RNA–Protein interactions for RNA: ENST00000508930.1

TRIM41-204, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best)

Gene TRIM41, Length 3,834 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-204ENST00000508930 PLCXD2Q0VAA5 305 aa12.72□□□□□ -0.37
TRIM41-204ENST00000508930 RHEBQ15382 184 aa12.72□□□□□ -0.37
TRIM41-204ENST00000508930 SULF2Q8IWU5 870 aa12.72□□□□□ -0.37
TRIM41-204ENST00000508930 OR13G1Q8NGZ3 307 aa12.72□□□□□ -0.37
TRIM41-204ENST00000508930 ZNF519Q8TB69 540 aa12.72□□□□□ -0.37
TRIM41-204ENST00000508930 FAM213BQ8TBF2 198 aa12.72□□□□□ -0.37
TRIM41-204ENST00000508930 EMG1Q92979 244 aaKnown RBP12.72□□□□□ -0.37
TRIM41-204ENST00000508930 SLAMF6Q96DU3 332 aa12.72□□□□□ -0.37
TRIM41-204ENST00000508930 LPAR5Q9H1C0 372 aa12.72□□□□□ -0.37
TRIM41-204ENST00000508930 UFSP2Q9NUQ7 469 aa12.72□□□□□ -0.37
TRIM41-204ENST00000508930 VSX1Q9NZR4 365 aaPredicted RBP12.72□□□□□ -0.37
TRIM41-204ENST00000508930 PCOLCE2Q9UKZ9 415 aa12.72□□□□□ -0.37
TRIM41-204ENST00000508930 ZNF708P17019 499 aa12.72□□□□□ -0.37
TRIM41-204ENST00000508930 BCKDHBP21953 392 aa12.72□□□□□ -0.37
TRIM41-204ENST00000508930 TAS2R46P59540 309 aa12.72□□□□□ -0.37
TRIM41-204ENST00000508930 POU3F1Q03052 451 aaPredicted RBP12.72□□□□□ -0.37
TRIM41-204ENST00000508930 VAX1Q5SQQ9 334 aa12.72□□□□□ -0.37
TRIM41-204ENST00000508930 SSX9Q7RTT3 188 aa12.72□□□□□ -0.37
TRIM41-204ENST00000508930 SCARF2Q96GP6 870 aaPredicted RBP12.72□□□□□ -0.37
TRIM41-204ENST00000508930 GAS2L1Q99501 681 aaPredicted RBP12.72□□□□□ -0.37
TRIM41-204ENST00000508930 MAP3K3Q99759 626 aa12.72□□□□□ -0.37
TRIM41-204ENST00000508930 ADAM19Q9H013 955 aa12.72□□□□□ -0.37
TRIM41-204ENST00000508930 RHBDD3Q9Y3P4 386 aa12.72□□□□□ -0.37
TRIM41-204ENST00000508930 DMRT1Q9Y5R6 373 aa12.72□□□□□ -0.37
TRIM41-204ENST00000508930 ZNF729A6NN14 1252 aaPredicted RBP12.71□□□□□ -0.37
TRIM41-204ENST00000508930 A8MVM7 634 aa12.71□□□□□ -0.37
TRIM41-204ENST00000508930 C1QL1O75973 258 aa12.71□□□□□ -0.37
TRIM41-204ENST00000508930 ISG15P05161 165 aa12.71□□□□□ -0.37
TRIM41-204ENST00000508930 HOXB2P14652 356 aa12.71□□□□□ -0.37
TRIM41-204ENST00000508930 PDZD11Q5EBL8 140 aa12.71□□□□□ -0.37
TRIM41-204ENST00000508930 C19orf47Q8N9M1 422 aaKnown RBP12.71□□□□□ -0.37
TRIM41-204ENST00000508930 GPR119Q8TDV5 335 aa12.71□□□□□ -0.37
TRIM41-204ENST00000508930 ZNF700Q9H0M5 742 aa12.71□□□□□ -0.37
TRIM41-204ENST00000508930 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.71□□□□□ -0.37
TRIM41-204ENST00000508930 GFOD1Q9NXC2 390 aa12.71□□□□□ -0.37
TRIM41-204ENST00000508930 URGCP-MRPS24S4R325 110 aa12.71□□□□□ -0.37
TRIM41-204ENST00000508930 RTTNQ86VV8 2226 aa12.71□□□□□ -0.37
TRIM41-204ENST00000508930 A6NIZ1 184 aa12.71□□□□□ -0.37
TRIM41-204ENST00000508930 OR3A4PP47883 348 aa12.71□□□□□ -0.37
TRIM41-204ENST00000508930 FHITP49789 147 aa12.71□□□□□ -0.37
TRIM41-204ENST00000508930 POLR2HP52434 150 aaKnown RBP12.71□□□□□ -0.37
TRIM41-204ENST00000508930 RAP1BP61224 184 aa12.71□□□□□ -0.37
TRIM41-204ENST00000508930 SUPT4H1P63272 117 aaKnown RBP12.71□□□□□ -0.37
TRIM41-204ENST00000508930 HHEXQ03014 270 aa12.71□□□□□ -0.37
TRIM41-204ENST00000508930 FAM189A2Q15884 450 aa12.71□□□□□ -0.37
TRIM41-204ENST00000508930 ZNF383Q8NA42 475 aa12.71□□□□□ -0.37
TRIM41-204ENST00000508930 SEMA6DQ8NFY4 1073 aa12.71□□□□□ -0.37
TRIM41-204ENST00000508930 OR2AJ1Q8NGZ0 328 aa12.71□□□□□ -0.37
TRIM41-204ENST00000508930 PIGQQ9BRB3 760 aa12.71□□□□□ -0.37
TRIM41-204ENST00000508930 MED29Q9NX70 200 aa12.71□□□□□ -0.37
TRIM41-204ENST00000508930 GAR1Q9NY12 217 aaKnown RBP12.71□□□□□ -0.37
TRIM41-204ENST00000508930 FIGNL2A6NMB9 653 aa12.71□□□□□ -0.38
TRIM41-204ENST00000508930 B4DGG1 531 aa12.71□□□□□ -0.38
TRIM41-204ENST00000508930 TNFP01375 233 aa12.71□□□□□ -0.38
TRIM41-204ENST00000508930 SERPINA2P20848 420 aa12.71□□□□□ -0.38
TRIM41-204ENST00000508930 BLVRBP30043 206 aaPredicted RBP12.71□□□□□ -0.38
TRIM41-204ENST00000508930 SNCAP37840 140 aa12.71□□□□□ -0.38
TRIM41-204ENST00000508930 RGS19P49795 217 aa12.71□□□□□ -0.38
TRIM41-204ENST00000508930 COMMD1Q8N668 190 aa12.71□□□□□ -0.38
TRIM41-204ENST00000508930 SLC26A10Q8NG04 563 aa12.71□□□□□ -0.38
TRIM41-204ENST00000508930 TOMM40LQ969M1 308 aa12.71□□□□□ -0.38
TRIM41-204ENST00000508930 RTBDNQ9BSG5 229 aaPredicted RBP12.71□□□□□ -0.38
TRIM41-204ENST00000508930 C19orf12Q9NSK7 152 aa12.71□□□□□ -0.38
TRIM41-204ENST00000508930 XRCC2O43543 280 aa12.7□□□□□ -0.38
TRIM41-204ENST00000508930 TTRP02766 147 aa12.7□□□□□ -0.38
TRIM41-204ENST00000508930 VEGFBP49765 207 aa12.7□□□□□ -0.38
TRIM41-204ENST00000508930 RAB1AP62820 205 aa12.7□□□□□ -0.38
TRIM41-204ENST00000508930 FNDC7Q5VTL7 733 aa12.7□□□□□ -0.38
TRIM41-204ENST00000508930 NSUN5P2Q63ZY6 315 aa12.7□□□□□ -0.38
TRIM41-204ENST00000508930 HIST2H3AQ71DI3 136 aa12.7□□□□□ -0.38
TRIM41-204ENST00000508930 SLAMF9Q96A28 289 aa12.7□□□□□ -0.38
TRIM41-204ENST00000508930 INTS12Q96CB8 462 aaKnown RBP12.7□□□□□ -0.38
TRIM41-204ENST00000508930 TAAR9Q96RI9 348 aa12.7□□□□□ -0.38
TRIM41-204ENST00000508930 EMC6Q9BV81 110 aa12.7□□□□□ -0.38
TRIM41-204ENST00000508930 SLC35B3Q9H1N7 401 aa12.7□□□□□ -0.38
TRIM41-204ENST00000508930 OR10A2Q9H208 303 aa12.7□□□□□ -0.38
TRIM41-204ENST00000508930 TUBA4BQ9H853 241 aa12.7□□□□□ -0.38
TRIM41-204ENST00000508930 PLPP3O14495 311 aa12.7□□□□□ -0.38
TRIM41-204ENST00000508930 ZNF217O75362 1048 aa12.7□□□□□ -0.38
TRIM41-204ENST00000508930 PLAC9Q5JTB6 97 aa12.7□□□□□ -0.38
TRIM41-204ENST00000508930 TMEM268Q5VZI3 342 aa12.7□□□□□ -0.38
TRIM41-204ENST00000508930 SPRED2Q7Z698 418 aa12.7□□□□□ -0.38
TRIM41-204ENST00000508930 OR10D4PQ8NGN7 298 aa12.7□□□□□ -0.38
TRIM41-204ENST00000508930 BMFQ96LC9 184 aa12.7□□□□□ -0.38
TRIM41-204ENST00000508930 SLC46A1Q96NT5 459 aa12.7□□□□□ -0.38
TRIM41-204ENST00000508930 LINC01553A4QN01 128 aa12.7□□□□□ -0.38
TRIM41-204ENST00000508930 TMEM14DPA8MWL7 114 aa12.7□□□□□ -0.38
TRIM41-204ENST00000508930 CDC14BO60729 498 aa12.7□□□□□ -0.38
TRIM41-204ENST00000508930 DIRAS3O95661 229 aa12.7□□□□□ -0.38
TRIM41-204ENST00000508930 IGHV2-5P01817 119 aa12.7□□□□□ -0.38
TRIM41-204ENST00000508930 GAPDHP04406 335 aaKnown RBP12.7□□□□□ -0.38
TRIM41-204ENST00000508930 HNRNPA2B1P22626 353 aaKnown RBP12.7□□□□□ -0.38
TRIM41-204ENST00000508930 NTSR1P30989 418 aa12.7□□□□□ -0.38
TRIM41-204ENST00000508930 HSD17B7P56937 341 aa12.7□□□□□ -0.38
TRIM41-204ENST00000508930 HGFACQ04756 655 aa12.7□□□□□ -0.38
TRIM41-204ENST00000508930 ADAMTS18Q8TE60 1221 aa12.7□□□□□ -0.38
TRIM41-204ENST00000508930 JSRP1Q96MG2 331 aaPredicted RBP12.7□□□□□ -0.38
TRIM41-204ENST00000508930 RTN4RQ9BZR6 473 aa12.7□□□□□ -0.38
TRIM41-204ENST00000508930 PMS2P1A4D2B8 440 aa12.69□□□□□ -0.38
TRIM41-204ENST00000508930 GLI4P10075 376 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms