RNA–Protein interactions for RNA: ENST00000508474.5

UBE2D3-224, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 4,819 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-224ENST00000508474 OR5AU1Q8NGC0 362 aa6.6□□□□□ -1.35
UBE2D3-224ENST00000508474 OR52N4Q8NGI2 321 aa6.6□□□□□ -1.35
UBE2D3-224ENST00000508474 ABHD5Q8WTS1 349 aa6.6□□□□□ -1.35
UBE2D3-224ENST00000508474 SLC25A43Q8WUT9 341 aaPredicted RBP6.6□□□□□ -1.35
UBE2D3-224ENST00000508474 KIR3DX1Q9H7L2 352 aa6.6□□□□□ -1.35
UBE2D3-224ENST00000508474 MANBALQ9NQG1 85 aa6.6□□□□□ -1.35
UBE2D3-224ENST00000508474 STARD5Q9NSY2 213 aa6.6□□□□□ -1.35
UBE2D3-224ENST00000508474 RPH3ALQ9UNE2 315 aa6.6□□□□□ -1.35
UBE2D3-224ENST00000508474 PLSCR5A0PG75 271 aa6.6□□□□□ -1.35
UBE2D3-224ENST00000508474 ST8SIA5O15466 376 aa6.6□□□□□ -1.35
UBE2D3-224ENST00000508474 ZNF737O75373 536 aa6.6□□□□□ -1.35
UBE2D3-224ENST00000508474 YIF1AO95070 293 aa6.6□□□□□ -1.35
UBE2D3-224ENST00000508474 CD99P14209 185 aa6.6□□□□□ -1.35
UBE2D3-224ENST00000508474 HIST1H1DP16402 221 aaKnown RBP6.6□□□□□ -1.35
UBE2D3-224ENST00000508474 CRISP2P16562 243 aa6.6□□□□□ -1.35
UBE2D3-224ENST00000508474 FAM3BP58499 235 aaPredicted RBP6.6□□□□□ -1.35
UBE2D3-224ENST00000508474 ERVFC1-1P60608 527 aa6.6□□□□□ -1.35
UBE2D3-224ENST00000508474 C1orf61Q13536 156 aa6.6□□□□□ -1.35
UBE2D3-224ENST00000508474 RUNX3Q13761 415 aa6.6□□□□□ -1.35
UBE2D3-224ENST00000508474 TRMT12Q53H54 448 aaKnown RBP6.6□□□□□ -1.35
UBE2D3-224ENST00000508474 LYRM7Q5U5X0 104 aa6.6□□□□□ -1.35
UBE2D3-224ENST00000508474 ZNF385CQ66K41 422 aaPredicted RBP6.6□□□□□ -1.35
UBE2D3-224ENST00000508474 DGAT2L6Q6ZPD8 337 aa6.6□□□□□ -1.35
UBE2D3-224ENST00000508474 KLHDC9Q8NEP7 349 aa6.6□□□□□ -1.35
UBE2D3-224ENST00000508474 CHST11Q9NPF2 352 aa6.6□□□□□ -1.35
UBE2D3-224ENST00000508474 NAT8BQ9UHF3 227 aa6.6□□□□□ -1.35
UBE2D3-224ENST00000508474 ACAD8Q9UKU7 415 aa6.6□□□□□ -1.35
UBE2D3-224ENST00000508474 NUP98P52948 1817 aa6.6□□□□□ -1.35
UBE2D3-224ENST00000508474 C4orf47A7E2U8 309 aa6.6□□□□□ -1.35
UBE2D3-224ENST00000508474 NPIPB9F8W1W9 429 aa6.6□□□□□ -1.35
UBE2D3-224ENST00000508474 FCN1O00602 326 aa6.6□□□□□ -1.35
UBE2D3-224ENST00000508474 SIAH2O43255 324 aa6.6□□□□□ -1.35
UBE2D3-224ENST00000508474 SLC25A6P12236 298 aa6.6□□□□□ -1.35
UBE2D3-224ENST00000508474 DAOP14920 347 aa6.6□□□□□ -1.35
UBE2D3-224ENST00000508474 ZNF17P17021 662 aa6.6□□□□□ -1.35
UBE2D3-224ENST00000508474 TCN2P20062 427 aa6.6□□□□□ -1.35
UBE2D3-224ENST00000508474 ELOBQ15370 118 aa6.6□□□□□ -1.35
UBE2D3-224ENST00000508474 PHOSPHO2Q8TCD6 241 aa6.6□□□□□ -1.35
UBE2D3-224ENST00000508474 C4orf45Q96LM5 186 aa6.6□□□□□ -1.35
UBE2D3-224ENST00000508474 LRRC3BQ96PB8 259 aa6.6□□□□□ -1.35
UBE2D3-224ENST00000508474 ZFP64Q9NPA5 681 aa6.6□□□□□ -1.35
UBE2D3-224ENST00000508474 PRDM7Q9NQW5 492 aa6.6□□□□□ -1.35
UBE2D3-224ENST00000508474 B3GAT1Q9P2W7 334 aa6.6□□□□□ -1.35
UBE2D3-224ENST00000508474 MCTS1Q9ULC4 181 aaKnown RBP6.6□□□□□ -1.35
UBE2D3-224ENST00000508474 B9D1Q9UPM9 204 aa6.6□□□□□ -1.35
UBE2D3-224ENST00000508474 LSM2Q9Y333 95 aaKnown RBP6.6□□□□□ -1.35
UBE2D3-224ENST00000508474 SPINT2O43291 252 aa6.59□□□□□ -1.35
UBE2D3-224ENST00000508474 SOX15O60248 233 aa6.59□□□□□ -1.35
UBE2D3-224ENST00000508474 CD1AP06126 327 aa6.59□□□□□ -1.35
UBE2D3-224ENST00000508474 THBS4P35443 961 aa6.59□□□□□ -1.35
UBE2D3-224ENST00000508474 CASP6P55212 293 aa6.59□□□□□ -1.35
UBE2D3-224ENST00000508474 MLF1P58340 268 aa6.59□□□□□ -1.35
UBE2D3-224ENST00000508474 RPEL1Q2QD12 228 aa6.59□□□□□ -1.35
UBE2D3-224ENST00000508474 METRNLQ641Q3 311 aa6.59□□□□□ -1.35
UBE2D3-224ENST00000508474 MARCH3Q86UD3 253 aa6.59□□□□□ -1.35
UBE2D3-224ENST00000508474 C17orf47Q8NEP4 570 aa6.59□□□□□ -1.35
UBE2D3-224ENST00000508474 NEIL1Q96FI4 390 aaPredicted RBP6.59□□□□□ -1.35
UBE2D3-224ENST00000508474 MAGT1Q9H0U3 335 aa6.59□□□□□ -1.35
UBE2D3-224ENST00000508474 NAA60Q9H7X0 242 aa6.59□□□□□ -1.35
UBE2D3-224ENST00000508474 GPR84Q9NQS5 396 aa6.59□□□□□ -1.35
UBE2D3-224ENST00000508474 GSN-AS1Q9NRJ2 163 aa6.59□□□□□ -1.35
UBE2D3-224ENST00000508474 CA10Q9NS85 328 aa6.59□□□□□ -1.35
UBE2D3-224ENST00000508474 PRSS50Q9UI38 385 aa6.59□□□□□ -1.35
UBE2D3-224ENST00000508474 NEU3Q9UQ49 428 aa6.59□□□□□ -1.35
UBE2D3-224ENST00000508474 GOLGA4Q13439 2230 aaKnown RBP6.59□□□□□ -1.35
UBE2D3-224ENST00000508474 CXorf65A6NEN9 183 aa6.59□□□□□ -1.35
UBE2D3-224ENST00000508474 ZNF729A6NN14 1252 aaPredicted RBP6.59□□□□□ -1.35
UBE2D3-224ENST00000508474 IGLV3-27P01718 113 aa6.59□□□□□ -1.35
UBE2D3-224ENST00000508474 TTRP02766 147 aa6.59□□□□□ -1.35
UBE2D3-224ENST00000508474 STAG3L2P0CL84 134 aa6.59□□□□□ -1.35
UBE2D3-224ENST00000508474 SLC2A1P11166 492 aa6.59□□□□□ -1.35
UBE2D3-224ENST00000508474 PRF1P14222 555 aa6.59□□□□□ -1.35
UBE2D3-224ENST00000508474 IRS1P35568 1242 aa6.59□□□□□ -1.35
UBE2D3-224ENST00000508474 HSD17B7P56937 341 aa6.59□□□□□ -1.35
UBE2D3-224ENST00000508474 RAE1P78406 368 aaKnown RBP6.59□□□□□ -1.35
UBE2D3-224ENST00000508474 DEFB115Q30KQ5 88 aa6.59□□□□□ -1.35
UBE2D3-224ENST00000508474 TMEM176BQ3YBM2 270 aaPredicted RBP6.59□□□□□ -1.35
UBE2D3-224ENST00000508474 LRP11Q86VZ4 500 aa6.59□□□□□ -1.35
UBE2D3-224ENST00000508474 OR5C1Q8NGR4 320 aa6.59□□□□□ -1.35
UBE2D3-224ENST00000508474 RPS4Y2Q8TD47 263 aa6.59□□□□□ -1.35
UBE2D3-224ENST00000508474 HHIPQ96QV1 700 aa6.59□□□□□ -1.35
UBE2D3-224ENST00000508474 ELOVL1Q9BW60 279 aa6.59□□□□□ -1.35
UBE2D3-224ENST00000508474 GNG12Q9UBI6 72 aa6.59□□□□□ -1.35
UBE2D3-224ENST00000508474 RGPD2P0DJD1 1756 aa6.59□□□□□ -1.35
UBE2D3-224ENST00000508474 LTBP3Q9NS15 1303 aa6.59□□□□□ -1.35
UBE2D3-224ENST00000508474 A0A1B0GV90 55 aa6.59□□□□□ -1.35
UBE2D3-224ENST00000508474 CLEC18AA5D8T8 446 aa6.59□□□□□ -1.35
UBE2D3-224ENST00000508474 NPIPB8E9PQR5 432 aa6.59□□□□□ -1.35
UBE2D3-224ENST00000508474 CTSDP07339 412 aaPredicted RBP6.59□□□□□ -1.35
UBE2D3-224ENST00000508474 TGFBR3Q03167 851 aa6.59□□□□□ -1.35
UBE2D3-224ENST00000508474 ATP6V1FQ16864 119 aa6.59□□□□□ -1.35
UBE2D3-224ENST00000508474 TAS1R1Q7RTX1 841 aa6.59□□□□□ -1.35
UBE2D3-224ENST00000508474 LINC01465Q8N7H1 131 aa6.59□□□□□ -1.35
UBE2D3-224ENST00000508474 CLEC18CQ8NCF0 446 aa6.59□□□□□ -1.35
UBE2D3-224ENST00000508474 DTD1Q8TEA8 209 aa6.59□□□□□ -1.35
UBE2D3-224ENST00000508474 PP6455Q8WZ26 134 aa6.59□□□□□ -1.35
UBE2D3-224ENST00000508474 TRMT61AQ96FX7 289 aaKnown RBP6.59□□□□□ -1.35
UBE2D3-224ENST00000508474 TMEM191AQ9H0A3 160 aa6.59□□□□□ -1.35
UBE2D3-224ENST00000508474 DCAF16Q9NXF7 216 aa6.59□□□□□ -1.35
UBE2D3-224ENST00000508474 SSUH2Q9Y2M2 353 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms