RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 RFX4Q33E94 735 aa7.42□□□□□ -1.22
NUP54-211ENST00000512151 CD276Q5ZPR3 534 aa7.42□□□□□ -1.22
NUP54-211ENST00000512151 CD300LDQ6UXZ3 194 aa7.42□□□□□ -1.22
NUP54-211ENST00000512151 RASSF6Q6ZTQ3 369 aa7.42□□□□□ -1.22
NUP54-211ENST00000512151 NANOGNBQ7Z5D8 188 aa7.42□□□□□ -1.22
NUP54-211ENST00000512151 OR5AS1Q8N127 324 aa7.42□□□□□ -1.22
NUP54-211ENST00000512151 ATG16L2Q8NAA4 619 aa7.42□□□□□ -1.22
NUP54-211ENST00000512151 RORBQ92753 470 aa7.42□□□□□ -1.22
NUP54-211ENST00000512151 TFAP2CQ92754 450 aa7.42□□□□□ -1.22
NUP54-211ENST00000512151 MCHR2Q969V1 340 aa7.42□□□□□ -1.22
NUP54-211ENST00000512151 ZNF566Q969W8 418 aa7.42□□□□□ -1.22
NUP54-211ENST00000512151 C4orf45Q96LM5 186 aa7.42□□□□□ -1.22
NUP54-211ENST00000512151 CNBD2Q96M20 576 aa7.42□□□□□ -1.22
NUP54-211ENST00000512151 MRPS26Q9BYN8 205 aaKnown RBP7.42□□□□□ -1.22
NUP54-211ENST00000512151 OR52D1Q9H346 318 aa7.42□□□□□ -1.22
NUP54-211ENST00000512151 RANBP3Q9H6Z4 567 aaPredicted RBP7.42□□□□□ -1.22
NUP54-211ENST00000512151 CCNB1IP1Q9NPC3 277 aa7.42□□□□□ -1.22
NUP54-211ENST00000512151 USE1Q9NZ43 259 aa7.42□□□□□ -1.22
NUP54-211ENST00000512151 DNAJB11Q9UBS4 358 aa7.42□□□□□ -1.22
NUP54-211ENST00000512151 UGT2A1Q9Y4X1 527 aa7.42□□□□□ -1.22
NUP54-211ENST00000512151 MAB21L2Q9Y586 359 aa7.42□□□□□ -1.22
NUP54-211ENST00000512151 IGKV1D-43A0A0B4J1Z2 117 aa7.41□□□□□ -1.22
NUP54-211ENST00000512151 RBMY1BA6NDE4 496 aaKnown RBP7.41□□□□□ -1.22
NUP54-211ENST00000512151 RBMY1EA6NEQ0 496 aaKnown RBP7.41□□□□□ -1.22
NUP54-211ENST00000512151 F5H5P2 479 aa7.41□□□□□ -1.22
NUP54-211ENST00000512151 MLNRO43193 412 aa7.41□□□□□ -1.22
NUP54-211ENST00000512151 ANGPTL7O43827 346 aa7.41□□□□□ -1.22
NUP54-211ENST00000512151 HIST1H2ABP04908 130 aa7.41□□□□□ -1.22
NUP54-211ENST00000512151 ALPLP05186 524 aa7.41□□□□□ -1.22
NUP54-211ENST00000512151 CHRM2P08172 466 aa7.41□□□□□ -1.22
NUP54-211ENST00000512151 CCDC159P0C7I6 412 aa7.41□□□□□ -1.22
NUP54-211ENST00000512151 RBMY1DP0C7P1 496 aaKnown RBP7.41□□□□□ -1.22
NUP54-211ENST00000512151 OSMP13725 252 aa7.41□□□□□ -1.22
NUP54-211ENST00000512151 LMO1P25800 156 aa7.41□□□□□ -1.22
NUP54-211ENST00000512151 PAX6P26367 422 aa7.41□□□□□ -1.22
NUP54-211ENST00000512151 EPHA2P29317 976 aa7.41□□□□□ -1.22
NUP54-211ENST00000512151 NPY4RP50391 375 aa7.41□□□□□ -1.22
NUP54-211ENST00000512151 ALDH3A2P51648 485 aa7.41□□□□□ -1.22
NUP54-211ENST00000512151 ERVK-25P63136 954 aa7.41□□□□□ -1.22
NUP54-211ENST00000512151 APOFQ13790 326 aa7.41□□□□□ -1.22
NUP54-211ENST00000512151 HIST3H3Q16695 136 aa7.41□□□□□ -1.22
NUP54-211ENST00000512151 ZNF181Q2M3W8 571 aa7.41□□□□□ -1.22
NUP54-211ENST00000512151 SLC36A3Q495N2 470 aa7.41□□□□□ -1.22
NUP54-211ENST00000512151 ALG10Q5BKT4 473 aa7.41□□□□□ -1.22
NUP54-211ENST00000512151 BTN2A1Q7KYR7 527 aa7.41□□□□□ -1.22
NUP54-211ENST00000512151 HIST3H2AQ7L7L0 130 aa7.41□□□□□ -1.22
NUP54-211ENST00000512151 PNLDC1Q8NA58 520 aaKnown RBP7.41□□□□□ -1.22
NUP54-211ENST00000512151 OR4Q3Q8NH05 313 aa7.41□□□□□ -1.22
NUP54-211ENST00000512151 HIST1H2ACQ93077 130 aa7.41□□□□□ -1.22
NUP54-211ENST00000512151 HAVCR1Q96D42 359 aa7.41□□□□□ -1.22
NUP54-211ENST00000512151 SLC25A44Q96H78 314 aaPredicted RBP7.41□□□□□ -1.22
NUP54-211ENST00000512151 AJUBAQ96IF1 538 aa7.41□□□□□ -1.22
NUP54-211ENST00000512151 OR2H1Q9GZK4 316 aa7.41□□□□□ -1.22
NUP54-211ENST00000512151 KRCC1Q9NPI7 259 aaPredicted RBP7.41□□□□□ -1.22
NUP54-211ENST00000512151 SIRT7Q9NRC8 400 aa7.41□□□□□ -1.22
NUP54-211ENST00000512151 IL20Q9NYY1 176 aa7.41□□□□□ -1.22
NUP54-211ENST00000512151 NDUFA13Q9P0J0 144 aa7.41□□□□□ -1.22
NUP54-211ENST00000512151 STARD10Q9Y365 291 aa7.41□□□□□ -1.22
NUP54-211ENST00000512151 LSM4Q9Y4Z0 139 aaKnown RBP7.41□□□□□ -1.22
NUP54-211ENST00000512151 SMIM31A0A1B0GVY4 71 aa7.4□□□□□ -1.22
NUP54-211ENST00000512151 IMPA2O14732 288 aa7.4□□□□□ -1.22
NUP54-211ENST00000512151 RNF13O43567 381 aa7.4□□□□□ -1.22
NUP54-211ENST00000512151 ZFPL1O95159 310 aa7.4□□□□□ -1.22
NUP54-211ENST00000512151 NDUFB2O95178 105 aa7.4□□□□□ -1.22
NUP54-211ENST00000512151 OR6A2O95222 327 aa7.4□□□□□ -1.22
NUP54-211ENST00000512151 SLC2A10O95528 541 aa7.4□□□□□ -1.22
NUP54-211ENST00000512151 GSTM3P21266 225 aa7.4□□□□□ -1.22
NUP54-211ENST00000512151 MYF6P23409 242 aa7.4□□□□□ -1.22
NUP54-211ENST00000512151 SAA4P35542 130 aa7.4□□□□□ -1.22
NUP54-211ENST00000512151 RPL5P46777 297 aaKnown RBP7.4□□□□□ -1.22
NUP54-211ENST00000512151 GSK3AP49840 483 aa7.4□□□□□ -1.22
NUP54-211ENST00000512151 CRISP1P54107 249 aa7.4□□□□□ -1.22
NUP54-211ENST00000512151 CTXN1P60606 82 aa7.4□□□□□ -1.22
NUP54-211ENST00000512151 CDK5Q00535 292 aa7.4□□□□□ -1.22
NUP54-211ENST00000512151 ZIK1Q3SY52 487 aaPredicted RBP7.4□□□□□ -1.22
NUP54-211ENST00000512151 ANKDD1AQ495B1 522 aa7.4□□□□□ -1.22
NUP54-211ENST00000512151 CDONQ4KMG0 1287 aa7.4□□□□□ -1.22
NUP54-211ENST00000512151 CLEC12AQ5QGZ9 265 aa7.4□□□□□ -1.22
NUP54-211ENST00000512151 TMEM236Q5W0B7 351 aa7.4□□□□□ -1.22
NUP54-211ENST00000512151 SMARCD3Q6STE5 483 aa7.4□□□□□ -1.22
NUP54-211ENST00000512151 ARL9Q6T311 187 aa7.4□□□□□ -1.22
NUP54-211ENST00000512151 UNQ6126/PRO20091Q6UXV3 157 aa7.4□□□□□ -1.22
NUP54-211ENST00000512151 FAM122BQ7Z309 247 aa7.4□□□□□ -1.22
NUP54-211ENST00000512151 CLDN22Q8N7P3 220 aa7.4□□□□□ -1.22
NUP54-211ENST00000512151 SDR9C7Q8NEX9 313 aa7.4□□□□□ -1.22
NUP54-211ENST00000512151 FANK1Q8TC84 345 aa7.4□□□□□ -1.22
NUP54-211ENST00000512151 GPX7Q96SL4 187 aaPredicted RBP7.4□□□□□ -1.22
NUP54-211ENST00000512151 MBOAT4Q96T53 435 aa7.4□□□□□ -1.22
NUP54-211ENST00000512151 DDOQ99489 341 aa7.4□□□□□ -1.22
NUP54-211ENST00000512151 SSX3Q99909 188 aa7.4□□□□□ -1.22
NUP54-211ENST00000512151 TSSK6Q9BXA6 273 aa7.4□□□□□ -1.22
NUP54-211ENST00000512151 WNT10AQ9GZT5 417 aa7.4□□□□□ -1.22
NUP54-211ENST00000512151 SIAEQ9HAT2 523 aa7.4□□□□□ -1.22
NUP54-211ENST00000512151 ELOVL3Q9HB03 270 aa7.4□□□□□ -1.22
NUP54-211ENST00000512151 PALMDQ9NP74 551 aa7.4□□□□□ -1.22
NUP54-211ENST00000512151 NRIP3Q9NQ35 241 aa7.4□□□□□ -1.22
NUP54-211ENST00000512151 PAPOLBQ9NRJ5 636 aaKnown RBP7.4□□□□□ -1.22
NUP54-211ENST00000512151 INIPQ9NRY2 104 aa7.4□□□□□ -1.22
NUP54-211ENST00000512151 KRT84Q9NSB2 600 aa7.4□□□□□ -1.22
NUP54-211ENST00000512151 ERVK-18Q9QC07 812 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms