RNA–Protein interactions for RNA: ENST00000507247.5

RNF4-208, Transcript of ring finger protein 4, humanhuman

TSL 1 (best)

Gene RNF4, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-208ENST00000507247 TAAR3PQ9P1P4 343 aa12.12□□□□□ -0.47
RNF4-208ENST00000507247 ARFGEF3Q5TH69 2177 aa12.11□□□□□ -0.47
RNF4-208ENST00000507247 LOC100506127A0A0U1RQW1 187 aa12.11□□□□□ -0.47
RNF4-208ENST00000507247 ZNF816-ZNF321PA0A0X1KG74 233 aa12.11□□□□□ -0.47
RNF4-208ENST00000507247 GATBO75879 557 aaKnown RBP12.11□□□□□ -0.47
RNF4-208ENST00000507247 CD2P06729 351 aa12.11□□□□□ -0.47
RNF4-208ENST00000507247 UCHL1P09936 223 aa12.11□□□□□ -0.47
RNF4-208ENST00000507247 ZNF20P17024 532 aa12.11□□□□□ -0.47
RNF4-208ENST00000507247 GALP22466 123 aa12.11□□□□□ -0.47
RNF4-208ENST00000507247 TTKP33981 857 aa12.11□□□□□ -0.47
RNF4-208ENST00000507247 TGFBR1P36897 503 aa12.11□□□□□ -0.47
RNF4-208ENST00000507247 SERPINF1P36955 418 aa12.11□□□□□ -0.47
RNF4-208ENST00000507247 TLE4Q04727 773 aa12.11□□□□□ -0.47
RNF4-208ENST00000507247 MST1LQ2TV78 715 aa12.11□□□□□ -0.47
RNF4-208ENST00000507247 ZBTB37Q5TC79 503 aa12.11□□□□□ -0.47
RNF4-208ENST00000507247 TMEM42Q69YG0 159 aa12.11□□□□□ -0.47
RNF4-208ENST00000507247 C22orf42Q6IC83 251 aa12.11□□□□□ -0.47
RNF4-208ENST00000507247 Q6ZR03 302 aa12.11□□□□□ -0.47
RNF4-208ENST00000507247 KRT74Q7RTS7 529 aa12.11□□□□□ -0.47
RNF4-208ENST00000507247 ANKRD13BQ86YJ7 626 aa12.11□□□□□ -0.47
RNF4-208ENST00000507247 CLVS1Q8IUQ0 354 aaPredicted RBP12.11□□□□□ -0.47
RNF4-208ENST00000507247 OR8G5Q8NG78 346 aa12.11□□□□□ -0.47
RNF4-208ENST00000507247 PIGCQ92535 297 aa12.11□□□□□ -0.47
RNF4-208ENST00000507247 DVL3Q92997 716 aaPredicted RBP12.11□□□□□ -0.47
RNF4-208ENST00000507247 ITFG2Q969R8 447 aa12.11□□□□□ -0.47
RNF4-208ENST00000507247 C10orf35Q96D05 121 aa12.11□□□□□ -0.47
RNF4-208ENST00000507247 CENPOQ9BU64 300 aa12.11□□□□□ -0.47
RNF4-208ENST00000507247 PAPOLGQ9BWT3 736 aaKnown RBP12.11□□□□□ -0.47
RNF4-208ENST00000507247 CHST5Q9GZS9 411 aa12.11□□□□□ -0.47
RNF4-208ENST00000507247 MSL2Q9HCI7 577 aa12.11□□□□□ -0.47
RNF4-208ENST00000507247 TAS2R4Q9NYW5 299 aa12.11□□□□□ -0.47
RNF4-208ENST00000507247 GPR160Q9UJ42 338 aa12.11□□□□□ -0.47
RNF4-208ENST00000507247 ENPP5Q9UJA9 477 aa12.11□□□□□ -0.47
RNF4-208ENST00000507247 SSR3Q9UNL2 185 aa12.11□□□□□ -0.47
RNF4-208ENST00000507247 ROS1P08922 2347 aa12.1□□□□□ -0.47
RNF4-208ENST00000507247 TRAV8-7A0A075B6U6 113 aa12.1□□□□□ -0.47
RNF4-208ENST00000507247 A0A1W2PPW3 197 aa12.1□□□□□ -0.47
RNF4-208ENST00000507247 SHISA3A0PJX4 238 aa12.1□□□□□ -0.47
RNF4-208ENST00000507247 DPPA5A6NC42 116 aa12.1□□□□□ -0.47
RNF4-208ENST00000507247 ZSCAN5BA6NJL1 495 aa12.1□□□□□ -0.47
RNF4-208ENST00000507247 ZNF850A8MQ14 1090 aa12.1□□□□□ -0.47
RNF4-208ENST00000507247 AIREO43918 545 aa12.1□□□□□ -0.47
RNF4-208ENST00000507247 GABARAPO95166 117 aa12.1□□□□□ -0.47
RNF4-208ENST00000507247 CST4P01036 141 aa12.1□□□□□ -0.47
RNF4-208ENST00000507247 DANCRP0C864 163 aa12.1□□□□□ -0.47
RNF4-208ENST00000507247 FSTP19883 344 aa12.1□□□□□ -0.47
RNF4-208ENST00000507247 CA6P23280 308 aa12.1□□□□□ -0.47
RNF4-208ENST00000507247 MAPK3P27361 379 aaPredicted RBP12.1□□□□□ -0.47
RNF4-208ENST00000507247 FGF9P31371 208 aaPredicted RBP12.1□□□□□ -0.47
RNF4-208ENST00000507247 GNALP38405 381 aa12.1□□□□□ -0.47
RNF4-208ENST00000507247 ALDH3B1P43353 468 aa12.1□□□□□ -0.47
RNF4-208ENST00000507247 MMP15P51511 669 aa12.1□□□□□ -0.47
RNF4-208ENST00000507247 LSM3P62310 102 aaKnown RBP12.1□□□□□ -0.47
RNF4-208ENST00000507247 PRDX4Q13162 271 aa12.1□□□□□ -0.47
RNF4-208ENST00000507247 EFNB3Q15768 340 aa12.1□□□□□ -0.47
RNF4-208ENST00000507247 TIMM50Q3ZCQ8 353 aa12.1□□□□□ -0.47
RNF4-208ENST00000507247 CLVS2Q5SYC1 327 aa12.1□□□□□ -0.47
RNF4-208ENST00000507247 OR51A2Q8NGJ7 313 aa12.1□□□□□ -0.47
RNF4-208ENST00000507247 SLC30A2Q9BRI3 323 aa12.1□□□□□ -0.47
RNF4-208ENST00000507247 FGF23Q9GZV9 251 aaPredicted RBP12.1□□□□□ -0.47
RNF4-208ENST00000507247 RBM38Q9H0Z9 239 aaKnown RBP12.1□□□□□ -0.47
RNF4-208ENST00000507247 CLEC4MQ9H2X3 399 aaPredicted RBP12.1□□□□□ -0.47
RNF4-208ENST00000507247 UBTD1Q9HAC8 227 aa12.1□□□□□ -0.47
RNF4-208ENST00000507247 GPR173Q9NS66 373 aa12.1□□□□□ -0.47
RNF4-208ENST00000507247 MRPL15Q9P015 296 aaKnown RBP12.1□□□□□ -0.47
RNF4-208ENST00000507247 CEPT1Q9Y6K0 416 aa12.1□□□□□ -0.47
RNF4-208ENST00000507247 SPTAN1Q13813 2472 aaKnown RBP12.1□□□□□ -0.47
RNF4-208ENST00000507247 IGKV1-9A0A0C4DH69 117 aa12.09□□□□□ -0.47
RNF4-208ENST00000507247 A0A1B0GWJ7 208 aa12.09□□□□□ -0.47
RNF4-208ENST00000507247 ANKRD30BLA7E2S9 258 aa12.09□□□□□ -0.47
RNF4-208ENST00000507247 VSTM5A8MXK1 200 aa12.09□□□□□ -0.47
RNF4-208ENST00000507247 H0YL77 283 aa12.09□□□□□ -0.47
RNF4-208ENST00000507247 MLNRO43193 412 aa12.09□□□□□ -0.47
RNF4-208ENST00000507247 GMDSO60547 372 aa12.09□□□□□ -0.47
RNF4-208ENST00000507247 NRASP01111 189 aa12.09□□□□□ -0.47
RNF4-208ENST00000507247 CD8AP01732 235 aa12.09□□□□□ -0.47
RNF4-208ENST00000507247 RAF1P04049 648 aa12.09□□□□□ -0.47
RNF4-208ENST00000507247 SOD3P08294 240 aa12.09□□□□□ -0.47
RNF4-208ENST00000507247 IGFBP3P17936 291 aaPredicted RBP12.09□□□□□ -0.47
RNF4-208ENST00000507247 EVX1P49640 407 aa12.09□□□□□ -0.47
RNF4-208ENST00000507247 SELENOVP59797 346 aa12.09□□□□□ -0.47
RNF4-208ENST00000507247 NCS1P62166 190 aa12.09□□□□□ -0.47
RNF4-208ENST00000507247 UBE2V2Q15819 145 aa12.09□□□□□ -0.47
RNF4-208ENST00000507247 CTF1Q16619 201 aa12.09□□□□□ -0.47
RNF4-208ENST00000507247 NKPD1Q17RQ9 610 aa12.09□□□□□ -0.47
RNF4-208ENST00000507247 SWI5Q1ZZU3 235 aa12.09□□□□□ -0.47
RNF4-208ENST00000507247 HSD17B12Q53GQ0 312 aa12.09□□□□□ -0.47
RNF4-208ENST00000507247 CEP78Q5JTW2 689 aa12.09□□□□□ -0.47
RNF4-208ENST00000507247 ZNF787Q6DD87 383 aa12.09□□□□□ -0.47
RNF4-208ENST00000507247 ZNF529Q6P280 563 aa12.09□□□□□ -0.47
RNF4-208ENST00000507247 PAMR1Q6UXH9 720 aa12.09□□□□□ -0.47
RNF4-208ENST00000507247 GDPGP1Q6ZNW5 385 aa12.09□□□□□ -0.47
RNF4-208ENST00000507247 UTS2BQ765I0 119 aa12.09□□□□□ -0.47
RNF4-208ENST00000507247 SERPINA12Q8IW75 414 aa12.09□□□□□ -0.47
RNF4-208ENST00000507247 FBXL14Q8N1E6 418 aa12.09□□□□□ -0.47
RNF4-208ENST00000507247 MUC15Q8N387 334 aa12.09□□□□□ -0.47
RNF4-208ENST00000507247 OR13C9Q8NGT0 318 aa12.09□□□□□ -0.47
RNF4-208ENST00000507247 HPSE2Q8WWQ2 592 aa12.09□□□□□ -0.47
RNF4-208ENST00000507247 PP6455Q8WZ26 134 aa12.09□□□□□ -0.47
RNF4-208ENST00000507247 PHYHIPQ92561 330 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms