RNA–Protein interactions for RNA: ENST00000508902.5

CLDND1-220, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 916 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-220ENST00000508902 ANKRD30BLA7E2S9 258 aa15.2■□□□□ 0.02
CLDND1-220ENST00000508902 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP15.2■□□□□ 0.02
CLDND1-220ENST00000508902 SLC16A6O15403 523 aa15.2■□□□□ 0.02
CLDND1-220ENST00000508902 CLIC3O95833 236 aa15.2■□□□□ 0.02
CLDND1-220ENST00000508902 CST4P01036 141 aa15.2■□□□□ 0.02
CLDND1-220ENST00000508902 OR2T7P0C7T2 308 aa15.2■□□□□ 0.02
CLDND1-220ENST00000508902 CFL1P23528 166 aaKnown RBP15.2■□□□□ 0.02
CLDND1-220ENST00000508902 MDH2P40926 338 aaKnown RBP15.2■□□□□ 0.02
CLDND1-220ENST00000508902 MTNR1AP48039 350 aa15.2■□□□□ 0.02
CLDND1-220ENST00000508902 LCN2P80188 198 aa15.2■□□□□ 0.02
CLDND1-220ENST00000508902 ZNF154Q13106 437 aa15.2■□□□□ 0.02
CLDND1-220ENST00000508902 PRDX4Q13162 271 aa15.2■□□□□ 0.02
CLDND1-220ENST00000508902 TMED1Q13445 227 aa15.2■□□□□ 0.02
CLDND1-220ENST00000508902 CHRFAM7AQ494W8 412 aa15.2■□□□□ 0.02
CLDND1-220ENST00000508902 ZNF404Q494X3 552 aa15.2■□□□□ 0.02
CLDND1-220ENST00000508902 LIPNQ5VXI9 398 aa15.2■□□□□ 0.02
CLDND1-220ENST00000508902 GALNT4Q8N4A0 578 aa15.2■□□□□ 0.02
CLDND1-220ENST00000508902 PLPP7Q8NBV4 271 aa15.2■□□□□ 0.02
CLDND1-220ENST00000508902 OR2T27Q8NH04 317 aa15.2■□□□□ 0.02
CLDND1-220ENST00000508902 OR51F2Q8NH61 342 aa15.2■□□□□ 0.02
CLDND1-220ENST00000508902 RORBQ92753 470 aa15.2■□□□□ 0.02
CLDND1-220ENST00000508902 STMN2Q93045 179 aa15.2■□□□□ 0.02
CLDND1-220ENST00000508902 RAB39BQ96DA2 213 aa15.2■□□□□ 0.02
CLDND1-220ENST00000508902 LGALS12Q96DT0 336 aa15.2■□□□□ 0.02
CLDND1-220ENST00000508902 RNFT2Q96EX2 444 aa15.2■□□□□ 0.02
CLDND1-220ENST00000508902 FAM71F1Q96KD3 344 aaPredicted RBP15.2■□□□□ 0.02
CLDND1-220ENST00000508902 TMPRSS13Q9BYE2 586 aa15.2■□□□□ 0.02
CLDND1-220ENST00000508902 MMP26Q9NRE1 261 aa15.2■□□□□ 0.02
CLDND1-220ENST00000508902 ACOXLQ9NUZ1 547 aa15.2■□□□□ 0.02
CLDND1-220ENST00000508902 C1orf123Q9NWV4 160 aa15.2■□□□□ 0.02
CLDND1-220ENST00000508902 NKX1-2Q9UD57 310 aaPredicted RBP15.2■□□□□ 0.02
CLDND1-220ENST00000508902 CDC42EP3Q9UKI2 254 aa15.2■□□□□ 0.02
CLDND1-220ENST00000508902 ZNF850A8MQ14 1090 aa15.19■□□□□ 0.02
CLDND1-220ENST00000508902 TRAPPC2LH3BP13 241 aa15.19■□□□□ 0.02
CLDND1-220ENST00000508902 PHYHO14832 338 aa15.19■□□□□ 0.02
CLDND1-220ENST00000508902 TNFRSF13BO14836 293 aaPredicted RBP15.19■□□□□ 0.02
CLDND1-220ENST00000508902 WBP4O75554 376 aaKnown RBP15.19■□□□□ 0.02
CLDND1-220ENST00000508902 RPP14O95059 124 aaKnown RBP15.19■□□□□ 0.02
CLDND1-220ENST00000508902 LHBP01229 141 aa15.19■□□□□ 0.02
CLDND1-220ENST00000508902 GRPP07492 148 aa15.19■□□□□ 0.02
CLDND1-220ENST00000508902 WNT2P09544 360 aa15.19■□□□□ 0.02
CLDND1-220ENST00000508902 KIR3DL2P43630 455 aa15.19■□□□□ 0.02
CLDND1-220ENST00000508902 GABPB1Q06547 395 aaPredicted RBP15.19■□□□□ 0.02
CLDND1-220ENST00000508902 POU4F2Q12837 409 aa15.19■□□□□ 0.02
CLDND1-220ENST00000508902 SMN1Q16637 294 aaKnown RBP15.19■□□□□ 0.02
CLDND1-220ENST00000508902 ZNF829Q3KNS6 432 aaPredicted RBP15.19■□□□□ 0.02
CLDND1-220ENST00000508902 TP53I3Q53FA7 332 aa15.19■□□□□ 0.02
CLDND1-220ENST00000508902 Q6ZSR3 168 aa15.19■□□□□ 0.02
CLDND1-220ENST00000508902 GLCCI1Q86VQ1 547 aa15.19■□□□□ 0.02
CLDND1-220ENST00000508902 CATSPERDQ86XM0 798 aa15.19■□□□□ 0.02
CLDND1-220ENST00000508902 KLBQ86Z14 1044 aa15.19■□□□□ 0.02
CLDND1-220ENST00000508902 ELMOD2Q8IZ81 293 aa15.19■□□□□ 0.02
CLDND1-220ENST00000508902 PRSS35Q8N3Z0 413 aa15.19■□□□□ 0.02
CLDND1-220ENST00000508902 CSNK2A3Q8NEV1 391 aa15.19■□□□□ 0.02
CLDND1-220ENST00000508902 OR1M1Q8NGA1 313 aa15.19■□□□□ 0.02
CLDND1-220ENST00000508902 OR5P3Q8WZ94 311 aa15.19■□□□□ 0.02
CLDND1-220ENST00000508902 SEH1LQ96EE3 360 aa15.19■□□□□ 0.02
CLDND1-220ENST00000508902 TLNRD1Q9H1K6 362 aa15.19■□□□□ 0.02
CLDND1-220ENST00000508902 AMBNQ9NP70 447 aa15.19■□□□□ 0.02
CLDND1-220ENST00000508902 SMPD3Q9NY59 655 aaPredicted RBP15.19■□□□□ 0.02
CLDND1-220ENST00000508902 CTSZQ9UBR2 303 aa15.19■□□□□ 0.02
CLDND1-220ENST00000508902 OR52A1Q9UKL2 312 aa15.19■□□□□ 0.02
CLDND1-220ENST00000508902 EXOGQ9Y2C4 368 aaKnown RBP15.19■□□□□ 0.02
CLDND1-220ENST00000508902 METTL15A6NJ78 407 aa15.18■□□□□ 0.02
CLDND1-220ENST00000508902 A8MXK9 166 aa15.18■□□□□ 0.02
CLDND1-220ENST00000508902 LOC110117498-PIK3R3F6TDL0 507 aa15.18■□□□□ 0.02
CLDND1-220ENST00000508902 IFNL4K9M1U5 179 aa15.18■□□□□ 0.02
CLDND1-220ENST00000508902 P2RY10O00398 339 aa15.18■□□□□ 0.02
CLDND1-220ENST00000508902 PHF1O43189 567 aaPredicted RBP15.18■□□□□ 0.02
CLDND1-220ENST00000508902 FSTL3O95633 263 aa15.18■□□□□ 0.02
CLDND1-220ENST00000508902 FAM157CP0CG43 387 aa15.18■□□□□ 0.02
CLDND1-220ENST00000508902 DBTP11182 482 aaKnown RBP15.18■□□□□ 0.02
CLDND1-220ENST00000508902 FAHP16930 419 aa15.18■□□□□ 0.02
CLDND1-220ENST00000508902 PSMB10P40306 273 aa15.18■□□□□ 0.02
CLDND1-220ENST00000508902 PAX2Q02962 417 aa15.18■□□□□ 0.02
CLDND1-220ENST00000508902 WDR82Q6UXN9 313 aa15.18■□□□□ 0.02
CLDND1-220ENST00000508902 ZNF841Q6ZN19 808 aa15.18■□□□□ 0.02
CLDND1-220ENST00000508902 PEG10Q86TG7 708 aaKnown RBP15.18■□□□□ 0.02
CLDND1-220ENST00000508902 OR14K1Q8NGZ2 314 aa15.18■□□□□ 0.02
CLDND1-220ENST00000508902 RFKQ969G6 155 aa15.18■□□□□ 0.02
CLDND1-220ENST00000508902 ERGIC1Q969X5 290 aa15.18■□□□□ 0.02
CLDND1-220ENST00000508902 DACT3Q96B18 629 aaPredicted RBP15.18■□□□□ 0.02
CLDND1-220ENST00000508902 SHARPINQ9H0F6 387 aa15.18■□□□□ 0.02
CLDND1-220ENST00000508902 FN3KRPQ9HA64 309 aa15.18■□□□□ 0.02
CLDND1-220ENST00000508902 OPN4Q9UHM6 478 aa15.18■□□□□ 0.02
CLDND1-220ENST00000508902 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP15.18■□□□□ 0.02
CLDND1-220ENST00000508902 MYRFQ9Y2G1 1151 aa15.18■□□□□ 0.02
CLDND1-220ENST00000508902 PPIAL4EA0A075B759 164 aa15.17■□□□□ 0.02
CLDND1-220ENST00000508902 TRAV20A0A0B4J274 112 aa15.17■□□□□ 0.02
CLDND1-220ENST00000508902 PPIAL4DF5H284 164 aa15.17■□□□□ 0.02
CLDND1-220ENST00000508902 H3BSH0 61 aa15.17■□□□□ 0.02
CLDND1-220ENST00000508902 CASQ2O14958 399 aaPredicted RBP15.17■□□□□ 0.02
CLDND1-220ENST00000508902 PPIAL4FP0DN26 164 aa15.17■□□□□ 0.02
CLDND1-220ENST00000508902 CCL1P22362 96 aa15.17■□□□□ 0.02
CLDND1-220ENST00000508902 NANOS3P60323 173 aaKnown RBP15.17■□□□□ 0.02
CLDND1-220ENST00000508902 ADARB1P78563 741 aaKnown RBP15.17■□□□□ 0.02
CLDND1-220ENST00000508902 CDONQ4KMG0 1287 aa15.17■□□□□ 0.02
CLDND1-220ENST00000508902 WDR38Q5JTN6 314 aa15.17■□□□□ 0.02
CLDND1-220ENST00000508902 OGFRL1Q5TC84 451 aaPredicted RBP15.17■□□□□ 0.02
CLDND1-220ENST00000508902 SFRP4Q6FHJ7 346 aaPredicted RBP15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms