RNA–Protein interactions for RNA: ENST00000508524.1

TOPBP1-206, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-206ENST00000508524 CXorf40BQ96DE9 158 aa2.55□□□□□ -2
TOPBP1-206ENST00000508524 CMTM7Q96FZ5 175 aa2.55□□□□□ -2
TOPBP1-206ENST00000508524 ITCHQ96J02 903 aa2.55□□□□□ -2
TOPBP1-206ENST00000508524 SECISBP2Q96T21 854 aaKnown RBP2.55□□□□□ -2
TOPBP1-206ENST00000508524 CCL19Q99731 98 aa2.55□□□□□ -2
TOPBP1-206ENST00000508524 RNF167Q9H6Y7 350 aa2.55□□□□□ -2
TOPBP1-206ENST00000508524 COQ4Q9Y3A0 265 aa2.55□□□□□ -2
TOPBP1-206ENST00000508524 HEATR5AQ86XA9 2040 aa2.54□□□□□ -2
TOPBP1-206ENST00000508524 YLPM1P49750 1951 aaKnown RBP2.54□□□□□ -2
TOPBP1-206ENST00000508524 CSMD3Q7Z407 3707 aa2.54□□□□□ -2
TOPBP1-206ENST00000508524 NSG1A0A0A6YYJ2 146 aa2.54□□□□□ -2
TOPBP1-206ENST00000508524 A0A0G2JMM0 328 aa2.54□□□□□ -2
TOPBP1-206ENST00000508524 A0A1W2PPB8 328 aa2.54□□□□□ -2
TOPBP1-206ENST00000508524 A0A1W2PRS3 328 aa2.54□□□□□ -2
TOPBP1-206ENST00000508524 PLAC8L1A1L4L8 177 aa2.54□□□□□ -2
TOPBP1-206ENST00000508524 KIR3DP1A8MWS1 328 aa2.54□□□□□ -2
TOPBP1-206ENST00000508524 GOLGA8SH3BPF8 625 aa2.54□□□□□ -2
TOPBP1-206ENST00000508524 PEX7O00628 323 aa2.54□□□□□ -2
TOPBP1-206ENST00000508524 TAPBPO15533 448 aa2.54□□□□□ -2
TOPBP1-206ENST00000508524 OR1F1O43749 312 aa2.54□□□□□ -2
TOPBP1-206ENST00000508524 CDC40O60508 579 aaKnown RBP eCLIP2.54□□□□□ -2
TOPBP1-206ENST00000508524 ENTPD5O75356 428 aa2.54□□□□□ -2
TOPBP1-206ENST00000508524 TLX1NBP0CAT3 122 aa2.54□□□□□ -2
TOPBP1-206ENST00000508524 UBE2AP49459 152 aa2.54□□□□□ -2
TOPBP1-206ENST00000508524 SLC25A35Q3KQZ1 300 aa2.54□□□□□ -2
TOPBP1-206ENST00000508524 FBXL19-AS1Q494R0 122 aa2.54□□□□□ -2
TOPBP1-206ENST00000508524 GGTA1PQ4G0N0 100 aa2.54□□□□□ -2
TOPBP1-206ENST00000508524 ZCWPW2Q504Y3 356 aa2.54□□□□□ -2
TOPBP1-206ENST00000508524 NANOGP8Q6NSW7 305 aa2.54□□□□□ -2
TOPBP1-206ENST00000508524 Q6ZN92 141 aa2.54□□□□□ -2
TOPBP1-206ENST00000508524 CRLF3Q8IUI8 442 aa2.54□□□□□ -2
TOPBP1-206ENST00000508524 NPWQ8N729 165 aa2.54□□□□□ -2
TOPBP1-206ENST00000508524 CCDC54Q8NEL0 328 aa2.54□□□□□ -2
TOPBP1-206ENST00000508524 OR4E2Q8NGC2 313 aa2.54□□□□□ -2
TOPBP1-206ENST00000508524 CCDC110Q8TBZ0 833 aa2.54□□□□□ -2
TOPBP1-206ENST00000508524 RNASE6Q93091 150 aaKnown RBP2.54□□□□□ -2
TOPBP1-206ENST00000508524 TM4SF19Q96DZ7 209 aa2.54□□□□□ -2
TOPBP1-206ENST00000508524 LYSTQ99698 3801 aa2.54□□□□□ -2
TOPBP1-206ENST00000508524 BEX2Q9BXY8 128 aa2.54□□□□□ -2
TOPBP1-206ENST00000508524 DPH5Q9H2P9 285 aa2.54□□□□□ -2
TOPBP1-206ENST00000508524 XKR8Q9H6D3 395 aa2.54□□□□□ -2
TOPBP1-206ENST00000508524 LRRC19Q9H756 370 aa2.54□□□□□ -2
TOPBP1-206ENST00000508524 WDR54Q9H977 334 aa2.54□□□□□ -2
TOPBP1-206ENST00000508524 SLC17A5Q9NRA2 495 aa2.54□□□□□ -2
TOPBP1-206ENST00000508524 IMP3Q9NV31 184 aaKnown RBP2.54□□□□□ -2
TOPBP1-206ENST00000508524 CGNQ9P2M7 1197 aaKnown RBP2.54□□□□□ -2
TOPBP1-206ENST00000508524 ZNF629Q9UEG4 869 aaPredicted RBP2.54□□□□□ -2
TOPBP1-206ENST00000508524 OR12D3Q9UGF7 316 aa2.54□□□□□ -2
TOPBP1-206ENST00000508524 PCYOX1Q9UHG3 505 aa2.54□□□□□ -2
TOPBP1-206ENST00000508524 C3orf18Q9UK00 162 aa2.54□□□□□ -2
TOPBP1-206ENST00000508524 KIAA1257Q9ULG3 409 aa2.54□□□□□ -2
TOPBP1-206ENST00000508524 HPCAL4Q9UM19 191 aa2.54□□□□□ -2
TOPBP1-206ENST00000508524 UBR4Q5T4S7 5183 aa2.54□□□□□ -2
TOPBP1-206ENST00000508524 HERC1Q15751 4861 aa2.53□□□□□ -2
TOPBP1-206ENST00000508524 KIAA1109Q2LD37 5005 aa2.53□□□□□ -2
TOPBP1-206ENST00000508524 A0A1B0GX78 115 aa2.53□□□□□ -2
TOPBP1-206ENST00000508524 RBMY1BA6NDE4 496 aaKnown RBP2.53□□□□□ -2
TOPBP1-206ENST00000508524 RBMY1EA6NEQ0 496 aaKnown RBP2.53□□□□□ -2
TOPBP1-206ENST00000508524 A8MUI8 341 aa2.53□□□□□ -2
TOPBP1-206ENST00000508524 PSMD11O00231 422 aa2.53□□□□□ -2
TOPBP1-206ENST00000508524 SLC31A2O15432 143 aa2.53□□□□□ -2
TOPBP1-206ENST00000508524 LRATO95237 230 aa2.53□□□□□ -2
TOPBP1-206ENST00000508524 RBMY1DP0C7P1 496 aaKnown RBP2.53□□□□□ -2
TOPBP1-206ENST00000508524 RBMY1A1P0DJD3 496 aaKnown RBP2.53□□□□□ -2
TOPBP1-206ENST00000508524 HTR2AP28223 471 aa2.53□□□□□ -2
TOPBP1-206ENST00000508524 PEBP1P30086 187 aaKnown RBP2.53□□□□□ -2
TOPBP1-206ENST00000508524 NSG1P42857 185 aa2.53□□□□□ -2
TOPBP1-206ENST00000508524 ATP5J2P56134 94 aa2.53□□□□□ -2
TOPBP1-206ENST00000508524 GMFBP60983 142 aa2.53□□□□□ -2
TOPBP1-206ENST00000508524 MAXP61244 160 aa2.53□□□□□ -2
TOPBP1-206ENST00000508524 SPIBQ01892 262 aa2.53□□□□□ -2
TOPBP1-206ENST00000508524 CLEC12BQ2HXU8 276 aa2.53□□□□□ -2
TOPBP1-206ENST00000508524 TMEM249Q2WGJ8 235 aa2.53□□□□□ -2
TOPBP1-206ENST00000508524 SAMD4BQ5PRF9 694 aaKnown RBP2.53□□□□□ -2
TOPBP1-206ENST00000508524 H3F3CQ6NXT2 135 aa2.53□□□□□ -2
TOPBP1-206ENST00000508524 CNSTQ6PJW8 725 aa2.53□□□□□ -2
TOPBP1-206ENST00000508524 CCDC73Q6ZRK6 1079 aa2.53□□□□□ -2
TOPBP1-206ENST00000508524 C19orf35Q6ZS72 473 aa2.53□□□□□ -2
TOPBP1-206ENST00000508524 NDUFAF7Q7L592 441 aa2.53□□□□□ -2
TOPBP1-206ENST00000508524 MOB3BQ86TA1 216 aa2.53□□□□□ -2
TOPBP1-206ENST00000508524 OOSP2Q86WS3 158 aa2.53□□□□□ -2
TOPBP1-206ENST00000508524 UMODL1-AS1Q8N2C9 162 aa2.53□□□□□ -2
TOPBP1-206ENST00000508524 C3orf56Q8N813 242 aa2.53□□□□□ -2
TOPBP1-206ENST00000508524 FAM184AQ8NB25 1140 aa2.53□□□□□ -2
TOPBP1-206ENST00000508524 GPR26Q8NDV2 337 aa2.53□□□□□ -2
TOPBP1-206ENST00000508524 STXBP6Q8NFX7 210 aa2.53□□□□□ -2
TOPBP1-206ENST00000508524 ZNF606Q8WXB4 792 aa2.53□□□□□ -2
TOPBP1-206ENST00000508524 LRRC58Q96CX6 371 aa2.53□□□□□ -2
TOPBP1-206ENST00000508524 TBC1D31Q96DN5 1066 aa2.53□□□□□ -2
TOPBP1-206ENST00000508524 ZMYND19Q96E35 227 aaPredicted RBP2.53□□□□□ -2
TOPBP1-206ENST00000508524 LLPHQ9BRT6 129 aaKnown RBP2.53□□□□□ -2
TOPBP1-206ENST00000508524 TIMM29Q9BSF4 260 aa2.53□□□□□ -2
TOPBP1-206ENST00000508524 NDFIP1Q9BT67 221 aa2.53□□□□□ -2
TOPBP1-206ENST00000508524 TRIM62Q9BVG3 475 aa2.53□□□□□ -2
TOPBP1-206ENST00000508524 SLC7A5P2Q9GIP4 190 aa2.53□□□□□ -2
TOPBP1-206ENST00000508524 KIR3DX1Q9H7L2 352 aa2.53□□□□□ -2
TOPBP1-206ENST00000508524 FANCEQ9HB96 536 aa2.53□□□□□ -2
TOPBP1-206ENST00000508524 MRM3Q9HC36 420 aaKnown RBP2.53□□□□□ -2
TOPBP1-206ENST00000508524 PPIL1Q9Y3C6 166 aa2.53□□□□□ -2
TOPBP1-206ENST00000508524 ABCA13Q86UQ4 5058 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms