RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 IGHV1-69DA0A0B4J2H0 117 aa12.73□□□□□ -0.37
TPM3-219ENST00000509409 A0A1B0GUS0 222 aa12.73□□□□□ -0.37
TPM3-219ENST00000509409 GLCEO94923 617 aa12.73□□□□□ -0.37
TPM3-219ENST00000509409 CST1P01037 141 aa12.73□□□□□ -0.37
TPM3-219ENST00000509409 IGHV1-69P01742 117 aa12.73□□□□□ -0.37
TPM3-219ENST00000509409 MELTFP08582 738 aa12.73□□□□□ -0.37
TPM3-219ENST00000509409 GSK3AP49840 483 aa12.73□□□□□ -0.37
TPM3-219ENST00000509409 RAG2P55895 527 aa12.73□□□□□ -0.37
TPM3-219ENST00000509409 GMFBP60983 142 aa12.73□□□□□ -0.37
TPM3-219ENST00000509409 SNCBQ16143 134 aa12.73□□□□□ -0.37
TPM3-219ENST00000509409 TREML4Q6UXN2 200 aa12.73□□□□□ -0.37
TPM3-219ENST00000509409 C17orf107Q6ZR85 190 aa12.73□□□□□ -0.37
TPM3-219ENST00000509409 SLC36A1Q7Z2H8 476 aa12.73□□□□□ -0.37
TPM3-219ENST00000509409 C11orf53Q8IXP5 236 aa12.73□□□□□ -0.37
TPM3-219ENST00000509409 TMEM86BQ8N661 226 aa12.73□□□□□ -0.37
TPM3-219ENST00000509409 CSNK2A3Q8NEV1 391 aa12.73□□□□□ -0.37
TPM3-219ENST00000509409 THEM6Q8WUY1 208 aa12.73□□□□□ -0.37
TPM3-219ENST00000509409 RNF133Q8WVZ7 376 aa12.73□□□□□ -0.37
TPM3-219ENST00000509409 FEVQ99581 238 aa12.73□□□□□ -0.37
TPM3-219ENST00000509409 PAPOLGQ9BWT3 736 aaKnown RBP12.73□□□□□ -0.37
TPM3-219ENST00000509409 CHIAQ9BZP6 476 aa12.73□□□□□ -0.37
TPM3-219ENST00000509409 ACOXLQ9NUZ1 547 aa12.73□□□□□ -0.37
TPM3-219ENST00000509409 ONECUT1Q9UBC0 465 aa12.73□□□□□ -0.37
TPM3-219ENST00000509409 KAAG1Q9UBP8 84 aa12.73□□□□□ -0.37
TPM3-219ENST00000509409 PRPF19Q9UMS4 504 aaKnown RBP12.73□□□□□ -0.37
TPM3-219ENST00000509409 RHBDD3Q9Y3P4 386 aa12.73□□□□□ -0.37
TPM3-219ENST00000509409 MMP24Q9Y5R2 645 aa12.73□□□□□ -0.37
TPM3-219ENST00000509409 hCG_38984A0A1B0GV85 526 aa12.72□□□□□ -0.37
TPM3-219ENST00000509409 ANXA2P2A6NMY6 339 aa12.72□□□□□ -0.37
TPM3-219ENST00000509409 PRR23D1E9PI22 279 aaPredicted RBP12.72□□□□□ -0.37
TPM3-219ENST00000509409 CDIPTO14735 213 aa12.72□□□□□ -0.37
TPM3-219ENST00000509409 TIPRLO75663 272 aa12.72□□□□□ -0.37
TPM3-219ENST00000509409 PRR23D2P0DMB1 279 aaPredicted RBP12.72□□□□□ -0.37
TPM3-219ENST00000509409 RAP2AP10114 183 aa12.72□□□□□ -0.37
TPM3-219ENST00000509409 MUC1P15941 1255 aaPredicted RBP12.72□□□□□ -0.37
TPM3-219ENST00000509409 CSNK2BP67870 215 aa12.72□□□□□ -0.37
TPM3-219ENST00000509409 C11orf91Q3C1V1 193 aa12.72□□□□□ -0.37
TPM3-219ENST00000509409 KLHL12Q53G59 568 aa12.72□□□□□ -0.37
TPM3-219ENST00000509409 CD300LDQ6UXZ3 194 aa12.72□□□□□ -0.37
TPM3-219ENST00000509409 KCTD8Q6ZWB6 473 aa12.72□□□□□ -0.37
TPM3-219ENST00000509409 TIGD4Q8IY51 512 aa12.72□□□□□ -0.37
TPM3-219ENST00000509409 FTMTQ8N4E7 242 aa12.72□□□□□ -0.37
TPM3-219ENST00000509409 SSMEM1Q8WWF3 244 aa12.72□□□□□ -0.37
TPM3-219ENST00000509409 CCT8L2Q96SF2 557 aa12.72□□□□□ -0.37
TPM3-219ENST00000509409 CHID1Q9BWS9 393 aa12.72□□□□□ -0.37
TPM3-219ENST00000509409 SIRPDQ9H106 197 aa12.72□□□□□ -0.37
TPM3-219ENST00000509409 PPP1R3EQ9H7J1 279 aa12.72□□□□□ -0.37
TPM3-219ENST00000509409 DNAJB11Q9UBS4 358 aa12.72□□□□□ -0.37
TPM3-219ENST00000509409 RPUSD1Q9UJJ7 312 aaKnown RBP12.72□□□□□ -0.37
TPM3-219ENST00000509409 FAM96BQ9Y3D0 163 aa12.72□□□□□ -0.37
TPM3-219ENST00000509409 POMT1Q9Y6A1 747 aa12.72□□□□□ -0.37
TPM3-219ENST00000509409 KCNAB3O43448 404 aa12.71□□□□□ -0.37
TPM3-219ENST00000509409 NDUFB3O43676 98 aa12.71□□□□□ -0.37
TPM3-219ENST00000509409 LYNP07948 512 aa12.71□□□□□ -0.37
TPM3-219ENST00000509409 CALB2P22676 271 aa12.71□□□□□ -0.37
TPM3-219ENST00000509409 OPRL1P41146 370 aa12.71□□□□□ -0.37
TPM3-219ENST00000509409 ELF3P78545 371 aaPredicted RBP12.71□□□□□ -0.37
TPM3-219ENST00000509409 IL5RAQ01344 420 aa12.71□□□□□ -0.37
TPM3-219ENST00000509409 IKZF1Q13422 519 aa12.71□□□□□ -0.37
TPM3-219ENST00000509409 GK3PQ14409 553 aa12.71□□□□□ -0.37
TPM3-219ENST00000509409 GINS1Q14691 196 aa12.71□□□□□ -0.37
TPM3-219ENST00000509409 WDR38Q5JTN6 314 aa12.71□□□□□ -0.37
TPM3-219ENST00000509409 OLFML2AQ68BL7 652 aa12.71□□□□□ -0.37
TPM3-219ENST00000509409 WDR82Q6UXN9 313 aa12.71□□□□□ -0.37
TPM3-219ENST00000509409 WDR86Q86TI4 376 aa12.71□□□□□ -0.37
TPM3-219ENST00000509409 FGFRL1Q8N441 504 aa12.71□□□□□ -0.37
TPM3-219ENST00000509409 OR5T2Q8NGG2 359 aa12.71□□□□□ -0.37
TPM3-219ENST00000509409 PIGCQ92535 297 aa12.71□□□□□ -0.37
TPM3-219ENST00000509409 CCDC124Q96CT7 223 aaKnown RBP12.71□□□□□ -0.37
TPM3-219ENST00000509409 SEH1LQ96EE3 360 aa12.71□□□□□ -0.37
TPM3-219ENST00000509409 HIST1H2AAQ96QV6 131 aa12.71□□□□□ -0.37
TPM3-219ENST00000509409 AMELYQ99218 206 aa12.71□□□□□ -0.37
TPM3-219ENST00000509409 RTL8AQ9BWD3 113 aa12.71□□□□□ -0.37
TPM3-219ENST00000509409 RGCCQ9H4X1 137 aa12.71□□□□□ -0.37
TPM3-219ENST00000509409 ZNF556Q9HAH1 456 aa12.71□□□□□ -0.37
TPM3-219ENST00000509409 C1RLQ9NZP8 487 aa12.71□□□□□ -0.37
TPM3-219ENST00000509409 PDP1Q9P0J1 537 aaPredicted RBP12.71□□□□□ -0.37
TPM3-219ENST00000509409 ZNF319Q9P2F9 582 aa12.71□□□□□ -0.37
TPM3-219ENST00000509409 KPTNQ9Y664 436 aa12.71□□□□□ -0.37
TPM3-219ENST00000509409 A0A0U1RQK1 487 aa12.7□□□□□ -0.38
TPM3-219ENST00000509409 A0A1B0GW55 424 aa12.7□□□□□ -0.38
TPM3-219ENST00000509409 ZNF850A8MQ14 1090 aa12.7□□□□□ -0.38
TPM3-219ENST00000509409 ACOT8O14734 319 aa12.7□□□□□ -0.38
TPM3-219ENST00000509409 FCN3O75636 299 aa12.7□□□□□ -0.38
TPM3-219ENST00000509409 HMGN1P05114 100 aa12.7□□□□□ -0.38
TPM3-219ENST00000509409 DUX4L2P0CJ85 424 aa12.7□□□□□ -0.38
TPM3-219ENST00000509409 DUX4L3P0CJ86 424 aa12.7□□□□□ -0.38
TPM3-219ENST00000509409 DUX4L4P0CJ87 422 aa12.7□□□□□ -0.38
TPM3-219ENST00000509409 DUX4L5P0CJ88 424 aa12.7□□□□□ -0.38
TPM3-219ENST00000509409 DUX4L6P0CJ89 424 aa12.7□□□□□ -0.38
TPM3-219ENST00000509409 DUX4L7P0CJ90 424 aa12.7□□□□□ -0.38
TPM3-219ENST00000509409 SRSF4Q08170 494 aaKnown RBP12.7□□□□□ -0.38
TPM3-219ENST00000509409 CDONQ4KMG0 1287 aa12.7□□□□□ -0.38
TPM3-219ENST00000509409 LRRC10Q5BKY1 277 aa12.7□□□□□ -0.38
TPM3-219ENST00000509409 PLBD1Q6P4A8 553 aa12.7□□□□□ -0.38
TPM3-219ENST00000509409 DUX4L9Q6RFH8 374 aaPredicted RBP12.7□□□□□ -0.38
TPM3-219ENST00000509409 RHOUQ7L0Q8 258 aa12.7□□□□□ -0.38
TPM3-219ENST00000509409 PRSS45Q7RTY3 260 aa12.7□□□□□ -0.38
TPM3-219ENST00000509409 VMO1Q7Z5L0 202 aa12.7□□□□□ -0.38
TPM3-219ENST00000509409 CMTM4Q8IZR5 234 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms