RNA–Protein interactions for RNA: ENST00000508597.1

HMGB1P44-201, Transcript of high mobility group box 1 pseudogene 44, humanhuman

BASIC

Gene HMGB1P44, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P44-201ENST00000508597 ZNF442Q9H7R0 627 aa4.72□□□□□ -1.65
HMGB1P44-201ENST00000508597 CDH20Q9HBT6 801 aa4.72□□□□□ -1.65
HMGB1P44-201ENST00000508597 FGF20Q9NP95 211 aaPredicted RBP4.72□□□□□ -1.65
HMGB1P44-201ENST00000508597 FAIMQ9NVQ4 179 aa4.72□□□□□ -1.65
HMGB1P44-201ENST00000508597 CHCHD3Q9NX63 227 aaKnown RBP4.72□□□□□ -1.65
HMGB1P44-201ENST00000508597 NPAP1Q9NZP6 1156 aa4.72□□□□□ -1.65
HMGB1P44-201ENST00000508597 DNAJC27Q9NZQ0 273 aa4.72□□□□□ -1.65
HMGB1P44-201ENST00000508597 LPAR3Q9UBY5 353 aa4.72□□□□□ -1.65
HMGB1P44-201ENST00000508597 STEAP1Q9UHE8 339 aa4.72□□□□□ -1.65
HMGB1P44-201ENST00000508597 ZNF391Q9UJN7 358 aa4.72□□□□□ -1.65
HMGB1P44-201ENST00000508597 TPRKBQ9Y3C4 175 aa4.72□□□□□ -1.65
HMGB1P44-201ENST00000508597 RNF115Q9Y4L5 304 aa4.72□□□□□ -1.65
HMGB1P44-201ENST00000508597 LRRC42Q9Y546 428 aa4.72□□□□□ -1.65
HMGB1P44-201ENST00000508597 ARID1AO14497 2285 aa4.72□□□□□ -1.65
HMGB1P44-201ENST00000508597 ABCA12Q86UK0 2595 aa4.72□□□□□ -1.65
HMGB1P44-201ENST00000508597 CRYBG3Q68DQ2 2970 aa4.71□□□□□ -1.65
HMGB1P44-201ENST00000508597 UTP20O75691 2785 aaKnown RBP4.71□□□□□ -1.65
HMGB1P44-201ENST00000508597 LOC100509620A0A075B734 347 aa4.71□□□□□ -1.66
HMGB1P44-201ENST00000508597 IGHV2OR16-5A0A0B4J2B6 119 aa4.71□□□□□ -1.66
HMGB1P44-201ENST00000508597 A0A1W2PR80 420 aa4.71□□□□□ -1.66
HMGB1P44-201ENST00000508597 C5orf49A4QMS7 147 aa4.71□□□□□ -1.66
HMGB1P44-201ENST00000508597 M0R129 80 aa4.71□□□□□ -1.66
HMGB1P44-201ENST00000508597 ABCD4O14678 606 aa4.71□□□□□ -1.66
HMGB1P44-201ENST00000508597 SELENOFO60613 162 aa4.71□□□□□ -1.66
HMGB1P44-201ENST00000508597 CTAG2O75638 210 aa4.71□□□□□ -1.66
HMGB1P44-201ENST00000508597 ACTL6BO94805 426 aa4.71□□□□□ -1.66
HMGB1P44-201ENST00000508597 CLIC3O95833 236 aa4.71□□□□□ -1.66
HMGB1P44-201ENST00000508597 KRT8P05787 483 aa4.71□□□□□ -1.66
HMGB1P44-201ENST00000508597 GNAO1P09471 354 aa4.71□□□□□ -1.66
HMGB1P44-201ENST00000508597 H2BFMP0C1H6 154 aa4.71□□□□□ -1.66
HMGB1P44-201ENST00000508597 MYL12AP19105 171 aa4.71□□□□□ -1.66
HMGB1P44-201ENST00000508597 CFL1P23528 166 aaKnown RBP4.71□□□□□ -1.66
HMGB1P44-201ENST00000508597 LOXP28300 417 aaPredicted RBP4.71□□□□□ -1.66
HMGB1P44-201ENST00000508597 HSD11B1P28845 292 aa4.71□□□□□ -1.66
HMGB1P44-201ENST00000508597 OPRL1P41146 370 aa4.71□□□□□ -1.66
HMGB1P44-201ENST00000508597 NAA10P41227 235 aaPredicted RBP4.71□□□□□ -1.66
HMGB1P44-201ENST00000508597 EVX1P49640 407 aa4.71□□□□□ -1.66
HMGB1P44-201ENST00000508597 RIDAP52758 137 aaKnown RBP4.71□□□□□ -1.66
HMGB1P44-201ENST00000508597 UCP2P55851 309 aa4.71□□□□□ -1.66
HMGB1P44-201ENST00000508597 SELENOVP59797 346 aa4.71□□□□□ -1.66
HMGB1P44-201ENST00000508597 TUBA1BP68363 451 aa4.71□□□□□ -1.66
HMGB1P44-201ENST00000508597 TUBA4AP68366 448 aa4.71□□□□□ -1.66
HMGB1P44-201ENST00000508597 BSPH1Q075Z2 132 aa4.71□□□□□ -1.66
HMGB1P44-201ENST00000508597 ZNF829Q3KNS6 432 aaPredicted RBP4.71□□□□□ -1.66
HMGB1P44-201ENST00000508597 CDONQ4KMG0 1287 aa4.71□□□□□ -1.66
HMGB1P44-201ENST00000508597 SLC22A25Q6T423 547 aa4.71□□□□□ -1.66
HMGB1P44-201ENST00000508597 ZNF322Q6U7Q0 402 aaPredicted RBP4.71□□□□□ -1.66
HMGB1P44-201ENST00000508597 TMPRSS11AQ6ZMR5 421 aa4.71□□□□□ -1.66
HMGB1P44-201ENST00000508597 ZNF704Q6ZNC4 412 aaPredicted RBP4.71□□□□□ -1.66
HMGB1P44-201ENST00000508597 CFAP77Q6ZQR2 320 aa4.71□□□□□ -1.66
HMGB1P44-201ENST00000508597 COLCA1Q6ZS62 124 aa4.71□□□□□ -1.66
HMGB1P44-201ENST00000508597 TUBA1AQ71U36 451 aa4.71□□□□□ -1.66
HMGB1P44-201ENST00000508597 FAM220AQ7Z4H9 259 aa4.71□□□□□ -1.66
HMGB1P44-201ENST00000508597 BCDIN3DQ7Z5W3 292 aaKnown RBP4.71□□□□□ -1.66
HMGB1P44-201ENST00000508597 KRT77Q7Z794 578 aa4.71□□□□□ -1.66
HMGB1P44-201ENST00000508597 ZNF584Q8IVC4 421 aa4.71□□□□□ -1.66
HMGB1P44-201ENST00000508597 LINC00346Q8IVM7 164 aa4.71□□□□□ -1.66
HMGB1P44-201ENST00000508597 SYS1Q8N2H4 156 aa4.71□□□□□ -1.66
HMGB1P44-201ENST00000508597 ZNF540Q8NDQ6 660 aa4.71□□□□□ -1.66
HMGB1P44-201ENST00000508597 OR10H4Q8NGA5 316 aa4.71□□□□□ -1.66
HMGB1P44-201ENST00000508597 OR52H1Q8NGJ2 320 aa4.71□□□□□ -1.66
HMGB1P44-201ENST00000508597 AKR7LQ8NHP1 331 aa4.71□□□□□ -1.66
HMGB1P44-201ENST00000508597 CNIH3Q8TBE1 160 aa4.71□□□□□ -1.66
HMGB1P44-201ENST00000508597 THEM6Q8WUY1 208 aa4.71□□□□□ -1.66
HMGB1P44-201ENST00000508597 MYDGFQ969H8 173 aa4.71□□□□□ -1.66
HMGB1P44-201ENST00000508597 R3HDM4Q96D70 268 aa4.71□□□□□ -1.66
HMGB1P44-201ENST00000508597 LGALS12Q96DT0 336 aa4.71□□□□□ -1.66
HMGB1P44-201ENST00000508597 PIK3IP1Q96FE7 263 aa4.71□□□□□ -1.66
HMGB1P44-201ENST00000508597 TMEM80Q96HE8 168 aa4.71□□□□□ -1.66
HMGB1P44-201ENST00000508597 C4orf45Q96LM5 186 aa4.71□□□□□ -1.66
HMGB1P44-201ENST00000508597 FOXN4Q96NZ1 517 aa4.71□□□□□ -1.66
HMGB1P44-201ENST00000508597 OR8B4Q96RC9 309 aa4.71□□□□□ -1.66
HMGB1P44-201ENST00000508597 COPS4Q9BT78 406 aa4.71□□□□□ -1.66
HMGB1P44-201ENST00000508597 C1QTNF6Q9BXI9 259 aa4.71□□□□□ -1.66
HMGB1P44-201ENST00000508597 C1QTNF5Q9BXJ0 243 aa4.71□□□□□ -1.66
HMGB1P44-201ENST00000508597 RGCCQ9H4X1 137 aa4.71□□□□□ -1.66
HMGB1P44-201ENST00000508597 OPA3Q9H6K4 179 aa4.71□□□□□ -1.66
HMGB1P44-201ENST00000508597 MOB1AQ9H8S9 216 aa4.71□□□□□ -1.66
HMGB1P44-201ENST00000508597 NOX3Q9HBY0 568 aa4.71□□□□□ -1.66
HMGB1P44-201ENST00000508597 PNRC2Q9NPJ4 139 aaKnown RBP4.71□□□□□ -1.66
HMGB1P44-201ENST00000508597 FKBP14Q9NWM8 211 aa4.71□□□□□ -1.66
HMGB1P44-201ENST00000508597 PSORS1C1Q9UIG5 152 aa4.71□□□□□ -1.66
HMGB1P44-201ENST00000508597 DIMT1Q9UNQ2 313 aaKnown RBP4.71□□□□□ -1.66
HMGB1P44-201ENST00000508597 EXOSC1Q9Y3B2 195 aaKnown RBP4.71□□□□□ -1.66
HMGB1P44-201ENST00000508597 PCDHGB5Q9Y5G0 923 aa4.71□□□□□ -1.66
HMGB1P44-201ENST00000508597 NOTCH2Q04721 2471 aa4.71□□□□□ -1.66
HMGB1P44-201ENST00000508597 ARFGEF3Q5TH69 2177 aa4.71□□□□□ -1.66
HMGB1P44-201ENST00000508597 NAV2Q8IVL1 2488 aa4.7□□□□□ -1.66
HMGB1P44-201ENST00000508597 ANKRD17O75179 2603 aaKnown RBP4.7□□□□□ -1.66
HMGB1P44-201ENST00000508597 ASH1LQ9NR48 2969 aaKnown RBP4.7□□□□□ -1.66
HMGB1P44-201ENST00000508597 A0A1W2PQL4 384 aaPredicted RBP4.7□□□□□ -1.66
HMGB1P44-201ENST00000508597 DAPL1A0PJW8 107 aa4.7□□□□□ -1.66
HMGB1P44-201ENST00000508597 METTL15A6NJ78 407 aa4.7□□□□□ -1.66
HMGB1P44-201ENST00000508597 SHISA9B4DS77 424 aa4.7□□□□□ -1.66
HMGB1P44-201ENST00000508597 F5H5K5 113 aa4.7□□□□□ -1.66
HMGB1P44-201ENST00000508597 M0R135 149 aa4.7□□□□□ -1.66
HMGB1P44-201ENST00000508597 SLC1A7O00341 560 aa4.7□□□□□ -1.66
HMGB1P44-201ENST00000508597 HS3ST1O14792 307 aa4.7□□□□□ -1.66
HMGB1P44-201ENST00000508597 XRCC2O43543 280 aa4.7□□□□□ -1.66
HMGB1P44-201ENST00000508597 SMPD2O60906 423 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms