RNA–Protein interactions for RNA: ENST00000513346.5

TCOF1-211, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-211ENST00000513346 RANP62826 216 aaKnown RBP10.13□□□□□ -0.79
TCOF1-211ENST00000513346 RPL18Q07020 188 aaKnown RBP10.13□□□□□ -0.79
TCOF1-211ENST00000513346 C17orf67Q0P5P2 114 aa10.13□□□□□ -0.79
TCOF1-211ENST00000513346 SYT13Q7L8C5 426 aa10.13□□□□□ -0.79
TCOF1-211ENST00000513346 NECAP1Q8NC96 275 aa10.13□□□□□ -0.79
TCOF1-211ENST00000513346 CA5BP1Q8WTZ4 195 aa10.13□□□□□ -0.79
TCOF1-211ENST00000513346 FBXO17Q96EF6 278 aa10.13□□□□□ -0.79
TCOF1-211ENST00000513346 MS4A3Q96HJ5 214 aa10.13□□□□□ -0.79
TCOF1-211ENST00000513346 NUDT22Q9BRQ3 303 aa10.13□□□□□ -0.79
TCOF1-211ENST00000513346 MRPL22Q9NWU5 206 aaKnown RBP10.13□□□□□ -0.79
TCOF1-211ENST00000513346 ING1Q9UK53 422 aaPredicted RBP10.13□□□□□ -0.79
TCOF1-211ENST00000513346 WSB1Q9Y6I7 421 aa10.13□□□□□ -0.79
TCOF1-211ENST00000513346 G3V3Y1 287 aa10.13□□□□□ -0.79
TCOF1-211ENST00000513346 PPM1DO15297 605 aa10.13□□□□□ -0.79
TCOF1-211ENST00000513346 UTS2O95399 124 aa10.13□□□□□ -0.79
TCOF1-211ENST00000513346 HOXB9P17482 250 aaPredicted RBP10.13□□□□□ -0.79
TCOF1-211ENST00000513346 MISPQ8IVT2 679 aa10.13□□□□□ -0.79
TCOF1-211ENST00000513346 SDSLQ96GA7 329 aa10.13□□□□□ -0.79
TCOF1-211ENST00000513346 TMED7-TICAM2A0A0A6YYA0 188 aa10.12□□□□□ -0.79
TCOF1-211ENST00000513346 ARPC3O15145 178 aa10.12□□□□□ -0.79
TCOF1-211ENST00000513346 XRCC2O43543 280 aa10.12□□□□□ -0.79
TCOF1-211ENST00000513346 AKR7A3O95154 331 aa10.12□□□□□ -0.79
TCOF1-211ENST00000513346 GLI4P10075 376 aa10.12□□□□□ -0.79
TCOF1-211ENST00000513346 FPR2P25090 351 aa10.12□□□□□ -0.79
TCOF1-211ENST00000513346 ZNF528Q3MIS6 628 aa10.12□□□□□ -0.79
TCOF1-211ENST00000513346 LCN15Q6UWW0 184 aa10.12□□□□□ -0.79
TCOF1-211ENST00000513346 STT3BQ8TCJ2 826 aa10.12□□□□□ -0.79
TCOF1-211ENST00000513346 TLNRD1Q9H1K6 362 aa10.12□□□□□ -0.79
TCOF1-211ENST00000513346 PLK3Q9H4B4 646 aa10.12□□□□□ -0.79
TCOF1-211ENST00000513346 SH3BGRL2Q9UJC5 107 aa10.12□□□□□ -0.79
TCOF1-211ENST00000513346 TMED7Q9Y3B3 224 aa10.12□□□□□ -0.79
TCOF1-211ENST00000513346 PCDHGA1Q9Y5H4 931 aa10.12□□□□□ -0.79
TCOF1-211ENST00000513346 R4GMQ9 66 aa10.12□□□□□ -0.79
TCOF1-211ENST00000513346 ALOX12BO75342 701 aa10.12□□□□□ -0.79
TCOF1-211ENST00000513346 CD160O95971 181 aa10.12□□□□□ -0.79
TCOF1-211ENST00000513346 NOVA1P51513 510 aaKnown RBP10.12□□□□□ -0.79
TCOF1-211ENST00000513346 NAAAQ02083 359 aa10.12□□□□□ -0.79
TCOF1-211ENST00000513346 AGBL4Q5VU57 503 aa10.12□□□□□ -0.79
TCOF1-211ENST00000513346 KIRREL2Q6UWL6 708 aa10.12□□□□□ -0.79
TCOF1-211ENST00000513346 LINC00696Q6ZRV3 163 aa10.12□□□□□ -0.79
TCOF1-211ENST00000513346 BORCS7Q96B45 105 aa10.12□□□□□ -0.79
TCOF1-211ENST00000513346 ZNF775Q96BV0 537 aaPredicted RBP10.12□□□□□ -0.79
TCOF1-211ENST00000513346 FER1L6-AS2Q96M78 137 aa10.12□□□□□ -0.79
TCOF1-211ENST00000513346 NMES1Q9C002 83 aa10.12□□□□□ -0.79
TCOF1-211ENST00000513346 CHST6Q9GZX3 395 aa10.12□□□□□ -0.79
TCOF1-211ENST00000513346 RAB33BQ9H082 229 aa10.12□□□□□ -0.79
TCOF1-211ENST00000513346 MTCH2Q9Y6C9 303 aa10.12□□□□□ -0.79
TCOF1-211ENST00000513346 NBASA2RRP1 2371 aa10.12□□□□□ -0.79
TCOF1-211ENST00000513346 CCDC187A0A096LP49 1063 aa10.12□□□□□ -0.79
TCOF1-211ENST00000513346 TRBV23-1A0A0A0MS06 115 aa10.12□□□□□ -0.79
TCOF1-211ENST00000513346 OR7C1O76099 320 aaPredicted RBP10.12□□□□□ -0.79
TCOF1-211ENST00000513346 OR2A4O95047 310 aa10.12□□□□□ -0.79
TCOF1-211ENST00000513346 DBHP09172 617 aa10.12□□□□□ -0.79
TCOF1-211ENST00000513346 ST6GAL1P15907 406 aa10.12□□□□□ -0.79
TCOF1-211ENST00000513346 KCNAB1Q14722 419 aa10.12□□□□□ -0.79
TCOF1-211ENST00000513346 NSUN5P2Q63ZY6 315 aa10.12□□□□□ -0.79
TCOF1-211ENST00000513346 ANKRD9Q96BM1 317 aaPredicted RBP10.12□□□□□ -0.79
TCOF1-211ENST00000513346 C4orf45Q96LM5 186 aa10.12□□□□□ -0.79
TCOF1-211ENST00000513346 OR2A7Q96R45 310 aa10.12□□□□□ -0.79
TCOF1-211ENST00000513346 OR8B4Q96RC9 309 aa10.12□□□□□ -0.79
TCOF1-211ENST00000513346 SMIM7Q9BQ49 75 aa10.12□□□□□ -0.79
TCOF1-211ENST00000513346 NRSN2Q9GZP1 204 aa10.12□□□□□ -0.79
TCOF1-211ENST00000513346 OR51I2Q9H344 312 aa10.12□□□□□ -0.79
TCOF1-211ENST00000513346 FBXL17Q9UF56 701 aa10.12□□□□□ -0.79
TCOF1-211ENST00000513346 ZNF230Q9UIE0 474 aaPredicted RBP10.12□□□□□ -0.79
TCOF1-211ENST00000513346 SPTAN1Q13813 2472 aaKnown RBP10.12□□□□□ -0.79
TCOF1-211ENST00000513346 COL11A1P12107 1806 aaPredicted RBP10.12□□□□□ -0.79
TCOF1-211ENST00000513346 FIGNL2A6NMB9 653 aa10.11□□□□□ -0.79
TCOF1-211ENST00000513346 DNASE2O00115 360 aaPredicted RBP10.11□□□□□ -0.79
TCOF1-211ENST00000513346 MRPL33O75394 65 aaKnown RBP10.11□□□□□ -0.79
TCOF1-211ENST00000513346 GCH1P30793 250 aa10.11□□□□□ -0.79
TCOF1-211ENST00000513346 SLC25A1P53007 311 aa10.11□□□□□ -0.79
TCOF1-211ENST00000513346 IKZF1Q13422 519 aa10.11□□□□□ -0.79
TCOF1-211ENST00000513346 RAB31Q13636 194 aa10.11□□□□□ -0.79
TCOF1-211ENST00000513346 ENDOGQ14249 297 aaKnown RBP10.11□□□□□ -0.79
TCOF1-211ENST00000513346 ZNF66Q6ZN08 573 aa10.11□□□□□ -0.79
TCOF1-211ENST00000513346 ABHD6Q9BV23 337 aa10.11□□□□□ -0.79
TCOF1-211ENST00000513346 SERTAD4Q9NUC0 356 aa10.11□□□□□ -0.79
TCOF1-211ENST00000513346 RNF150Q9ULK6 438 aa10.11□□□□□ -0.79
TCOF1-211ENST00000513346 DMRT1Q9Y5R6 373 aa10.11□□□□□ -0.79
TCOF1-211ENST00000513346 A0A0B4J2E0 115 aa10.11□□□□□ -0.79
TCOF1-211ENST00000513346 A0A1B0GX12 115 aa10.11□□□□□ -0.79
TCOF1-211ENST00000513346 A8MVM7 634 aa10.11□□□□□ -0.79
TCOF1-211ENST00000513346 RECKO95980 971 aa10.11□□□□□ -0.79
TCOF1-211ENST00000513346 CEACAM5P06731 702 aa10.11□□□□□ -0.79
TCOF1-211ENST00000513346 NPSR1Q6W5P4 371 aa10.11□□□□□ -0.79
TCOF1-211ENST00000513346 Q6ZS52 159 aa10.11□□□□□ -0.79
TCOF1-211ENST00000513346 SLC25A42Q86VD7 318 aa10.11□□□□□ -0.79
TCOF1-211ENST00000513346 RPP25Q9BUL9 199 aaKnown RBP10.11□□□□□ -0.79
TCOF1-211ENST00000513346 NPDC1Q9NQX5 325 aaPredicted RBP10.11□□□□□ -0.79
TCOF1-211ENST00000513346 RYDENQ9NUL5 291 aaKnown RBP10.11□□□□□ -0.79
TCOF1-211ENST00000513346 KCNIP1Q9NZI2 227 aa10.11□□□□□ -0.79
TCOF1-211ENST00000513346 A0A1W2PPQ1 181 aa10.11□□□□□ -0.79
TCOF1-211ENST00000513346 LINC00587B1AMM8 73 aa10.11□□□□□ -0.79
TCOF1-211ENST00000513346 RAC2P15153 192 aa10.11□□□□□ -0.79
TCOF1-211ENST00000513346 ACKR1Q16570 336 aa10.11□□□□□ -0.79
TCOF1-211ENST00000513346 PNLIPRP3Q17RR3 467 aa10.11□□□□□ -0.79
TCOF1-211ENST00000513346 WDR38Q5JTN6 314 aa10.11□□□□□ -0.79
TCOF1-211ENST00000513346 TMEM215Q68D42 235 aa10.11□□□□□ -0.79
TCOF1-211ENST00000513346 NCR3LG1Q68D85 454 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms