RNA–Protein interactions for RNA: ENST00000506941.1

NPHP4-210, Transcript of nephrocystin 4, humanhuman

TSL 4

Gene NPHP4, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-210ENST00000506941 ACTA2P62736 377 aa15.33■□□□□ 0.04
NPHP4-210ENST00000506941 ACTG2P63267 376 aa15.33■□□□□ 0.04
NPHP4-210ENST00000506941 MVKQ03426 396 aa15.33■□□□□ 0.04
NPHP4-210ENST00000506941 MPPED2Q15777 294 aa15.33■□□□□ 0.04
NPHP4-210ENST00000506941 ODF4Q2M2E3 257 aa15.33■□□□□ 0.04
NPHP4-210ENST00000506941 CLEC9AQ6UXN8 241 aa15.33■□□□□ 0.04
NPHP4-210ENST00000506941 IZUMO2Q6UXV1 221 aa15.33■□□□□ 0.04
NPHP4-210ENST00000506941 KCTD20Q7Z5Y7 419 aa15.33■□□□□ 0.04
NPHP4-210ENST00000506941 THAP5Q7Z6K1 395 aa15.33■□□□□ 0.04
NPHP4-210ENST00000506941 CELF2-AS1Q8N7Q2 184 aa15.33■□□□□ 0.04
NPHP4-210ENST00000506941 PLPP7Q8NBV4 271 aa15.33■□□□□ 0.04
NPHP4-210ENST00000506941 PELI1Q96FA3 418 aa15.33■□□□□ 0.04
NPHP4-210ENST00000506941 C4orf36Q96KX1 117 aa15.33■□□□□ 0.04
NPHP4-210ENST00000506941 PAPOLGQ9BWT3 736 aaKnown RBP15.33■□□□□ 0.04
NPHP4-210ENST00000506941 JAM3Q9BX67 310 aa15.33■□□□□ 0.04
NPHP4-210ENST00000506941 VCX3BQ9H321 246 aa15.33■□□□□ 0.04
NPHP4-210ENST00000506941 ISG20L2Q9H9L3 353 aaKnown RBP15.33■□□□□ 0.04
NPHP4-210ENST00000506941 INPP5EQ9NRR6 644 aa15.33■□□□□ 0.04
NPHP4-210ENST00000506941 TMEM106BQ9NUM4 274 aa15.33■□□□□ 0.04
NPHP4-210ENST00000506941 NOP16Q9Y3C1 178 aaKnown RBP15.33■□□□□ 0.04
NPHP4-210ENST00000506941 WIPI2Q9Y4P8 454 aa15.33■□□□□ 0.04
NPHP4-210ENST00000506941 ARHGAP32A7KAX9 2087 aa15.32■□□□□ 0.04
NPHP4-210ENST00000506941 J3QLW9 94 aa15.32■□□□□ 0.04
NPHP4-210ENST00000506941 XPNPEP2O43895 674 aa15.32■□□□□ 0.04
NPHP4-210ENST00000506941 PTBP3O95758 552 aaKnown RBP15.32■□□□□ 0.04
NPHP4-210ENST00000506941 CST4P01036 141 aa15.32■□□□□ 0.04
NPHP4-210ENST00000506941 ZNF19P17023 458 aa15.32■□□□□ 0.04
NPHP4-210ENST00000506941 MAP2K3P46734 347 aa15.32■□□□□ 0.04
NPHP4-210ENST00000506941 ETV1P50549 477 aa15.32■□□□□ 0.04
NPHP4-210ENST00000506941 CHN2P52757 468 aa15.32■□□□□ 0.04
NPHP4-210ENST00000506941 NANOS3P60323 173 aaKnown RBP15.32■□□□□ 0.04
NPHP4-210ENST00000506941 PRDX4Q13162 271 aa15.32■□□□□ 0.04
NPHP4-210ENST00000506941 Q71RC1 249 aaPredicted RBP15.32■□□□□ 0.04
NPHP4-210ENST00000506941 WDR86Q86TI4 376 aa15.32■□□□□ 0.04
NPHP4-210ENST00000506941 KLBQ86Z14 1044 aa15.32■□□□□ 0.04
NPHP4-210ENST00000506941 OR2G2Q8NGZ5 317 aa15.32■□□□□ 0.04
NPHP4-210ENST00000506941 GGHQ92820 318 aa15.32■□□□□ 0.04
NPHP4-210ENST00000506941 ITPKCQ96DU7 683 aa15.32■□□□□ 0.04
NPHP4-210ENST00000506941 FGF23Q9GZV9 251 aaPredicted RBP15.32■□□□□ 0.04
NPHP4-210ENST00000506941 SONP18583 2426 aaKnown RBP15.32■□□□□ 0.04
NPHP4-210ENST00000506941 NF1P21359 2839 aa15.31■□□□□ 0.04
NPHP4-210ENST00000506941 ZNF850A8MQ14 1090 aa15.31■□□□□ 0.04
NPHP4-210ENST00000506941 H3BSH0 61 aa15.31■□□□□ 0.04
NPHP4-210ENST00000506941 DHRS3O75911 302 aa15.31■□□□□ 0.04
NPHP4-210ENST00000506941 HEXAP06865 529 aa15.31■□□□□ 0.04
NPHP4-210ENST00000506941 IGHV4-31P0DP07 118 aa15.31■□□□□ 0.04
NPHP4-210ENST00000506941 FAHP16930 419 aa15.31■□□□□ 0.04
NPHP4-210ENST00000506941 CCL1P22362 96 aa15.31■□□□□ 0.04
NPHP4-210ENST00000506941 FDX2Q6P4F2 183 aa15.31■□□□□ 0.04
NPHP4-210ENST00000506941 Q6ZSR3 168 aa15.31■□□□□ 0.04
NPHP4-210ENST00000506941 KRT74Q7RTS7 529 aa15.31■□□□□ 0.04
NPHP4-210ENST00000506941 SYS1Q8N2H4 156 aa15.31■□□□□ 0.04
NPHP4-210ENST00000506941 SEMA6DQ8NFY4 1073 aa15.31■□□□□ 0.04
NPHP4-210ENST00000506941 CLDND2Q8NHS1 167 aa15.31■□□□□ 0.04
NPHP4-210ENST00000506941 UFSP2Q9NUQ7 469 aa15.31■□□□□ 0.04
NPHP4-210ENST00000506941 FRRS1LQ9P0K9 344 aa15.31■□□□□ 0.04
NPHP4-210ENST00000506941 DIMT1Q9UNQ2 313 aaKnown RBP15.31■□□□□ 0.04
NPHP4-210ENST00000506941 PIGLQ9Y2B2 252 aa15.31■□□□□ 0.04
NPHP4-210ENST00000506941 V9GYS6 101 aa15.31■□□□□ 0.04
NPHP4-210ENST00000506941 SETD2Q9BYW2 2564 aaPredicted RBP15.31■□□□□ 0.04
NPHP4-210ENST00000506941 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP15.3■□□□□ 0.04
NPHP4-210ENST00000506941 ZNF816-ZNF321PA0A0X1KG74 233 aa15.3■□□□□ 0.04
NPHP4-210ENST00000506941 TMEM178BH3BS89 294 aa15.3■□□□□ 0.04
NPHP4-210ENST00000506941 CYB5R3P00387 301 aaPredicted RBP15.3■□□□□ 0.04
NPHP4-210ENST00000506941 IGHV2-70P01814 119 aa15.3■□□□□ 0.04
NPHP4-210ENST00000506941 ATP6V1B1P15313 513 aa15.3■□□□□ 0.04
NPHP4-210ENST00000506941 DCKP27707 260 aa15.3■□□□□ 0.04
NPHP4-210ENST00000506941 GNALP38405 381 aa15.3■□□□□ 0.04
NPHP4-210ENST00000506941 HOXA4Q00056 320 aaPredicted RBP15.3■□□□□ 0.04
NPHP4-210ENST00000506941 SLC3A1Q07837 685 aa15.3■□□□□ 0.04
NPHP4-210ENST00000506941 RIPPLY1Q0D2K3 151 aa15.3■□□□□ 0.04
NPHP4-210ENST00000506941 SNCBQ16143 134 aa15.3■□□□□ 0.04
NPHP4-210ENST00000506941 FTMTQ8N4E7 242 aa15.3■□□□□ 0.04
NPHP4-210ENST00000506941 SPERTQ8NA61 448 aa15.3■□□□□ 0.04
NPHP4-210ENST00000506941 OR14K1Q8NGZ2 314 aa15.3■□□□□ 0.04
NPHP4-210ENST00000506941 OR8S1Q8NH09 359 aa15.3■□□□□ 0.04
NPHP4-210ENST00000506941 Q8TCH9 128 aa15.3■□□□□ 0.04
NPHP4-210ENST00000506941 HPSE2Q8WWQ2 592 aa15.3■□□□□ 0.04
NPHP4-210ENST00000506941 PIGCQ92535 297 aa15.3■□□□□ 0.04
NPHP4-210ENST00000506941 RAB1CQ92928 201 aa15.3■□□□□ 0.04
NPHP4-210ENST00000506941 MRPL48Q96GC5 212 aaKnown RBP15.3■□□□□ 0.04
NPHP4-210ENST00000506941 TIMD4Q96H15 378 aa15.3■□□□□ 0.04
NPHP4-210ENST00000506941 PLCXD1Q9NUJ7 323 aa15.3■□□□□ 0.04
NPHP4-210ENST00000506941 MPC1Q9Y5U8 109 aa15.3■□□□□ 0.04
NPHP4-210ENST00000506941 NPTNQ9Y639 398 aa15.3■□□□□ 0.04
NPHP4-210ENST00000506941 FN1P02751 2386 aaKnown RBP15.29■□□□□ 0.04
NPHP4-210ENST00000506941 LOC107986453A0A1B0GWG9 222 aa15.29■□□□□ 0.04
NPHP4-210ENST00000506941 E9PI62 339 aa15.29■□□□□ 0.04
NPHP4-210ENST00000506941 LMX1BO60663 402 aa15.29■□□□□ 0.04
NPHP4-210ENST00000506941 GRPP07492 148 aa15.29■□□□□ 0.04
NPHP4-210ENST00000506941 HTR1AP08908 422 aa15.29■□□□□ 0.04
NPHP4-210ENST00000506941 PIPP12273 146 aaPredicted RBP15.29■□□□□ 0.04
NPHP4-210ENST00000506941 MYF6P23409 242 aa15.29■□□□□ 0.04
NPHP4-210ENST00000506941 THBS2P35442 1172 aa15.29■□□□□ 0.04
NPHP4-210ENST00000506941 LMO4P61968 165 aa15.29■□□□□ 0.04
NPHP4-210ENST00000506941 ST3GAL4Q11206 333 aa15.29■□□□□ 0.04
NPHP4-210ENST00000506941 ZMYND11Q15326 602 aa15.29■□□□□ 0.04
NPHP4-210ENST00000506941 ZNF181Q2M3W8 571 aa15.29■□□□□ 0.04
NPHP4-210ENST00000506941 DMRTC1Q5HYR2 192 aa15.29■□□□□ 0.04
NPHP4-210ENST00000506941 ZBTB37Q5TC79 503 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms