RNA–Protein interactions for RNA: ENST00000510377.5

USP38-202, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 1 (best) BASIC

Gene USP38, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-202ENST00000510377 CLEC18BQ6UXF7 455 aa13.28□□□□□ -0.28
USP38-202ENST00000510377 CATSPERDQ86XM0 798 aa13.28□□□□□ -0.28
USP38-202ENST00000510377 ELSPBP1Q96BH3 223 aa13.28□□□□□ -0.28
USP38-202ENST00000510377 PHYHIPLQ96FC7 376 aa13.28□□□□□ -0.28
USP38-202ENST00000510377 PRRG4Q9BZD6 226 aa13.28□□□□□ -0.28
USP38-202ENST00000510377 PIGLQ9Y2B2 252 aa13.28□□□□□ -0.28
USP38-202ENST00000510377 KCNK7Q9Y2U2 307 aa13.28□□□□□ -0.28
USP38-202ENST00000510377 TRAV14DV4A0A0A6YYC5 116 aa13.27□□□□□ -0.28
USP38-202ENST00000510377 C2CD4DB7Z1M9 353 aa13.27□□□□□ -0.28
USP38-202ENST00000510377 UMAD1C9J7I0 102 aa13.27□□□□□ -0.28
USP38-202ENST00000510377 EGR4Q05215 589 aa13.27□□□□□ -0.28
USP38-202ENST00000510377 BRICD5Q6PL45 260 aa13.27□□□□□ -0.28
USP38-202ENST00000510377 TFAP2EQ6VUC0 442 aa13.27□□□□□ -0.28
USP38-202ENST00000510377 ZNF695Q8IW36 515 aa13.27□□□□□ -0.28
USP38-202ENST00000510377 C20orf196Q8IYI0 205 aa13.27□□□□□ -0.28
USP38-202ENST00000510377 OR5T1Q8NG75 326 aa13.27□□□□□ -0.28
USP38-202ENST00000510377 OR5L2Q8NGL0 311 aa13.27□□□□□ -0.28
USP38-202ENST00000510377 MITD1Q8WV92 249 aa13.27□□□□□ -0.28
USP38-202ENST00000510377 ASB13Q8WXK3 278 aa13.27□□□□□ -0.28
USP38-202ENST00000510377 PIK3IP1Q96FE7 263 aa13.27□□□□□ -0.28
USP38-202ENST00000510377 MMP26Q9NRE1 261 aa13.27□□□□□ -0.28
USP38-202ENST00000510377 A0A1W2PQF6 199 aa13.27□□□□□ -0.29
USP38-202ENST00000510377 PLPP3O14495 311 aa13.27□□□□□ -0.29
USP38-202ENST00000510377 ZNF728P0DKX0 622 aa13.27□□□□□ -0.29
USP38-202ENST00000510377 LAP3P28838 519 aa13.27□□□□□ -0.29
USP38-202ENST00000510377 IKZF1Q13422 519 aa13.27□□□□□ -0.29
USP38-202ENST00000510377 PCK2Q16822 640 aa13.27□□□□□ -0.29
USP38-202ENST00000510377 MICBQ29980 383 aa13.27□□□□□ -0.29
USP38-202ENST00000510377 TMPPEQ6ZT21 453 aa13.27□□□□□ -0.29
USP38-202ENST00000510377 LIN37Q96GY3 246 aaPredicted RBP13.27□□□□□ -0.29
USP38-202ENST00000510377 KIRREL1Q96J84 757 aa13.27□□□□□ -0.29
USP38-202ENST00000510377 MRPL22Q9NWU5 206 aaKnown RBP13.27□□□□□ -0.29
USP38-202ENST00000510377 CEP250Q9BV73 2442 aa13.27□□□□□ -0.29
USP38-202ENST00000510377 DNASE2O00115 360 aaPredicted RBP13.27□□□□□ -0.29
USP38-202ENST00000510377 MBTPS2O43462 519 aa13.27□□□□□ -0.29
USP38-202ENST00000510377 NR2C1P13056 603 aa13.27□□□□□ -0.29
USP38-202ENST00000510377 FUT7Q11130 342 aa13.27□□□□□ -0.29
USP38-202ENST00000510377 AKR1C8PQ5T2L2 129 aa13.27□□□□□ -0.29
USP38-202ENST00000510377 OR2I1PQ8NGU4 316 aa13.27□□□□□ -0.29
USP38-202ENST00000510377 USB1Q9BQ65 265 aaKnown RBP13.27□□□□□ -0.29
USP38-202ENST00000510377 ZNF426Q9BUY5 554 aa13.27□□□□□ -0.29
USP38-202ENST00000510377 ALX4Q9H161 411 aaPredicted RBP13.27□□□□□ -0.29
USP38-202ENST00000510377 WDR13Q9H1Z4 485 aa13.27□□□□□ -0.29
USP38-202ENST00000510377 SLC7A11Q9UPY5 501 aa13.27□□□□□ -0.29
USP38-202ENST00000510377 TMEM184BQ9Y519 407 aaPredicted RBP13.27□□□□□ -0.29
USP38-202ENST00000510377 SLC37A1P57057 533 aa13.26□□□□□ -0.29
USP38-202ENST00000510377 STT3BQ8TCJ2 826 aa13.26□□□□□ -0.29
USP38-202ENST00000510377 RXFP4Q8TDU9 374 aa13.26□□□□□ -0.29
USP38-202ENST00000510377 AMDHD2Q9Y303 409 aa13.26□□□□□ -0.29
USP38-202ENST00000510377 ARG1P05089 322 aa13.26□□□□□ -0.29
USP38-202ENST00000510377 GUSBP08236 651 aa13.26□□□□□ -0.29
USP38-202ENST00000510377 NME1P15531 152 aaKnown RBP13.26□□□□□ -0.29
USP38-202ENST00000510377 BCKDHBP21953 392 aa13.26□□□□□ -0.29
USP38-202ENST00000510377 CHATP28329 748 aa13.26□□□□□ -0.29
USP38-202ENST00000510377 ID4P47928 161 aa13.26□□□□□ -0.29
USP38-202ENST00000510377 UBE2KP61086 200 aa13.26□□□□□ -0.29
USP38-202ENST00000510377 FZD2Q14332 565 aa13.26□□□□□ -0.29
USP38-202ENST00000510377 MIDNQ504T8 468 aa13.26□□□□□ -0.29
USP38-202ENST00000510377 ALKBH2Q6NS38 261 aa13.26□□□□□ -0.29
USP38-202ENST00000510377 FAM24BQ8N5W8 94 aa13.26□□□□□ -0.29
USP38-202ENST00000510377 PTPMT1Q8WUK0 201 aaPredicted RBP13.26□□□□□ -0.29
USP38-202ENST00000510377 SFT2D1Q8WV19 159 aa13.26□□□□□ -0.29
USP38-202ENST00000510377 CDX2Q99626 313 aaPredicted RBP13.26□□□□□ -0.29
USP38-202ENST00000510377 OR5AC2Q9NZP5 309 aa13.26□□□□□ -0.29
USP38-202ENST00000510377 PADI1Q9ULC6 663 aa13.26□□□□□ -0.29
USP38-202ENST00000510377 KPTNQ9Y664 436 aa13.26□□□□□ -0.29
USP38-202ENST00000510377 HEATR5AQ86XA9 2040 aa13.26□□□□□ -0.29
USP38-202ENST00000510377 HIST1H1DP16402 221 aaKnown RBP13.26□□□□□ -0.29
USP38-202ENST00000510377 KIAA0141Q14154 515 aaPredicted RBP13.26□□□□□ -0.29
USP38-202ENST00000510377 WDSUB1Q8N9V3 476 aa13.26□□□□□ -0.29
USP38-202ENST00000510377 DTWD2Q8NBA8 298 aa13.26□□□□□ -0.29
USP38-202ENST00000510377 GPBAR1Q8TDU6 330 aa13.26□□□□□ -0.29
USP38-202ENST00000510377 PIGCQ92535 297 aa13.26□□□□□ -0.29
USP38-202ENST00000510377 MCHR2Q969V1 340 aa13.26□□□□□ -0.29
USP38-202ENST00000510377 HIST1H2AAQ96QV6 131 aa13.26□□□□□ -0.29
USP38-202ENST00000510377 ULBP2Q9BZM5 246 aa13.26□□□□□ -0.29
USP38-202ENST00000510377 LOC101059948A0A1B0GTJ6 334 aa13.25□□□□□ -0.29
USP38-202ENST00000510377 BGLAPP02818 100 aa13.25□□□□□ -0.29
USP38-202ENST00000510377 FABP9Q0Z7S8 132 aa13.25□□□□□ -0.29
USP38-202ENST00000510377 MFAP5Q13361 173 aa13.25□□□□□ -0.29
USP38-202ENST00000510377 HAGHQ16775 308 aa13.25□□□□□ -0.29
USP38-202ENST00000510377 C9orf135Q5VTT2 229 aa13.25□□□□□ -0.29
USP38-202ENST00000510377 TMEM104Q8NE00 496 aa13.25□□□□□ -0.29
USP38-202ENST00000510377 KLHDC3Q9BQ90 382 aa13.25□□□□□ -0.29
USP38-202ENST00000510377 IGHV3-15A0A0B4J1V0 119 aa13.25□□□□□ -0.29
USP38-202ENST00000510377 TP53I11O14683 189 aa13.25□□□□□ -0.29
USP38-202ENST00000510377 ZNF217O75362 1048 aa13.25□□□□□ -0.29
USP38-202ENST00000510377 CNOT4O95628 575 aaKnown RBP13.25□□□□□ -0.29
USP38-202ENST00000510377 AFF3P51826 1226 aaKnown RBP13.25□□□□□ -0.29
USP38-202ENST00000510377 IGSF11Q5DX21 431 aa13.25□□□□□ -0.29
USP38-202ENST00000510377 PRR18Q8N4B5 295 aa13.25□□□□□ -0.29
USP38-202ENST00000510377 MFRPQ9BY79 579 aa13.25□□□□□ -0.29
USP38-202ENST00000510377 FBXL17Q9UF56 701 aa13.25□□□□□ -0.29
USP38-202ENST00000510377 MMP24Q9Y5R2 645 aa13.25□□□□□ -0.29
USP38-202ENST00000510377 SFT2D2O95562 160 aa13.25□□□□□ -0.29
USP38-202ENST00000510377 ZBTB25P24278 435 aa13.25□□□□□ -0.29
USP38-202ENST00000510377 F2RL1P55085 397 aa13.25□□□□□ -0.29
USP38-202ENST00000510377 RPS18P62269 152 aaKnown RBP13.25□□□□□ -0.29
USP38-202ENST00000510377 ARL6IP1Q15041 203 aa13.25□□□□□ -0.29
USP38-202ENST00000510377 SLC22A8Q8TCC7 542 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms