RNA–Protein interactions for RNA: ENST00000508216.5

PDLIM5-210, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-210ENST00000508216 HS3ST3A1Q9Y663 406 aa9.63□□□□□ -0.87
PDLIM5-210ENST00000508216 SHROOM3Q8TF72 1996 aa9.63□□□□□ -0.87
PDLIM5-210ENST00000508216 ZNF106Q9H2Y7 1883 aaKnown RBP9.63□□□□□ -0.87
PDLIM5-210ENST00000508216 C1QTNF9BB2RNN3 333 aa9.63□□□□□ -0.87
PDLIM5-210ENST00000508216 GNG7O60262 68 aa9.63□□□□□ -0.87
PDLIM5-210ENST00000508216 TBX19O60806 448 aa9.63□□□□□ -0.87
PDLIM5-210ENST00000508216 NME6O75414 186 aaPredicted RBP9.63□□□□□ -0.87
PDLIM5-210ENST00000508216 JTBO76095 146 aa9.63□□□□□ -0.87
PDLIM5-210ENST00000508216 CD1AP06126 327 aa9.63□□□□□ -0.87
PDLIM5-210ENST00000508216 OR4Q2P0C623 313 aa9.63□□□□□ -0.87
PDLIM5-210ENST00000508216 AKAIN1P0CW23 69 aa9.63□□□□□ -0.87
PDLIM5-210ENST00000508216 SMIM10L1P0DMW3 83 aa9.63□□□□□ -0.87
PDLIM5-210ENST00000508216 GNB3P16520 340 aa9.63□□□□□ -0.87
PDLIM5-210ENST00000508216 GABRA2P47869 451 aa9.63□□□□□ -0.87
PDLIM5-210ENST00000508216 FAM3BP58499 235 aaPredicted RBP9.63□□□□□ -0.87
PDLIM5-210ENST00000508216 S100A10P60903 97 aa9.63□□□□□ -0.87
PDLIM5-210ENST00000508216 ENDOGQ14249 297 aaKnown RBP9.63□□□□□ -0.87
PDLIM5-210ENST00000508216 GAB4Q2WGN9 574 aa9.63□□□□□ -0.87
PDLIM5-210ENST00000508216 TMEM69Q5SWH9 247 aa9.63□□□□□ -0.87
PDLIM5-210ENST00000508216 C1orf189Q5VU69 101 aa9.63□□□□□ -0.87
PDLIM5-210ENST00000508216 RTN4RL2Q86UN3 420 aa9.63□□□□□ -0.87
PDLIM5-210ENST00000508216 FER1L6-AS1Q8NA97 138 aa9.63□□□□□ -0.87
PDLIM5-210ENST00000508216 OR10G3Q8NGC4 313 aa9.63□□□□□ -0.87
PDLIM5-210ENST00000508216 OR9K2Q8NGE7 335 aa9.63□□□□□ -0.87
PDLIM5-210ENST00000508216 OR52E1Q8NGJ3 308 aa9.63□□□□□ -0.87
PDLIM5-210ENST00000508216 GPR119Q8TDV5 335 aa9.63□□□□□ -0.87
PDLIM5-210ENST00000508216 FAM3CQ92520 227 aa9.63□□□□□ -0.87
PDLIM5-210ENST00000508216 DVL3Q92997 716 aaPredicted RBP9.63□□□□□ -0.87
PDLIM5-210ENST00000508216 CCDC74AQ96AQ1 378 aa9.63□□□□□ -0.87
PDLIM5-210ENST00000508216 HAVCR1Q96D42 359 aa9.63□□□□□ -0.87
PDLIM5-210ENST00000508216 SMIM10Q96HG1 83 aa9.63□□□□□ -0.87
PDLIM5-210ENST00000508216 SIGLEC12Q96PQ1 595 aa9.63□□□□□ -0.87
PDLIM5-210ENST00000508216 MED10Q9BTT4 135 aa9.63□□□□□ -0.87
PDLIM5-210ENST00000508216 TAF9BQ9HBM6 251 aa9.63□□□□□ -0.87
PDLIM5-210ENST00000508216 CISHQ9NSE2 258 aa9.63□□□□□ -0.87
PDLIM5-210ENST00000508216 C5AR2Q9P296 337 aa9.63□□□□□ -0.87
PDLIM5-210ENST00000508216 P2RX2Q9UBL9 471 aa9.63□□□□□ -0.87
PDLIM5-210ENST00000508216 KLK11Q9UBX7 282 aa9.63□□□□□ -0.87
PDLIM5-210ENST00000508216 ETV7Q9Y603 341 aa9.63□□□□□ -0.87
PDLIM5-210ENST00000508216 CHD3Q12873 2000 aaKnown RBP9.62□□□□□ -0.87
PDLIM5-210ENST00000508216 NUP210LQ5VU65 1888 aa9.62□□□□□ -0.87
PDLIM5-210ENST00000508216 MYLKQ15746 1914 aa9.62□□□□□ -0.87
PDLIM5-210ENST00000508216 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.62□□□□□ -0.87
PDLIM5-210ENST00000508216 H7BYZ3 331 aa9.62□□□□□ -0.87
PDLIM5-210ENST00000508216 HSD17B6O14756 317 aa9.62□□□□□ -0.87
PDLIM5-210ENST00000508216 ARL6IP5O75915 188 aa9.62□□□□□ -0.87
PDLIM5-210ENST00000508216 GLSO94925 669 aaPredicted RBP9.62□□□□□ -0.87
PDLIM5-210ENST00000508216 GJB5O95377 273 aa9.62□□□□□ -0.87
PDLIM5-210ENST00000508216 SEC11BP0C7V7 166 aa9.62□□□□□ -0.87
PDLIM5-210ENST00000508216 DANCRP0C864 163 aa9.62□□□□□ -0.87
PDLIM5-210ENST00000508216 OR12D1P0DN82 309 aa9.62□□□□□ -0.87
PDLIM5-210ENST00000508216 CMPK1P30085 196 aa9.62□□□□□ -0.87
PDLIM5-210ENST00000508216 MLF1P58340 268 aa9.62□□□□□ -0.87
PDLIM5-210ENST00000508216 LILRA4P59901 499 aa9.62□□□□□ -0.87
PDLIM5-210ENST00000508216 RELBQ01201 579 aa9.62□□□□□ -0.87
PDLIM5-210ENST00000508216 PRAMEF17Q5VTA0 474 aa9.62□□□□□ -0.87
PDLIM5-210ENST00000508216 UNQ5815/PRO19632Q6UWF5 114 aa9.62□□□□□ -0.87
PDLIM5-210ENST00000508216 NEGR1Q7Z3B1 354 aa9.62□□□□□ -0.87
PDLIM5-210ENST00000508216 WFDC8Q8IUA0 241 aa9.62□□□□□ -0.87
PDLIM5-210ENST00000508216 OR4D9Q8NGE8 314 aa9.62□□□□□ -0.87
PDLIM5-210ENST00000508216 OR51A2Q8NGJ7 313 aa9.62□□□□□ -0.87
PDLIM5-210ENST00000508216 MOAP1Q96BY2 351 aa9.62□□□□□ -0.87
PDLIM5-210ENST00000508216 SEH1LQ96EE3 360 aa9.62□□□□□ -0.87
PDLIM5-210ENST00000508216 MS4A10Q96PG2 267 aa9.62□□□□□ -0.87
PDLIM5-210ENST00000508216 VCX2Q9H322 139 aa9.62□□□□□ -0.87
PDLIM5-210ENST00000508216 OR52D1Q9H346 318 aa9.62□□□□□ -0.87
PDLIM5-210ENST00000508216 C4orf47A7E2U8 309 aa9.61□□□□□ -0.87
PDLIM5-210ENST00000508216 ZNF705FA8MVS1 300 aaPredicted RBP9.61□□□□□ -0.87
PDLIM5-210ENST00000508216 J3QRE1 110 aa9.61□□□□□ -0.87
PDLIM5-210ENST00000508216 PIRO00625 290 aa9.61□□□□□ -0.87
PDLIM5-210ENST00000508216 GRM6O15303 877 aa9.61□□□□□ -0.87
PDLIM5-210ENST00000508216 DUSP11O75319 330 aaKnown RBP9.61□□□□□ -0.87
PDLIM5-210ENST00000508216 GJB3O75712 270 aa9.61□□□□□ -0.87
PDLIM5-210ENST00000508216 RAD51DO75771 328 aa9.61□□□□□ -0.87
PDLIM5-210ENST00000508216 ZNF205O95201 554 aa9.61□□□□□ -0.87
PDLIM5-210ENST00000508216 SEMA4FO95754 770 aa9.61□□□□□ -0.87
PDLIM5-210ENST00000508216 IGHG4P01861 327 aa9.61□□□□□ -0.87
PDLIM5-210ENST00000508216 ZNF705DP0CH99 300 aaPredicted RBP9.61□□□□□ -0.87
PDLIM5-210ENST00000508216 ZNF705BP0CI00 300 aaPredicted RBP9.61□□□□□ -0.87
PDLIM5-210ENST00000508216 IGLC2P0DOY2 106 aa9.61□□□□□ -0.87
PDLIM5-210ENST00000508216 IGLC3P0DOY3 106 aa9.61□□□□□ -0.87
PDLIM5-210ENST00000508216 AZU1P20160 251 aa9.61□□□□□ -0.87
PDLIM5-210ENST00000508216 S100GP29377 79 aa9.61□□□□□ -0.87
PDLIM5-210ENST00000508216 ARRB1P49407 418 aaPredicted RBP9.61□□□□□ -0.87
PDLIM5-210ENST00000508216 HNRNPA3P51991 378 aaKnown RBP9.61□□□□□ -0.87
PDLIM5-210ENST00000508216 HMGCS2P54868 508 aa9.61□□□□□ -0.87
PDLIM5-210ENST00000508216 UBE2MP61081 183 aaKnown RBP9.61□□□□□ -0.87
PDLIM5-210ENST00000508216 FZD2Q14332 565 aa9.61□□□□□ -0.87
PDLIM5-210ENST00000508216 ZNF658BQ4V348 819 aaPredicted RBP9.61□□□□□ -0.87
PDLIM5-210ENST00000508216 MIDNQ504T8 468 aa9.61□□□□□ -0.87
PDLIM5-210ENST00000508216 FAM219BQ5XKK7 198 aa9.61□□□□□ -0.87
PDLIM5-210ENST00000508216 INO80CQ6PI98 192 aaPredicted RBP9.61□□□□□ -0.87
PDLIM5-210ENST00000508216 SMIM5Q71RC9 77 aa9.61□□□□□ -0.87
PDLIM5-210ENST00000508216 KLHDC1Q8N7A1 406 aa9.61□□□□□ -0.87
PDLIM5-210ENST00000508216 ZSCAN4Q8NAM6 433 aaPredicted RBP9.61□□□□□ -0.87
PDLIM5-210ENST00000508216 SLAMF6Q96DU3 332 aa9.61□□□□□ -0.87
PDLIM5-210ENST00000508216 S100A16Q96FQ6 103 aaKnown RBP9.61□□□□□ -0.87
PDLIM5-210ENST00000508216 MOB1AQ9H8S9 216 aa9.61□□□□□ -0.87
PDLIM5-210ENST00000508216 WDR54Q9H977 334 aa9.61□□□□□ -0.87
PDLIM5-210ENST00000508216 TMEM9BQ9NQ34 198 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms