	ENST00000514219	PLPPR2	Q96GM1	343 aa		13.72	□□□□□ -0.21
TRIM41-206	ENST00000514219	ZCCHC4	Q9H5U6	513 aa		13.72	□□□□□ -0.21
TRIM41-206	ENST00000514219	NOX4	Q9NPH5	578 aa		13.72	□□□□□ -0.21
TRIM41-206	ENST00000514219	MBD3L2B	A0A1B0GVZ6	204 aa	Predicted RBP	13.71	□□□□□ -0.21
TRIM41-206	ENST00000514219	ATP6V1G2-DDX39B	F2Z307	99 aa		13.71	□□□□□ -0.21
TRIM41-206	ENST00000514219	SULT1B1	O43704	296 aa		13.71	□□□□□ -0.21
TRIM41-206	ENST00000514219	CST4	P01036	141 aa		13.71	□□□□□ -0.21
TRIM41-206	ENST00000514219	BMP4	P12644	408 aa		13.71	□□□□□ -0.21
TRIM41-206	ENST00000514219	KITLG	P21583	273 aa		13.71	□□□□□ -0.21
TRIM41-206	ENST00000514219	EVX1	P49640	407 aa		13.71	□□□□□ -0.21
TRIM41-206	ENST00000514219	DGUOK	Q16854	277 aa		13.71	□□□□□ -0.21
TRIM41-206	ENST00000514219	TMEM91	Q6ZNR0	172 aa		13.71	□□□□□ -0.21
TRIM41-206	ENST00000514219	NAA40	Q86UY6	237 aa		13.71	□□□□□ -0.21
TRIM41-206	ENST00000514219	RDH10	Q8IZV5	341 aa		13.71	□□□□□ -0.21
TRIM41-206	ENST00000514219	PAQR4	Q8N4S7	273 aa	Predicted RBP	13.71	□□□□□ -0.21
TRIM41-206	ENST00000514219	OR14K1	Q8NGZ2	314 aa		13.71	□□□□□ -0.21
TRIM41-206	ENST00000514219	SLC25A40	Q8TBP6	338 aa		13.71	□□□□□ -0.21
TRIM41-206	ENST00000514219	KLF14	Q8TD94	323 aa	Predicted RBP	13.71	□□□□□ -0.21
TRIM41-206	ENST00000514219	RGP1	Q92546	391 aa	Predicted RBP	13.71	□□□□□ -0.21
TRIM41-206	ENST00000514219	FGGY	Q96C11	551 aa		13.71	□□□□□ -0.21
TRIM41-206	ENST00000514219	HAVCR1	Q96D42	359 aa		13.71	□□□□□ -0.21
TRIM41-206	ENST00000514219	C14orf79	Q96F83	325 aa		13.71	□□□□□ -0.21
TRIM41-206	ENST00000514219	SPOCK3	Q9BQ16	436 aa		13.71	□□□□□ -0.21
TRIM41-206	ENST00000514219	CENPO	Q9BU64	300 aa		13.71	□□□□□ -0.21
TRIM41-206	ENST00000514219	PAPOLG	Q9BWT3	736 aa	Known RBP	13.71	□□□□□ -0.21
TRIM41-206	ENST00000514219	OR2J1	Q9GZK6	312 aa		13.71	□□□□□ -0.21
TRIM41-206	ENST00000514219	DCSTAMP	Q9H295	470 aa		13.71	□□□□□ -0.21
TRIM41-206	ENST00000514219	NPDC1	Q9NQX5	325 aa	Predicted RBP	13.71	□□□□□ -0.21
TRIM41-206	ENST00000514219	CD300LB	A8K4G0	201 aa		13.7	□□□□□ -0.22
TRIM41-206	ENST00000514219	IQCF6	A8MYZ5	107 aa		13.7	□□□□□ -0.22
TRIM41-206	ENST00000514219	C19orf84	I3L1E1	186 aa		13.7	□□□□□ -0.22
TRIM41-206	ENST00000514219	TIMM8A	O60220	97 aa	Predicted RBP	13.7	□□□□□ -0.22
TRIM41-206	ENST00000514219	NRAS	P01111	189 aa		13.7	□□□□□ -0.22
TRIM41-206	ENST00000514219	NGF	P01138	241 aa		13.7	□□□□□ -0.22
TRIM41-206	ENST00000514219	ZNF250	P15622	560 aa		13.7	□□□□□ -0.22
TRIM41-206	ENST00000514219	IGFBP2	P18065	325 aa		13.7	□□□□□ -0.22
TRIM41-206	ENST00000514219	RAB3B	P20337	219 aa		13.7	□□□□□ -0.22
TRIM41-206	ENST00000514219	RORC	P51449	518 aa		13.7	□□□□□ -0.22
TRIM41-206	ENST00000514219	VBP1	P61758	197 aa		13.7	□□□□□ -0.22
TRIM41-206	ENST00000514219	NKX6-1	P78426	367 aa	Predicted RBP	13.7	□□□□□ -0.22
TRIM41-206	ENST00000514219	FAM189A2	Q15884	450 aa		13.7	□□□□□ -0.22
TRIM41-206	ENST00000514219	FAM209A	Q5JX71	171 aa		13.7	□□□□□ -0.22
TRIM41-206	ENST00000514219	KRT74	Q7RTS7	529 aa		13.7	□□□□□ -0.22
TRIM41-206	ENST00000514219	MYPOP	Q86VE0	399 aa	Predicted RBP	13.7	□□□□□ -0.22
TRIM41-206	ENST00000514219	DNAAF1	Q8NEP3	725 aa		13.7	□□□□□ -0.22
TRIM41-206	ENST00000514219	OR51A4	Q8NGJ6	313 aa		13.7	□□□□□ -0.22
TRIM41-206	ENST00000514219	OR2AE1	Q8NHA4	323 aa		13.7	□□□□□ -0.22
TRIM41-206	ENST00000514219	LINC01560	Q8TB33	94 aa		13.7	□□□□□ -0.22
TRIM41-206	ENST00000514219	KCTD12	Q96CX2	325 aa	Known RBP	13.7	□□□□□ -0.22
TRIM41-206	ENST00000514219	MARS2	Q96GW9	593 aa	Known RBP	13.7	□□□□□ -0.22
TRIM41-206	ENST00000514219	DIRC2	Q96SL1	478 aa		13.7	□□□□□ -0.22
TRIM41-206	ENST00000514219	CA10	Q9NS85	328 aa		13.7	□□□□□ -0.22
TRIM41-206	ENST00000514219	CCDC59	Q9P031	241 aa	Known RBP	13.7	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms