RNA–Protein interactions for RNA: ENST00000513248.1

NUP54-212, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 531 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-212ENST00000513248 POMT1Q9Y6A1 747 aa2.99□□□□□ -1.93
NUP54-212ENST00000513248 CENPEQ02224 2701 aa2.99□□□□□ -1.93
NUP54-212ENST00000513248 LRBAP50851 2863 aa2.99□□□□□ -1.93
NUP54-212ENST00000513248 SVILO95425 2214 aa2.99□□□□□ -1.93
NUP54-212ENST00000513248 MYO7BQ6PIF6 2116 aa2.98□□□□□ -1.93
NUP54-212ENST00000513248 ICE1Q9Y2F5 2266 aa2.98□□□□□ -1.93
NUP54-212ENST00000513248 A0A1W2PRQ8 180 aa2.98□□□□□ -1.93
NUP54-212ENST00000513248 ZNF726A6NNF4 738 aa2.98□□□□□ -1.93
NUP54-212ENST00000513248 SRRM4A7MD48 611 aaKnown RBP2.98□□□□□ -1.93
NUP54-212ENST00000513248 A8MVM7 634 aa2.98□□□□□ -1.93
NUP54-212ENST00000513248 SLC1A7O00341 560 aa2.98□□□□□ -1.93
NUP54-212ENST00000513248 ABCD4O14678 606 aa2.98□□□□□ -1.93
NUP54-212ENST00000513248 AIM2O14862 343 aa2.98□□□□□ -1.93
NUP54-212ENST00000513248 ZNF208O43345 1280 aa2.98□□□□□ -1.93
NUP54-212ENST00000513248 OR2T1O43869 369 aa2.98□□□□□ -1.93
NUP54-212ENST00000513248 BCAS1O75363 584 aaPredicted RBP2.98□□□□□ -1.93
NUP54-212ENST00000513248 AKR7A3O95154 331 aa2.98□□□□□ -1.93
NUP54-212ENST00000513248 C1QCP02747 245 aa2.98□□□□□ -1.93
NUP54-212ENST00000513248 MT-ND2P03891 347 aa2.98□□□□□ -1.93
NUP54-212ENST00000513248 TFPTP0C1Z6 253 aa2.98□□□□□ -1.93
NUP54-212ENST00000513248 PNMTP11086 282 aa2.98□□□□□ -1.93
NUP54-212ENST00000513248 UMPSP11172 480 aa2.98□□□□□ -1.93
NUP54-212ENST00000513248 ZNF43P17038 809 aa2.98□□□□□ -1.93
NUP54-212ENST00000513248 PTNP21246 168 aa2.98□□□□□ -1.93
NUP54-212ENST00000513248 IGHV1-2P23083 117 aa2.98□□□□□ -1.93
NUP54-212ENST00000513248 AHCYP23526 432 aa2.98□□□□□ -1.93
NUP54-212ENST00000513248 IFNA8P32881 189 aa2.98□□□□□ -1.93
NUP54-212ENST00000513248 RPS5P46782 204 aaKnown RBP2.98□□□□□ -1.93
NUP54-212ENST00000513248 OR3A3P47888 321 aa2.98□□□□□ -1.93
NUP54-212ENST00000513248 FABP6P51161 128 aa2.98□□□□□ -1.93
NUP54-212ENST00000513248 ATP4BP51164 291 aa2.98□□□□□ -1.93
NUP54-212ENST00000513248 DSCR10P59022 87 aa2.98□□□□□ -1.93
NUP54-212ENST00000513248 PRPS1P60891 318 aa2.98□□□□□ -1.93
NUP54-212ENST00000513248 HOXC5Q00444 222 aa2.98□□□□□ -1.93
NUP54-212ENST00000513248 CDK6Q00534 326 aa2.98□□□□□ -1.93
NUP54-212ENST00000513248 CHRNB3Q05901 458 aa2.98□□□□□ -1.93
NUP54-212ENST00000513248 BSPH1Q075Z2 132 aa2.98□□□□□ -1.93
NUP54-212ENST00000513248 SCN1BQ07699 218 aa2.98□□□□□ -1.93
NUP54-212ENST00000513248 FUT5Q11128 374 aa2.98□□□□□ -1.93
NUP54-212ENST00000513248 CYLC2Q14093 348 aaPredicted RBP2.98□□□□□ -1.93
NUP54-212ENST00000513248 PDK3Q15120 406 aa2.98□□□□□ -1.93
NUP54-212ENST00000513248 MAPRE2Q15555 327 aa2.98□□□□□ -1.93
NUP54-212ENST00000513248 CARTPTQ16568 116 aa2.98□□□□□ -1.93
NUP54-212ENST00000513248 TTMPQ5BVD1 217 aa2.98□□□□□ -1.93
NUP54-212ENST00000513248 TIMM23BQ5SRD1 257 aa2.98□□□□□ -1.93
NUP54-212ENST00000513248 NCMAPQ5T1S8 102 aa2.98□□□□□ -1.93
NUP54-212ENST00000513248 C1orf140Q5VVS0 124 aa2.98□□□□□ -1.93
NUP54-212ENST00000513248 AGAP6Q5VW22 663 aa2.98□□□□□ -1.93
NUP54-212ENST00000513248 CARD17Q5XLA6 110 aa2.98□□□□□ -1.93
NUP54-212ENST00000513248 REEP3Q6NUK4 255 aa2.98□□□□□ -1.93
NUP54-212ENST00000513248 PAQR6Q6TCH4 344 aa2.98□□□□□ -1.93
NUP54-212ENST00000513248 PIGWQ7Z7B1 504 aa2.98□□□□□ -1.93
NUP54-212ENST00000513248 DHDDSQ86SQ9 333 aa2.98□□□□□ -1.93
NUP54-212ENST00000513248 P2RY8Q86VZ1 359 aa2.98□□□□□ -1.93
NUP54-212ENST00000513248 TCEANCQ8N8B7 351 aa2.98□□□□□ -1.93
NUP54-212ENST00000513248 SMYD1Q8NB12 490 aa2.98□□□□□ -1.93
NUP54-212ENST00000513248 NHLRC2Q8NBF2 726 aa2.98□□□□□ -1.93
NUP54-212ENST00000513248 AQP11Q8NBQ7 271 aa2.98□□□□□ -1.93
NUP54-212ENST00000513248 UXS1Q8NBZ7 420 aa2.98□□□□□ -1.93
NUP54-212ENST00000513248 WFDC11Q8NEX6 87 aa2.98□□□□□ -1.93
NUP54-212ENST00000513248 OR9K2Q8NGE7 335 aa2.98□□□□□ -1.93
NUP54-212ENST00000513248 OR10G7Q8NGN6 311 aa2.98□□□□□ -1.93
NUP54-212ENST00000513248 DNAJA4Q8WW22 397 aaPredicted RBP2.98□□□□□ -1.93
NUP54-212ENST00000513248 CKAP2Q8WWK9 683 aa2.98□□□□□ -1.93
NUP54-212ENST00000513248 GTF2H4Q92759 462 aa2.98□□□□□ -1.93
NUP54-212ENST00000513248 HIST1H2ACQ93077 130 aa2.98□□□□□ -1.93
NUP54-212ENST00000513248 SLC38A4Q969I6 547 aa2.98□□□□□ -1.93
NUP54-212ENST00000513248 SH3GL1Q99961 368 aa2.98□□□□□ -1.93
NUP54-212ENST00000513248 ECSITQ9BQ95 431 aa2.98□□□□□ -1.93
NUP54-212ENST00000513248 ATG101Q9BSB4 218 aa2.98□□□□□ -1.93
NUP54-212ENST00000513248 DCTN5Q9BTE1 182 aa2.98□□□□□ -1.93
NUP54-212ENST00000513248 VIPAS39Q9H9C1 493 aa2.98□□□□□ -1.93
NUP54-212ENST00000513248 B3GAT2Q9NPZ5 323 aa2.98□□□□□ -1.93
NUP54-212ENST00000513248 MRGBPQ9NV56 204 aa2.98□□□□□ -1.93
NUP54-212ENST00000513248 MGAT4BQ9UQ53 548 aa2.98□□□□□ -1.93
NUP54-212ENST00000513248 RASD1Q9Y272 281 aa2.98□□□□□ -1.93
NUP54-212ENST00000513248 F8P00451 2351 aa2.98□□□□□ -1.93
NUP54-212ENST00000513248 FN1P02751 2386 aaKnown RBP2.98□□□□□ -1.93
NUP54-212ENST00000513248 MTORP42345 2549 aa2.98□□□□□ -1.93
NUP54-212ENST00000513248 ZGRF1Q86YA3 2104 aa2.98□□□□□ -1.93
NUP54-212ENST00000513248 TRAV36DV7A0A075B6V5 113 aa2.97□□□□□ -1.93
NUP54-212ENST00000513248 IGHV4-30-2A0A087WSY4 118 aa2.97□□□□□ -1.93
NUP54-212ENST00000513248 A0A1B0GWA3 101 aa2.97□□□□□ -1.93
NUP54-212ENST00000513248 TRIM64A6NGJ6 449 aa2.97□□□□□ -1.93
NUP54-212ENST00000513248 TRIM64BA6NI03 449 aa2.97□□□□□ -1.93
NUP54-212ENST00000513248 OR6C65A6NJZ3 312 aa2.97□□□□□ -1.93
NUP54-212ENST00000513248 OR5H1A6NKK0 313 aa2.97□□□□□ -1.93
NUP54-212ENST00000513248 CPSF4LA6NMK7 179 aaKnown RBP2.97□□□□□ -1.93
NUP54-212ENST00000513248 ZNF716A6NP11 495 aa2.97□□□□□ -1.93
NUP54-212ENST00000513248 C11orf98E9PRG8 122 aa2.97□□□□□ -1.93
NUP54-212ENST00000513248 FAAHO00519 579 aa2.97□□□□□ -1.93
NUP54-212ENST00000513248 MRASO14807 208 aa2.97□□□□□ -1.93
NUP54-212ENST00000513248 ST8SIA3O43173 380 aa2.97□□□□□ -1.93
NUP54-212ENST00000513248 EDF1O60869 148 aaKnown RBP2.97□□□□□ -1.93
NUP54-212ENST00000513248 RAMP1O60894 148 aa2.97□□□□□ -1.93
NUP54-212ENST00000513248 GMNNO75496 209 aa2.97□□□□□ -1.93
NUP54-212ENST00000513248 GCM2O75603 506 aaPredicted RBP2.97□□□□□ -1.93
NUP54-212ENST00000513248 VAMP5O95183 116 aa2.97□□□□□ -1.93
NUP54-212ENST00000513248 LGI1O95970 557 aa2.97□□□□□ -1.93
NUP54-212ENST00000513248 IFNA14P01570 189 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms