RNA–Protein interactions for RNA: ENST00000513452.5

CLDND1-227, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-227ENST00000513452 WDR13Q9H1Z4 485 aa8.44□□□□□ -1.06
CLDND1-227ENST00000513452 PNRC2Q9NPJ4 139 aaKnown RBP8.44□□□□□ -1.06
CLDND1-227ENST00000513452 ABCB10Q9NRK6 738 aa8.44□□□□□ -1.06
CLDND1-227ENST00000513452 IGLV1-36A0A0B4J1U3 117 aa8.43□□□□□ -1.06
CLDND1-227ENST00000513452 TMEM120BA0PK00 339 aa8.43□□□□□ -1.06
CLDND1-227ENST00000513452 ANKRD30BLA7E2S9 258 aa8.43□□□□□ -1.06
CLDND1-227ENST00000513452 F2RL2O00254 374 aa8.43□□□□□ -1.06
CLDND1-227ENST00000513452 CDIPTO14735 213 aa8.43□□□□□ -1.06
CLDND1-227ENST00000513452 ANGPT2O15123 496 aa8.43□□□□□ -1.06
CLDND1-227ENST00000513452 GLCEO94923 617 aa8.43□□□□□ -1.06
CLDND1-227ENST00000513452 NDUFB2O95178 105 aa8.43□□□□□ -1.06
CLDND1-227ENST00000513452 CRABP1P29762 137 aa8.43□□□□□ -1.06
CLDND1-227ENST00000513452 CDKN2AP42771 156 aaKnown RBP8.43□□□□□ -1.06
CLDND1-227ENST00000513452 GZMMP51124 257 aa8.43□□□□□ -1.06
CLDND1-227ENST00000513452 CAV3P56539 151 aa8.43□□□□□ -1.06
CLDND1-227ENST00000513452 NFYCQ13952 458 aa8.43□□□□□ -1.06
CLDND1-227ENST00000513452 LRRC23Q53EV4 343 aaPredicted RBP8.43□□□□□ -1.06
CLDND1-227ENST00000513452 TBPL2Q6SJ96 375 aa8.43□□□□□ -1.06
CLDND1-227ENST00000513452 ZNF730Q6ZMV8 503 aa8.43□□□□□ -1.06
CLDND1-227ENST00000513452 ZNF788Q6ZQV5 615 aa8.43□□□□□ -1.06
CLDND1-227ENST00000513452 CENPVQ7Z7K6 275 aaPredicted RBP8.43□□□□□ -1.06
CLDND1-227ENST00000513452 OFCC1Q8IZS5 231 aa8.43□□□□□ -1.06
CLDND1-227ENST00000513452 LZICQ8WZA0 190 aa8.43□□□□□ -1.06
CLDND1-227ENST00000513452 TFAP2CQ92754 450 aa8.43□□□□□ -1.06
CLDND1-227ENST00000513452 SPTSSAQ969W0 71 aa8.43□□□□□ -1.06
CLDND1-227ENST00000513452 MED30Q96HR3 178 aa8.43□□□□□ -1.06
CLDND1-227ENST00000513452 TPD52L3Q96J77 140 aa8.43□□□□□ -1.06
CLDND1-227ENST00000513452 RAB3IPQ96QF0 476 aaPredicted RBP8.43□□□□□ -1.06
CLDND1-227ENST00000513452 EBF4Q9BQW3 602 aa8.43□□□□□ -1.06
CLDND1-227ENST00000513452 FNDC11Q9BVV2 318 aa8.43□□□□□ -1.06
CLDND1-227ENST00000513452 DNTTIP1Q9H147 329 aa8.43□□□□□ -1.06
CLDND1-227ENST00000513452 HEXA-AS1Q9H8Q6 139 aa8.43□□□□□ -1.06
CLDND1-227ENST00000513452 PALMDQ9NP74 551 aa8.43□□□□□ -1.06
CLDND1-227ENST00000513452 PITPNC1Q9UKF7 332 aa8.43□□□□□ -1.06
CLDND1-227ENST00000513452 N6AMT1Q9Y5N5 214 aa8.43□□□□□ -1.06
CLDND1-227ENST00000513452 H0YHG0 523 aa8.42□□□□□ -1.06
CLDND1-227ENST00000513452 J3KTA2 159 aa8.42□□□□□ -1.06
CLDND1-227ENST00000513452 SIGLEC5O15389 551 aa8.42□□□□□ -1.06
CLDND1-227ENST00000513452 TIPRLO75663 272 aa8.42□□□□□ -1.06
CLDND1-227ENST00000513452 ZFPL1O95159 310 aa8.42□□□□□ -1.06
CLDND1-227ENST00000513452 IFNW1P05000 195 aa8.42□□□□□ -1.06
CLDND1-227ENST00000513452 SLC2A1P11166 492 aa8.42□□□□□ -1.06
CLDND1-227ENST00000513452 LYL1P12980 280 aa8.42□□□□□ -1.06
CLDND1-227ENST00000513452 IDH3AP50213 366 aa8.42□□□□□ -1.06
CLDND1-227ENST00000513452 DGCR2P98153 550 aa8.42□□□□□ -1.06
CLDND1-227ENST00000513452 TRAM2Q15035 370 aa8.42□□□□□ -1.06
CLDND1-227ENST00000513452 CYBRD1Q53TN4 286 aa8.42□□□□□ -1.06
CLDND1-227ENST00000513452 ETV3LQ6ZN32 361 aa8.42□□□□□ -1.06
CLDND1-227ENST00000513452 MBOAT2Q6ZWT7 520 aa8.42□□□□□ -1.06
CLDND1-227ENST00000513452 MRPL41Q8IXM3 137 aaKnown RBP8.42□□□□□ -1.06
CLDND1-227ENST00000513452 OR6V1Q8N148 313 aa8.42□□□□□ -1.06
CLDND1-227ENST00000513452 DPP10Q8N608 796 aa8.42□□□□□ -1.06
CLDND1-227ENST00000513452 TMEM185AQ8NFB2 350 aa8.42□□□□□ -1.06
CLDND1-227ENST00000513452 Q8NFD4 153 aa8.42□□□□□ -1.06
CLDND1-227ENST00000513452 OR4X2Q8NGF9 303 aa8.42□□□□□ -1.06
CLDND1-227ENST00000513452 ANGPTL6Q8NI99 470 aa8.42□□□□□ -1.06
CLDND1-227ENST00000513452 ZNF649Q9BS31 505 aa8.42□□□□□ -1.06
CLDND1-227ENST00000513452 PPP1R3EQ9H7J1 279 aa8.42□□□□□ -1.06
CLDND1-227ENST00000513452 SRA1Q9HD15 236 aaKnown RBP8.42□□□□□ -1.06
CLDND1-227ENST00000513452 NRIP3Q9NQ35 241 aa8.42□□□□□ -1.06
CLDND1-227ENST00000513452 C19orf12Q9NSK7 152 aa8.42□□□□□ -1.06
CLDND1-227ENST00000513452 CYB5R1Q9UHQ9 305 aa8.42□□□□□ -1.06
CLDND1-227ENST00000513452 IER3IP1Q9Y5U9 82 aa8.42□□□□□ -1.06
CLDND1-227ENST00000513452 A0A087WUU8 490 aa8.41□□□□□ -1.06
CLDND1-227ENST00000513452 IFNA14P01570 189 aa8.41□□□□□ -1.06
CLDND1-227ENST00000513452 HLA-DQA2P01906 255 aa8.41□□□□□ -1.06
CLDND1-227ENST00000513452 ACAA1P09110 424 aaPredicted RBP8.41□□□□□ -1.06
CLDND1-227ENST00000513452 TROVE2P10155 538 aaKnown RBP eCLIP8.41□□□□□ -1.06
CLDND1-227ENST00000513452 GNALP38405 381 aa8.41□□□□□ -1.06
CLDND1-227ENST00000513452 GABRA2P47869 451 aa8.41□□□□□ -1.06
CLDND1-227ENST00000513452 MXRA7P84157 204 aa8.41□□□□□ -1.06
CLDND1-227ENST00000513452 SSX2Q16385 188 aa8.41□□□□□ -1.06
CLDND1-227ENST00000513452 SLC36A3Q495N2 470 aa8.41□□□□□ -1.06
CLDND1-227ENST00000513452 TNFAIP8L3Q5GJ75 292 aa8.41□□□□□ -1.06
CLDND1-227ENST00000513452 C10orf99Q6UWK7 81 aa8.41□□□□□ -1.06
CLDND1-227ENST00000513452 DRAM2Q6UX65 266 aa8.41□□□□□ -1.06
CLDND1-227ENST00000513452 UNQ9370/PRO34162Q6UXP9 181 aa8.41□□□□□ -1.06
CLDND1-227ENST00000513452 ZNF782Q6ZMW2 699 aaPredicted RBP8.41□□□□□ -1.06
CLDND1-227ENST00000513452 TMPRSS11FQ6ZWK6 438 aa8.41□□□□□ -1.06
CLDND1-227ENST00000513452 CPLX4Q7Z7G2 160 aa8.41□□□□□ -1.06
CLDND1-227ENST00000513452 ZNRF1Q8ND25 227 aa8.41□□□□□ -1.06
CLDND1-227ENST00000513452 RPL3LQ92901 407 aaKnown RBP8.41□□□□□ -1.06
CLDND1-227ENST00000513452 FOXRED1Q96CU9 486 aaPredicted RBP8.41□□□□□ -1.06
CLDND1-227ENST00000513452 FAM46AQ96IP4 442 aaKnown RBP8.41□□□□□ -1.06
CLDND1-227ENST00000513452 GPX7Q96SL4 187 aaPredicted RBP8.41□□□□□ -1.06
CLDND1-227ENST00000513452 CCDC28BQ9BUN5 200 aa8.41□□□□□ -1.06
CLDND1-227ENST00000513452 MCRIP2Q9BUT9 160 aaKnown RBP8.41□□□□□ -1.06
CLDND1-227ENST00000513452 NSRP1Q9H0G5 558 aaKnown RBP8.41□□□□□ -1.06
CLDND1-227ENST00000513452 TLNRD1Q9H1K6 362 aa8.41□□□□□ -1.06
CLDND1-227ENST00000513452 OPA3Q9H6K4 179 aa8.41□□□□□ -1.06
CLDND1-227ENST00000513452 B9D1Q9UPM9 204 aa8.41□□□□□ -1.06
CLDND1-227ENST00000513452 SIGLEC7Q9Y286 467 aa8.41□□□□□ -1.06
CLDND1-227ENST00000513452 LSM4Q9Y4Z0 139 aaKnown RBP8.41□□□□□ -1.06
CLDND1-227ENST00000513452 SNX13Q9Y5W8 968 aa8.41□□□□□ -1.06
CLDND1-227ENST00000513452 FAM90A8PA6NJQ4 464 aa8.4□□□□□ -1.06
CLDND1-227ENST00000513452 OR2AT4A6NND4 320 aa8.4□□□□□ -1.06
CLDND1-227ENST00000513452 FFAR1O14842 300 aa8.4□□□□□ -1.06
CLDND1-227ENST00000513452 AKR7A2O43488 359 aa8.4□□□□□ -1.06
CLDND1-227ENST00000513452 XRCC2O43543 280 aa8.4□□□□□ -1.06
CLDND1-227ENST00000513452 JUNBP17275 347 aaPredicted RBP8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 255 ms