RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 COPEO14579 308 aa5.65□□□□□ -1.5
VCAN-207ENST00000507162 CDIPTO14735 213 aa5.65□□□□□ -1.5
VCAN-207ENST00000507162 LYPD3O95274 346 aa5.65□□□□□ -1.5
VCAN-207ENST00000507162 AMY1AP04745 511 aa5.65□□□□□ -1.5
VCAN-207ENST00000507162 AMY2AP04746 511 aa5.65□□□□□ -1.5
VCAN-207ENST00000507162 ALDH3A1P30838 453 aa5.65□□□□□ -1.5
VCAN-207ENST00000507162 SDHAP31040 664 aa5.65□□□□□ -1.5
VCAN-207ENST00000507162 RPL31P62899 125 aaKnown RBP5.65□□□□□ -1.5
VCAN-207ENST00000507162 SLC35B1P78383 322 aa5.65□□□□□ -1.5
VCAN-207ENST00000507162 RSPO1Q2MKA7 263 aaPredicted RBP5.65□□□□□ -1.5
VCAN-207ENST00000507162 ALG10Q5BKT4 473 aa5.65□□□□□ -1.5
VCAN-207ENST00000507162 WDR82Q6UXN9 313 aa5.65□□□□□ -1.5
VCAN-207ENST00000507162 CFAP77Q6ZQR2 320 aa5.65□□□□□ -1.5
VCAN-207ENST00000507162 ZNF429Q86V71 674 aa5.65□□□□□ -1.5
VCAN-207ENST00000507162 GLB1L2Q8IW92 636 aa5.65□□□□□ -1.5
VCAN-207ENST00000507162 OR1M1Q8NGA1 313 aa5.65□□□□□ -1.5
VCAN-207ENST00000507162 PFN4Q8NHR9 129 aa5.65□□□□□ -1.5
VCAN-207ENST00000507162 LRRC8CQ8TDW0 803 aa5.65□□□□□ -1.5
VCAN-207ENST00000507162 CHPT1Q8WUD6 406 aa5.65□□□□□ -1.5
VCAN-207ENST00000507162 IFT81Q8WYA0 676 aa5.65□□□□□ -1.5
VCAN-207ENST00000507162 SGTBQ96EQ0 304 aa5.65□□□□□ -1.5
VCAN-207ENST00000507162 ZBTB18Q99592 522 aa5.65□□□□□ -1.5
VCAN-207ENST00000507162 LIN7BQ9HAP6 207 aa5.65□□□□□ -1.5
VCAN-207ENST00000507162 MEPEQ9NQ76 525 aaPredicted RBP5.65□□□□□ -1.5
VCAN-207ENST00000507162 KIAA1456Q9P272 454 aa5.65□□□□□ -1.5
VCAN-207ENST00000507162 N6AMT1Q9Y5N5 214 aa5.65□□□□□ -1.5
VCAN-207ENST00000507162 SIRT4Q9Y6E7 314 aaPredicted RBP5.65□□□□□ -1.5
VCAN-207ENST00000507162 KIAA2026Q5HYC2 2103 aa5.65□□□□□ -1.51
VCAN-207ENST00000507162 TRAPPC13A5PLN9 417 aa5.64□□□□□ -1.51
VCAN-207ENST00000507162 CXorf65A6NEN9 183 aa5.64□□□□□ -1.51
VCAN-207ENST00000507162 A6NIZ1 184 aa5.64□□□□□ -1.51
VCAN-207ENST00000507162 SERPINE3A8MV23 424 aa5.64□□□□□ -1.51
VCAN-207ENST00000507162 POLR3GO15318 223 aaPredicted RBP5.64□□□□□ -1.51
VCAN-207ENST00000507162 ZSCAN12O43309 604 aa5.64□□□□□ -1.51
VCAN-207ENST00000507162 AKR7A2O43488 359 aa5.64□□□□□ -1.51
VCAN-207ENST00000507162 SAP30O75446 220 aa5.64□□□□□ -1.51
VCAN-207ENST00000507162 SERPINB7O75635 380 aa5.64□□□□□ -1.51
VCAN-207ENST00000507162 MT-ND1P03886 318 aa5.64□□□□□ -1.51
VCAN-207ENST00000507162 ACSM4P0C7M7 580 aa5.64□□□□□ -1.51
VCAN-207ENST00000507162 AQP1P29972 269 aa5.64□□□□□ -1.51
VCAN-207ENST00000507162 IDH3AP50213 366 aa5.64□□□□□ -1.51
VCAN-207ENST00000507162 RAP1BP61224 184 aa5.64□□□□□ -1.51
VCAN-207ENST00000507162 RAP1AP62834 184 aa5.64□□□□□ -1.51
VCAN-207ENST00000507162 PMS2P11Q13670 270 aa5.64□□□□□ -1.51
VCAN-207ENST00000507162 RNLSQ5VYX0 342 aa5.64□□□□□ -1.51
VCAN-207ENST00000507162 ZNF770Q6IQ21 691 aaPredicted RBP5.64□□□□□ -1.51
VCAN-207ENST00000507162 REEP3Q6NUK4 255 aa5.64□□□□□ -1.51
VCAN-207ENST00000507162 C8orf74Q6P047 294 aa5.64□□□□□ -1.51
VCAN-207ENST00000507162 SLC2A7Q6PXP3 512 aa5.64□□□□□ -1.51
VCAN-207ENST00000507162 CORO6Q6QEF8 472 aa5.64□□□□□ -1.51
VCAN-207ENST00000507162 TMPRSS11FQ6ZWK6 438 aa5.64□□□□□ -1.51
VCAN-207ENST00000507162 WDR86Q86TI4 376 aa5.64□□□□□ -1.51
VCAN-207ENST00000507162 RBM45Q8IUH3 476 aaKnown RBP5.64□□□□□ -1.51
VCAN-207ENST00000507162 SGPP2Q8IWX5 399 aa5.64□□□□□ -1.51
VCAN-207ENST00000507162 Q8N3U1 123 aa5.64□□□□□ -1.51
VCAN-207ENST00000507162 DPP10Q8N608 796 aa5.64□□□□□ -1.51
VCAN-207ENST00000507162 SMYD1Q8NB12 490 aa5.64□□□□□ -1.51
VCAN-207ENST00000507162 GJC3Q8NFK1 279 aa5.64□□□□□ -1.51
VCAN-207ENST00000507162 OR2T27Q8NH04 317 aa5.64□□□□□ -1.51
VCAN-207ENST00000507162 ANGPTL6Q8NI99 470 aa5.64□□□□□ -1.51
VCAN-207ENST00000507162 VPS33AQ96AX1 596 aa5.64□□□□□ -1.51
VCAN-207ENST00000507162 MPP4Q96JB8 637 aa5.64□□□□□ -1.51
VCAN-207ENST00000507162 RBM14Q96PK6 669 aaKnown RBP5.64□□□□□ -1.51
VCAN-207ENST00000507162 RAB3IPQ96QF0 476 aaPredicted RBP5.64□□□□□ -1.51
VCAN-207ENST00000507162 COQ7Q99807 217 aa5.64□□□□□ -1.51
VCAN-207ENST00000507162 DNTTIP1Q9H147 329 aa5.64□□□□□ -1.51
VCAN-207ENST00000507162 GRPEL1Q9HAV7 217 aa5.64□□□□□ -1.51
VCAN-207ENST00000507162 ISYNA1Q9NPH2 558 aa5.64□□□□□ -1.51
VCAN-207ENST00000507162 C19orf73Q9NVV2 129 aa5.64□□□□□ -1.51
VCAN-207ENST00000507162 USE1Q9NZ43 259 aa5.64□□□□□ -1.51
VCAN-207ENST00000507162 PSMC3IPQ9P2W1 217 aaPredicted RBP5.64□□□□□ -1.51
VCAN-207ENST00000507162 COA3Q9Y2R0 106 aaPredicted RBP5.64□□□□□ -1.51
VCAN-207ENST00000507162 DMBT1Q9UGM3 2413 aaPredicted RBP5.64□□□□□ -1.51
VCAN-207ENST00000507162 MEX3AA1L020 520 aaKnown RBP5.63□□□□□ -1.51
VCAN-207ENST00000507162 OR2AT4A6NND4 320 aa5.63□□□□□ -1.51
VCAN-207ENST00000507162 ANKRD30BLA7E2S9 258 aa5.63□□□□□ -1.51
VCAN-207ENST00000507162 ODF3BA8MYP8 253 aa5.63□□□□□ -1.51
VCAN-207ENST00000507162 CLIC1O00299 241 aa5.63□□□□□ -1.51
VCAN-207ENST00000507162 SLC22A2O15244 555 aa5.63□□□□□ -1.51
VCAN-207ENST00000507162 SLC16A7O60669 478 aa5.63□□□□□ -1.51
VCAN-207ENST00000507162 OR2F2O95006 317 aa5.63□□□□□ -1.51
VCAN-207ENST00000507162 BRI3O95415 125 aa5.63□□□□□ -1.51
VCAN-207ENST00000507162 SPARCP09486 303 aa5.63□□□□□ -1.51
VCAN-207ENST00000507162 LBPP18428 481 aa5.63□□□□□ -1.51
VCAN-207ENST00000507162 BRS3P32247 399 aa5.63□□□□□ -1.51
VCAN-207ENST00000507162 GNALP38405 381 aa5.63□□□□□ -1.51
VCAN-207ENST00000507162 LSM6P62312 80 aaKnown RBP5.63□□□□□ -1.51
VCAN-207ENST00000507162 CBX1P83916 185 aa5.63□□□□□ -1.51
VCAN-207ENST00000507162 CDK6Q00534 326 aa5.63□□□□□ -1.51
VCAN-207ENST00000507162 SPIBQ01892 262 aa5.63□□□□□ -1.51
VCAN-207ENST00000507162 ZNF92Q03936 586 aa5.63□□□□□ -1.51
VCAN-207ENST00000507162 GABPB1Q06547 395 aaPredicted RBP5.63□□□□□ -1.51
VCAN-207ENST00000507162 KRT72Q14CN4 511 aa5.63□□□□□ -1.51
VCAN-207ENST00000507162 C6orf10Q5SRN2 563 aa5.63□□□□□ -1.51
VCAN-207ENST00000507162 GCNT6Q5T4J0 391 aa5.63□□□□□ -1.51
VCAN-207ENST00000507162 ZNF626Q68DY1 528 aa5.63□□□□□ -1.51
VCAN-207ENST00000507162 TEX38Q6PEX7 206 aa5.63□□□□□ -1.51
VCAN-207ENST00000507162 ACP7Q6ZNF0 438 aa5.63□□□□□ -1.51
VCAN-207ENST00000507162 COMMD1Q8N668 190 aa5.63□□□□□ -1.51
VCAN-207ENST00000507162 OR11H1Q8NG94 326 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms