RNA–Protein interactions for RNA: ENST00000506515.1

HERC4-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-213ENST00000506515 LINC00301Q8NCQ3 95 aa3.9□□□□□ -1.79
HERC4-213ENST00000506515 NPBQ8NG41 125 aa3.9□□□□□ -1.79
HERC4-213ENST00000506515 OR1N2Q8NGR9 330 aa3.9□□□□□ -1.79
HERC4-213ENST00000506515 KCNG3Q8TAE7 436 aa3.9□□□□□ -1.79
HERC4-213ENST00000506515 BLOC1S5Q8TDH9 187 aa3.9□□□□□ -1.79
HERC4-213ENST00000506515 TMEM158Q8WZ71 300 aa3.9□□□□□ -1.79
HERC4-213ENST00000506515 RARRES2Q99969 163 aa3.9□□□□□ -1.79
HERC4-213ENST00000506515 HDHD3Q9BSH5 251 aaPredicted RBP3.9□□□□□ -1.79
HERC4-213ENST00000506515 TCEAL2Q9H3H9 227 aaPredicted RBP3.9□□□□□ -1.79
HERC4-213ENST00000506515 XCL2Q9UBD3 114 aa3.9□□□□□ -1.79
HERC4-213ENST00000506515 CCDC168Q8NDH2 2452 aa3.9□□□□□ -1.79
HERC4-213ENST00000506515 MTORP42345 2549 aa3.9□□□□□ -1.79
HERC4-213ENST00000506515 MDC1Q14676 2089 aaKnown RBP3.9□□□□□ -1.79
HERC4-213ENST00000506515 SHANK1Q9Y566 2161 aa3.89□□□□□ -1.79
HERC4-213ENST00000506515 A0A0D9SEW6 157 aa3.89□□□□□ -1.79
HERC4-213ENST00000506515 FAM166BA8MTA8 275 aa3.89□□□□□ -1.79
HERC4-213ENST00000506515 K7ERQ8 282 aa3.89□□□□□ -1.79
HERC4-213ENST00000506515 PPP1R2P9O14990 202 aa3.89□□□□□ -1.79
HERC4-213ENST00000506515 UPK3AO75631 287 aa3.89□□□□□ -1.79
HERC4-213ENST00000506515 CIB2O75838 187 aa3.89□□□□□ -1.79
HERC4-213ENST00000506515 ZMPSTE24O75844 475 aa3.89□□□□□ -1.79
HERC4-213ENST00000506515 CST1P01037 141 aa3.89□□□□□ -1.79
HERC4-213ENST00000506515 CSF3P09919 207 aa3.89□□□□□ -1.79
HERC4-213ENST00000506515 IFNA8P32881 189 aa3.89□□□□□ -1.79
HERC4-213ENST00000506515 HSPA9P38646 679 aaKnown RBP3.89□□□□□ -1.79
HERC4-213ENST00000506515 ACTR1BP42025 376 aa3.89□□□□□ -1.79
HERC4-213ENST00000506515 LHX2P50458 406 aa3.89□□□□□ -1.79
HERC4-213ENST00000506515 TDGF1P3P51864 188 aa3.89□□□□□ -1.79
HERC4-213ENST00000506515 SUB1P53999 127 aaKnown RBP eCLIP3.89□□□□□ -1.79
HERC4-213ENST00000506515 FBXW4P57775 412 aa3.89□□□□□ -1.79
HERC4-213ENST00000506515 LRRC63Q05C16 580 aa3.89□□□□□ -1.79
HERC4-213ENST00000506515 LRRC74AQ0VAA2 488 aa3.89□□□□□ -1.79
HERC4-213ENST00000506515 CYB5R2Q6BCY4 276 aa3.89□□□□□ -1.79
HERC4-213ENST00000506515 RWDD4Q6NW29 188 aaKnown RBP3.89□□□□□ -1.79
HERC4-213ENST00000506515 ZYG11AQ6WRX3 759 aa3.89□□□□□ -1.79
HERC4-213ENST00000506515 SLC25A48Q6ZT89 311 aaKnown RBP3.89□□□□□ -1.79
HERC4-213ENST00000506515 STRADAQ7RTN6 431 aa3.89□□□□□ -1.79
HERC4-213ENST00000506515 ZNF429Q86V71 674 aa3.89□□□□□ -1.79
HERC4-213ENST00000506515 OR10G9Q8NGN4 311 aa3.89□□□□□ -1.79
HERC4-213ENST00000506515 OR6X1Q8NH79 312 aa3.89□□□□□ -1.79
HERC4-213ENST00000506515 SLC22A8Q8TCC7 542 aa3.89□□□□□ -1.79
HERC4-213ENST00000506515 DTX3LQ8TDB6 740 aa3.89□□□□□ -1.79
HERC4-213ENST00000506515 SGK3Q96BR1 496 aa3.89□□□□□ -1.79
HERC4-213ENST00000506515 ZNF799Q96GE5 643 aa3.89□□□□□ -1.79
HERC4-213ENST00000506515 C9orf72Q96LT7 481 aa3.89□□□□□ -1.79
HERC4-213ENST00000506515 OR2M4Q96R27 311 aa3.89□□□□□ -1.79
HERC4-213ENST00000506515 CTRCQ99895 268 aa3.89□□□□□ -1.79
HERC4-213ENST00000506515 TM6SF2Q9BZW4 377 aa3.89□□□□□ -1.79
HERC4-213ENST00000506515 SLC7A5P2Q9GIP4 190 aa3.89□□□□□ -1.79
HERC4-213ENST00000506515 FANCEQ9HB96 536 aa3.89□□□□□ -1.79
HERC4-213ENST00000506515 STMN3Q9NZ72 180 aa3.89□□□□□ -1.79
HERC4-213ENST00000506515 OR12D3Q9UGF7 316 aa3.89□□□□□ -1.79
HERC4-213ENST00000506515 SLC17A4Q9Y2C5 497 aa3.89□□□□□ -1.79
HERC4-213ENST00000506515 ANKHD1Q8IWZ3 2542 aaKnown RBP3.89□□□□□ -1.79
HERC4-213ENST00000506515 TRBV6-6A0A0A6YYG2 114 aa3.88□□□□□ -1.79
HERC4-213ENST00000506515 TSPAN11A1L157 253 aa3.88□□□□□ -1.79
HERC4-213ENST00000506515 ARGFXA6NJG6 315 aa3.88□□□□□ -1.79
HERC4-213ENST00000506515 C9J4A7 227 aa3.88□□□□□ -1.79
HERC4-213ENST00000506515 SLC31A2O15432 143 aa3.88□□□□□ -1.79
HERC4-213ENST00000506515 CA11O75493 328 aa3.88□□□□□ -1.79
HERC4-213ENST00000506515 SMC2O95347 1197 aa3.88□□□□□ -1.79
HERC4-213ENST00000506515 CT62P0C5K7 136 aa3.88□□□□□ -1.79
HERC4-213ENST00000506515 PSG2P11465 335 aa3.88□□□□□ -1.79
HERC4-213ENST00000506515 AZU1P20160 251 aa3.88□□□□□ -1.79
HERC4-213ENST00000506515 CNR1P21554 472 aa3.88□□□□□ -1.79
HERC4-213ENST00000506515 PEX19P40855 299 aa3.88□□□□□ -1.79
HERC4-213ENST00000506515 GPR1P46091 355 aa3.88□□□□□ -1.79
HERC4-213ENST00000506515 SUCLG1P53597 346 aaKnown RBP3.88□□□□□ -1.79
HERC4-213ENST00000506515 AP1S1P61966 158 aa3.88□□□□□ -1.79
HERC4-213ENST00000506515 LHFPL3Q86UP9 236 aa3.88□□□□□ -1.79
HERC4-213ENST00000506515 TMEM35BQ8NCS4 154 aa3.88□□□□□ -1.79
HERC4-213ENST00000506515 FDCSPQ8NFU4 85 aa3.88□□□□□ -1.79
HERC4-213ENST00000506515 OR51G1Q8NGK1 321 aa3.88□□□□□ -1.79
HERC4-213ENST00000506515 OR2G3Q8NGZ4 309 aa3.88□□□□□ -1.79
HERC4-213ENST00000506515 MCOLN3Q8TDD5 553 aa3.88□□□□□ -1.79
HERC4-213ENST00000506515 RNF185Q96GF1 192 aa3.88□□□□□ -1.79
HERC4-213ENST00000506515 CNDP1Q96KN2 507 aa3.88□□□□□ -1.79
HERC4-213ENST00000506515 SH3GL1Q99961 368 aa3.88□□□□□ -1.79
HERC4-213ENST00000506515 BLZF1Q9H2G9 400 aa3.88□□□□□ -1.79
HERC4-213ENST00000506515 ASF1BQ9NVP2 202 aa3.88□□□□□ -1.79
HERC4-213ENST00000506515 PSMC3IPQ9P2W1 217 aaPredicted RBP3.88□□□□□ -1.79
HERC4-213ENST00000506515 PACSIN2Q9UNF0 486 aaPredicted RBP3.88□□□□□ -1.79
HERC4-213ENST00000506515 CSDC2Q9Y534 153 aaKnown RBP3.88□□□□□ -1.79
HERC4-213ENST00000506515 MAP1AP78559 2803 aaPredicted RBP3.88□□□□□ -1.79
HERC4-213ENST00000506515 COL27A1Q8IZC6 1860 aaPredicted RBP3.88□□□□□ -1.79
HERC4-213ENST00000506515 NYNRINQ9P2P1 1898 aaKnown RBP3.88□□□□□ -1.79
HERC4-213ENST00000506515 PRRC2AP48634 2157 aaKnown RBP3.87□□□□□ -1.79
HERC4-213ENST00000506515 DOCK4Q8N1I0 1966 aa3.87□□□□□ -1.79
HERC4-213ENST00000506515 ABCA4P78363 2273 aa3.87□□□□□ -1.79
HERC4-213ENST00000506515 IGKV1D-13A0A0B4J2D9 117 aa3.87□□□□□ -1.79
HERC4-213ENST00000506515 GOLGA8OA6NCC3 632 aa3.87□□□□□ -1.79
HERC4-213ENST00000506515 KRTAP9-6A8MVA2 160 aa3.87□□□□□ -1.79
HERC4-213ENST00000506515 GOLGA8NF8WBI6 632 aa3.87□□□□□ -1.79
HERC4-213ENST00000506515 AP3B1O00203 1094 aa3.87□□□□□ -1.79
HERC4-213ENST00000506515 SOX15O60248 233 aa3.87□□□□□ -1.79
HERC4-213ENST00000506515 PNMA6AP0CW24 399 aaPredicted RBP3.87□□□□□ -1.79
HERC4-213ENST00000506515 IGKV1-13P0DP09 117 aa3.87□□□□□ -1.79
HERC4-213ENST00000506515 ZNF30P17039 623 aa3.87□□□□□ -1.79
HERC4-213ENST00000506515 NELFEP18615 380 aaKnown RBP3.87□□□□□ -1.79
HERC4-213ENST00000506515 SYT1P21579 422 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms