RNA–Protein interactions for RNA: ENST00000511040.5

DDX41-212, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-212ENST00000511040 TMEM160Q9NX00 188 aa11.73□□□□□ -0.53
DDX41-212ENST00000511040 OR52A1Q9UKL2 312 aa11.73□□□□□ -0.53
DDX41-212ENST00000511040 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.73□□□□□ -0.53
DDX41-212ENST00000511040 PPIAL4EA0A075B759 164 aa11.72□□□□□ -0.53
DDX41-212ENST00000511040 A0A0U1RQV5 110 aa11.72□□□□□ -0.53
DDX41-212ENST00000511040 hCG_1807616A0A1W2PRN6 198 aa11.72□□□□□ -0.53
DDX41-212ENST00000511040 METTL15A6NJ78 407 aa11.72□□□□□ -0.53
DDX41-212ENST00000511040 CEACAM18A8MTB9 384 aa11.72□□□□□ -0.53
DDX41-212ENST00000511040 PPIAL4DF5H284 164 aa11.72□□□□□ -0.53
DDX41-212ENST00000511040 H3BSH0 61 aa11.72□□□□□ -0.53
DDX41-212ENST00000511040 DLGAP1O14490 977 aa11.72□□□□□ -0.53
DDX41-212ENST00000511040 TTRP02766 147 aa11.72□□□□□ -0.53
DDX41-212ENST00000511040 PPIAL4FP0DN26 164 aa11.72□□□□□ -0.53
DDX41-212ENST00000511040 GABRB1P18505 474 aa11.72□□□□□ -0.53
DDX41-212ENST00000511040 ZFP36P26651 326 aaKnown RBP11.72□□□□□ -0.53
DDX41-212ENST00000511040 CD80P33681 288 aa11.72□□□□□ -0.53
DDX41-212ENST00000511040 CSNK2BP67870 215 aa11.72□□□□□ -0.53
DDX41-212ENST00000511040 MZT1Q08AG7 82 aa11.72□□□□□ -0.53
DDX41-212ENST00000511040 ODF4Q2M2E3 257 aa11.72□□□□□ -0.53
DDX41-212ENST00000511040 ZNF181Q2M3W8 571 aa11.72□□□□□ -0.53
DDX41-212ENST00000511040 TP53I3Q53FA7 332 aa11.72□□□□□ -0.53
DDX41-212ENST00000511040 DMRTC1Q5HYR2 192 aa11.72□□□□□ -0.53
DDX41-212ENST00000511040 SLC25A30Q5SVS4 291 aa11.72□□□□□ -0.53
DDX41-212ENST00000511040 MEDAGQ5VYS4 303 aa11.72□□□□□ -0.53
DDX41-212ENST00000511040 KLBQ86Z14 1044 aa11.72□□□□□ -0.53
DDX41-212ENST00000511040 C1orf87Q8N0U7 546 aa11.72□□□□□ -0.53
DDX41-212ENST00000511040 SPERTQ8NA61 448 aa11.72□□□□□ -0.53
DDX41-212ENST00000511040 FGF23Q9GZV9 251 aaPredicted RBP11.72□□□□□ -0.53
DDX41-212ENST00000511040 PATZ1Q9HBE1 687 aaKnown RBP11.72□□□□□ -0.53
DDX41-212ENST00000511040 TMEM165Q9HC07 324 aa11.72□□□□□ -0.53
DDX41-212ENST00000511040 AMBNQ9NP70 447 aa11.72□□□□□ -0.53
DDX41-212ENST00000511040 G6PC2Q9NQR9 355 aa11.72□□□□□ -0.53
DDX41-212ENST00000511040 SMPD3Q9NY59 655 aaPredicted RBP11.72□□□□□ -0.53
DDX41-212ENST00000511040 RNF7Q9UBF6 113 aa11.72□□□□□ -0.53
DDX41-212ENST00000511040 LPAR3Q9UBY5 353 aa11.72□□□□□ -0.53
DDX41-212ENST00000511040 NUFIP1Q9UHK0 495 aaKnown RBP11.72□□□□□ -0.53
DDX41-212ENST00000511040 SLC22A13Q9Y226 551 aa11.72□□□□□ -0.53
DDX41-212ENST00000511040 PPIAL4AQ9Y536 164 aa11.72□□□□□ -0.53
DDX41-212ENST00000511040 ARHGAP32A7KAX9 2087 aa11.72□□□□□ -0.53
DDX41-212ENST00000511040 TRAV20A0A0B4J274 112 aa11.71□□□□□ -0.53
DDX41-212ENST00000511040 ANXA2P2A6NMY6 339 aa11.71□□□□□ -0.53
DDX41-212ENST00000511040 KIAA1324LA8MWY0 1029 aaPredicted RBP11.71□□□□□ -0.53
DDX41-212ENST00000511040 P2RY10O00398 339 aa11.71□□□□□ -0.53
DDX41-212ENST00000511040 PTBP3O95758 552 aaKnown RBP11.71□□□□□ -0.53
DDX41-212ENST00000511040 CST4P01036 141 aa11.71□□□□□ -0.53
DDX41-212ENST00000511040 HNF1AP20823 631 aa11.71□□□□□ -0.53
DDX41-212ENST00000511040 THBS2P35442 1172 aa11.71□□□□□ -0.53
DDX41-212ENST00000511040 PSMB10P40306 273 aa11.71□□□□□ -0.53
DDX41-212ENST00000511040 MAP2K3P46734 347 aa11.71□□□□□ -0.53
DDX41-212ENST00000511040 ZNF91Q05481 1191 aa11.71□□□□□ -0.53
DDX41-212ENST00000511040 ZNF684Q5T5D7 378 aa11.71□□□□□ -0.53
DDX41-212ENST00000511040 LIPNQ5VXI9 398 aa11.71□□□□□ -0.53
DDX41-212ENST00000511040 SFRP4Q6FHJ7 346 aaPredicted RBP11.71□□□□□ -0.53
DDX41-212ENST00000511040 FAHD2BQ6P2I3 314 aaPredicted RBP11.71□□□□□ -0.53
DDX41-212ENST00000511040 KCTD8Q6ZWB6 473 aa11.71□□□□□ -0.53
DDX41-212ENST00000511040 MUC20Q8N307 709 aaPredicted RBP11.71□□□□□ -0.53
DDX41-212ENST00000511040 FTMTQ8N4E7 242 aa11.71□□□□□ -0.53
DDX41-212ENST00000511040 ZNF555Q8NEP9 628 aa11.71□□□□□ -0.53
DDX41-212ENST00000511040 OR1M1Q8NGA1 313 aa11.71□□□□□ -0.53
DDX41-212ENST00000511040 RHOXF1Q8NHV9 184 aa11.71□□□□□ -0.53
DDX41-212ENST00000511040 CYGBQ8WWM9 190 aa11.71□□□□□ -0.53
DDX41-212ENST00000511040 ERGIC1Q969X5 290 aa11.71□□□□□ -0.53
DDX41-212ENST00000511040 LGALS12Q96DT0 336 aa11.71□□□□□ -0.53
DDX41-212ENST00000511040 FAHD2AQ96GK7 314 aa11.71□□□□□ -0.53
DDX41-212ENST00000511040 MICU1Q9BPX6 476 aa11.71□□□□□ -0.53
DDX41-212ENST00000511040 TMEM246Q9BRR3 403 aa11.71□□□□□ -0.53
DDX41-212ENST00000511040 ZNF391Q9UJN7 358 aa11.71□□□□□ -0.53
DDX41-212ENST00000511040 GNG8Q9UK08 70 aa11.71□□□□□ -0.53
DDX41-212ENST00000511040 SNX5Q9Y5X3 404 aa11.71□□□□□ -0.53
DDX41-212ENST00000511040 IGHV3OR15-7A0A075B7D8 119 aa11.7□□□□□ -0.54
DDX41-212ENST00000511040 ZNF816-ZNF321PA0A0X1KG74 233 aa11.7□□□□□ -0.54
DDX41-212ENST00000511040 DAPL1A0PJW8 107 aa11.7□□□□□ -0.54
DDX41-212ENST00000511040 A6NIN4 97 aa11.7□□□□□ -0.54
DDX41-212ENST00000511040 F5H0A9 414 aaPredicted RBP11.7□□□□□ -0.54
DDX41-212ENST00000511040 C3orf80F5H4A9 247 aa11.7□□□□□ -0.54
DDX41-212ENST00000511040 SLC16A6O15403 523 aa11.7□□□□□ -0.54
DDX41-212ENST00000511040 PHF1O43189 567 aaPredicted RBP11.7□□□□□ -0.54
DDX41-212ENST00000511040 CLIC3O95833 236 aa11.7□□□□□ -0.54
DDX41-212ENST00000511040 IGLV3-1P01715 115 aa11.7□□□□□ -0.54
DDX41-212ENST00000511040 FAM157CP0CG43 387 aa11.7□□□□□ -0.54
DDX41-212ENST00000511040 RPS2P15880 293 aaKnown RBP11.7□□□□□ -0.54
DDX41-212ENST00000511040 FAHP16930 419 aa11.7□□□□□ -0.54
DDX41-212ENST00000511040 EGR1P18146 543 aa11.7□□□□□ -0.54
DDX41-212ENST00000511040 SRD5A1P18405 259 aa11.7□□□□□ -0.54
DDX41-212ENST00000511040 SRP14P37108 136 aaKnown RBP11.7□□□□□ -0.54
DDX41-212ENST00000511040 IL5RAQ01344 420 aa11.7□□□□□ -0.54
DDX41-212ENST00000511040 ZNF154Q13106 437 aa11.7□□□□□ -0.54
DDX41-212ENST00000511040 SNCBQ16143 134 aa11.7□□□□□ -0.54
DDX41-212ENST00000511040 ZNF404Q494X3 552 aa11.7□□□□□ -0.54
DDX41-212ENST00000511040 CEP78Q5JTW2 689 aa11.7□□□□□ -0.54
DDX41-212ENST00000511040 LYPD2Q6UXB3 125 aa11.7□□□□□ -0.54
DDX41-212ENST00000511040 THAP5Q7Z6K1 395 aa11.7□□□□□ -0.54
DDX41-212ENST00000511040 C11orf53Q8IXP5 236 aa11.7□□□□□ -0.54
DDX41-212ENST00000511040 ZDHHC23Q8IYP9 409 aa11.7□□□□□ -0.54
DDX41-212ENST00000511040 ELMOD2Q8IZ81 293 aa11.7□□□□□ -0.54
DDX41-212ENST00000511040 PLPP7Q8NBV4 271 aa11.7□□□□□ -0.54
DDX41-212ENST00000511040 SEMA6DQ8NFY4 1073 aa11.7□□□□□ -0.54
DDX41-212ENST00000511040 LRRC29Q8WV35 223 aa11.7□□□□□ -0.54
DDX41-212ENST00000511040 APH1BQ8WW43 257 aa11.7□□□□□ -0.54
DDX41-212ENST00000511040 HPSE2Q8WWQ2 592 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms