RNA–Protein interactions for RNA: ENST00000511586.5

PDLIM5-215, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-215ENST00000511586 R4GMQ9 66 aa6.05□□□□□ -1.44
PDLIM5-215ENST00000511586 ZNF469Q96JG9 3925 aaPredicted RBP6.05□□□□□ -1.44
PDLIM5-215ENST00000511586 LRRC30A6NM36 301 aa6.04□□□□□ -1.44
PDLIM5-215ENST00000511586 J3QRE1 110 aa6.04□□□□□ -1.44
PDLIM5-215ENST00000511586 CD5LO43866 347 aa6.04□□□□□ -1.44
PDLIM5-215ENST00000511586 MRPS14O60783 128 aaKnown RBP6.04□□□□□ -1.44
PDLIM5-215ENST00000511586 SRSF10O75494 262 aaKnown RBP6.04□□□□□ -1.44
PDLIM5-215ENST00000511586 WBP4O75554 376 aaKnown RBP6.04□□□□□ -1.44
PDLIM5-215ENST00000511586 MTRF1O75570 445 aaKnown RBP6.04□□□□□ -1.44
PDLIM5-215ENST00000511586 RPP14O95059 124 aaKnown RBP6.04□□□□□ -1.44
PDLIM5-215ENST00000511586 FADS2O95864 444 aaKnown RBP6.04□□□□□ -1.44
PDLIM5-215ENST00000511586 CST4P01036 141 aa6.04□□□□□ -1.44
PDLIM5-215ENST00000511586 TTRP02766 147 aa6.04□□□□□ -1.44
PDLIM5-215ENST00000511586 IGHV4-31P0DP07 118 aa6.04□□□□□ -1.44
PDLIM5-215ENST00000511586 GNALP38405 381 aa6.04□□□□□ -1.44
PDLIM5-215ENST00000511586 GATA4P43694 442 aa6.04□□□□□ -1.44
PDLIM5-215ENST00000511586 MAP2K3P46734 347 aa6.04□□□□□ -1.44
PDLIM5-215ENST00000511586 SLC35A2P78381 396 aa6.04□□□□□ -1.44
PDLIM5-215ENST00000511586 MVKQ03426 396 aa6.04□□□□□ -1.44
PDLIM5-215ENST00000511586 ZNF85Q03923 595 aa6.04□□□□□ -1.44
PDLIM5-215ENST00000511586 MFGE8Q08431 387 aaPredicted RBP6.04□□□□□ -1.44
PDLIM5-215ENST00000511586 RAB40BQ12829 278 aa6.04□□□□□ -1.44
PDLIM5-215ENST00000511586 MAB21L1Q13394 359 aa6.04□□□□□ -1.44
PDLIM5-215ENST00000511586 SMN1Q16637 294 aaKnown RBP6.04□□□□□ -1.44
PDLIM5-215ENST00000511586 ZNF181Q2M3W8 571 aa6.04□□□□□ -1.44
PDLIM5-215ENST00000511586 KLHL22Q53GT1 634 aa6.04□□□□□ -1.44
PDLIM5-215ENST00000511586 AVPI1Q5T686 147 aa6.04□□□□□ -1.44
PDLIM5-215ENST00000511586 BCL2L15Q5TBC7 163 aa6.04□□□□□ -1.44
PDLIM5-215ENST00000511586 LIPNQ5VXI9 398 aa6.04□□□□□ -1.44
PDLIM5-215ENST00000511586 LAIR2Q6ISS4 152 aa6.04□□□□□ -1.44
PDLIM5-215ENST00000511586 Q71RC1 249 aaPredicted RBP6.04□□□□□ -1.44
PDLIM5-215ENST00000511586 FAM220AQ7Z4H9 259 aa6.04□□□□□ -1.44
PDLIM5-215ENST00000511586 MOGAT3Q86VF5 341 aa6.04□□□□□ -1.44
PDLIM5-215ENST00000511586 COMMD2Q86X83 199 aa6.04□□□□□ -1.44
PDLIM5-215ENST00000511586 EGFL6Q8IUX8 553 aa6.04□□□□□ -1.44
PDLIM5-215ENST00000511586 ELMOD2Q8IZ81 293 aa6.04□□□□□ -1.44
PDLIM5-215ENST00000511586 C1orf87Q8N0U7 546 aa6.04□□□□□ -1.44
PDLIM5-215ENST00000511586 STX19Q8N4C7 294 aa6.04□□□□□ -1.44
PDLIM5-215ENST00000511586 SEMA6DQ8NFY4 1073 aa6.04□□□□□ -1.44
PDLIM5-215ENST00000511586 OR8S1Q8NH09 359 aa6.04□□□□□ -1.44
PDLIM5-215ENST00000511586 CLDND2Q8NHS1 167 aa6.04□□□□□ -1.44
PDLIM5-215ENST00000511586 OR51E1Q8TCB6 317 aa6.04□□□□□ -1.44
PDLIM5-215ENST00000511586 APH1BQ8WW43 257 aa6.04□□□□□ -1.44
PDLIM5-215ENST00000511586 ERGIC1Q969X5 290 aa6.04□□□□□ -1.44
PDLIM5-215ENST00000511586 LGALS12Q96DT0 336 aa6.04□□□□□ -1.44
PDLIM5-215ENST00000511586 MRPL48Q96GC5 212 aaKnown RBP6.04□□□□□ -1.44
PDLIM5-215ENST00000511586 SIGLEC11Q96RL6 698 aa6.04□□□□□ -1.44
PDLIM5-215ENST00000511586 AMBNQ9NP70 447 aa6.04□□□□□ -1.44
PDLIM5-215ENST00000511586 ABCB9Q9NP78 766 aa6.04□□□□□ -1.44
PDLIM5-215ENST00000511586 G6PC2Q9NQR9 355 aa6.04□□□□□ -1.44
PDLIM5-215ENST00000511586 GPR84Q9NQS5 396 aa6.04□□□□□ -1.44
PDLIM5-215ENST00000511586 INPP5EQ9NRR6 644 aa6.04□□□□□ -1.44
PDLIM5-215ENST00000511586 MRPS18AQ9NVS2 196 aaKnown RBP6.04□□□□□ -1.44
PDLIM5-215ENST00000511586 C14orf119Q9NWQ9 140 aa6.04□□□□□ -1.44
PDLIM5-215ENST00000511586 ERVK-18Q9QC07 812 aa6.04□□□□□ -1.44
PDLIM5-215ENST00000511586 GNG8Q9UK08 70 aa6.04□□□□□ -1.44
PDLIM5-215ENST00000511586 OR52A1Q9UKL2 312 aa6.04□□□□□ -1.44
PDLIM5-215ENST00000511586 WIPI2Q9Y4P8 454 aa6.04□□□□□ -1.44
PDLIM5-215ENST00000511586 NPTNQ9Y639 398 aa6.04□□□□□ -1.44
PDLIM5-215ENST00000511586 VPS13CQ709C8 3753 aa6.04□□□□□ -1.44
PDLIM5-215ENST00000511586 ACANP16112 2415 aa6.04□□□□□ -1.44
PDLIM5-215ENST00000511586 MAP1AP78559 2803 aaPredicted RBP6.03□□□□□ -1.44
PDLIM5-215ENST00000511586 IGHV3-64DA0A0J9YX35 117 aa6.03□□□□□ -1.44
PDLIM5-215ENST00000511586 LOC100289279A0A1B0GTE1 492 aa6.03□□□□□ -1.44
PDLIM5-215ENST00000511586 IRGMA1A4Y4 181 aa6.03□□□□□ -1.44
PDLIM5-215ENST00000511586 EFCAB10A6NFE3 127 aa6.03□□□□□ -1.44
PDLIM5-215ENST00000511586 ANXA2P2A6NMY6 339 aa6.03□□□□□ -1.44
PDLIM5-215ENST00000511586 TMEM178BH3BS89 294 aa6.03□□□□□ -1.44
PDLIM5-215ENST00000511586 WNT9BO14905 357 aa6.03□□□□□ -1.44
PDLIM5-215ENST00000511586 PTBP3O95758 552 aaKnown RBP6.03□□□□□ -1.44
PDLIM5-215ENST00000511586 IGLV3-1P01715 115 aa6.03□□□□□ -1.44
PDLIM5-215ENST00000511586 IGHV2-70P01814 119 aa6.03□□□□□ -1.44
PDLIM5-215ENST00000511586 MT-ND2P03891 347 aa6.03□□□□□ -1.44
PDLIM5-215ENST00000511586 GRPP07492 148 aa6.03□□□□□ -1.44
PDLIM5-215ENST00000511586 HTR1AP08908 422 aa6.03□□□□□ -1.44
PDLIM5-215ENST00000511586 IRF2P14316 349 aa6.03□□□□□ -1.44
PDLIM5-215ENST00000511586 JUNBP17275 347 aaPredicted RBP6.03□□□□□ -1.44
PDLIM5-215ENST00000511586 ACKR3P25106 362 aa6.03□□□□□ -1.44
PDLIM5-215ENST00000511586 ACTA2P62736 377 aa6.03□□□□□ -1.44
PDLIM5-215ENST00000511586 ACTG2P63267 376 aa6.03□□□□□ -1.44
PDLIM5-215ENST00000511586 KRTAP1-1Q07627 177 aa6.03□□□□□ -1.44
PDLIM5-215ENST00000511586 RIPPLY1Q0D2K3 151 aa6.03□□□□□ -1.44
PDLIM5-215ENST00000511586 GALEQ14376 348 aa6.03□□□□□ -1.44
PDLIM5-215ENST00000511586 CNPY1Q3B7I2 92 aa6.03□□□□□ -1.44
PDLIM5-215ENST00000511586 CDONQ4KMG0 1287 aa6.03□□□□□ -1.44
PDLIM5-215ENST00000511586 TP53I3Q53FA7 332 aa6.03□□□□□ -1.44
PDLIM5-215ENST00000511586 KRT74Q7RTS7 529 aa6.03□□□□□ -1.44
PDLIM5-215ENST00000511586 PRSS48Q7RTY5 328 aa6.03□□□□□ -1.44
PDLIM5-215ENST00000511586 CLVS1Q8IUQ0 354 aaPredicted RBP6.03□□□□□ -1.44
PDLIM5-215ENST00000511586 SPARTQ8N0X7 666 aa6.03□□□□□ -1.44
PDLIM5-215ENST00000511586 OR11L1Q8NGX0 322 aa6.03□□□□□ -1.44
PDLIM5-215ENST00000511586 ZNF420Q8TAQ5 688 aaPredicted RBP6.03□□□□□ -1.44
PDLIM5-215ENST00000511586 PIGCQ92535 297 aa6.03□□□□□ -1.44
PDLIM5-215ENST00000511586 SGCDQ92629 289 aa6.03□□□□□ -1.44
PDLIM5-215ENST00000511586 FCGR1BQ92637 280 aa6.03□□□□□ -1.44
PDLIM5-215ENST00000511586 RORBQ92753 470 aa6.03□□□□□ -1.44
PDLIM5-215ENST00000511586 DVL3Q92997 716 aaPredicted RBP6.03□□□□□ -1.44
PDLIM5-215ENST00000511586 MUL1Q969V5 352 aa6.03□□□□□ -1.44
PDLIM5-215ENST00000511586 PPP1R14AQ96A00 147 aa6.03□□□□□ -1.44
PDLIM5-215ENST00000511586 RAB39BQ96DA2 213 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms