RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 ANXA8P13928 327 aa1.96□□□□□ -2.1
TOPBP1-204ENST00000505804 APLNRP35414 380 aa1.96□□□□□ -2.1
TOPBP1-204ENST00000505804 TGFBR1P36897 503 aa1.96□□□□□ -2.1
TOPBP1-204ENST00000505804 TAS2R43P59537 309 aa1.96□□□□□ -2.1
TOPBP1-204ENST00000505804 RPS11P62280 158 aaKnown RBP eCLIP1.96□□□□□ -2.1
TOPBP1-204ENST00000505804 ELF3P78545 371 aaPredicted RBP1.96□□□□□ -2.1
TOPBP1-204ENST00000505804 GBE1Q04446 702 aa1.96□□□□□ -2.1
TOPBP1-204ENST00000505804 BEX5Q5H9J7 111 aa1.96□□□□□ -2.1
TOPBP1-204ENST00000505804 ANXA8L1Q5VT79 327 aa1.96□□□□□ -2.1
TOPBP1-204ENST00000505804 DEGS2Q6QHC5 323 aa1.96□□□□□ -2.1
TOPBP1-204ENST00000505804 KATNAL2Q8IYT4 538 aa1.96□□□□□ -2.1
TOPBP1-204ENST00000505804 LRRC75AQ8NAA5 344 aa1.96□□□□□ -2.1
TOPBP1-204ENST00000505804 OR2Z1Q8NG97 314 aa1.96□□□□□ -2.1
TOPBP1-204ENST00000505804 ITFG1Q8TB96 612 aa1.96□□□□□ -2.1
TOPBP1-204ENST00000505804 ASZ1Q8WWH4 475 aa1.96□□□□□ -2.1
TOPBP1-204ENST00000505804 APH1AQ96BI3 265 aa1.96□□□□□ -2.1
TOPBP1-204ENST00000505804 C9orf72Q96LT7 481 aa1.96□□□□□ -2.1
TOPBP1-204ENST00000505804 SCGB3A2Q96PL1 93 aa1.96□□□□□ -2.1
TOPBP1-204ENST00000505804 MTG1Q9BT17 334 aaPredicted RBP1.96□□□□□ -2.1
TOPBP1-204ENST00000505804 ANGPTL4Q9BY76 406 aa1.96□□□□□ -2.1
TOPBP1-204ENST00000505804 DYRK4Q9NR20 520 aa1.96□□□□□ -2.1
TOPBP1-204ENST00000505804 MRPL22Q9NWU5 206 aaKnown RBP1.96□□□□□ -2.1
TOPBP1-204ENST00000505804 TAS2R5Q9NYW4 299 aa1.96□□□□□ -2.1
TOPBP1-204ENST00000505804 AHSPQ9NZD4 102 aa1.96□□□□□ -2.1
TOPBP1-204ENST00000505804 SIGLEC7Q9Y286 467 aa1.96□□□□□ -2.1
TOPBP1-204ENST00000505804 LOXHD1Q8IVV2 1947 aa1.95□□□□□ -2.1
TOPBP1-204ENST00000505804 SIGLEC1Q9BZZ2 1709 aa1.95□□□□□ -2.1
TOPBP1-204ENST00000505804 GOLGA8TH3BQL2 631 aa1.95□□□□□ -2.1
TOPBP1-204ENST00000505804 SCO1O75880 301 aa1.95□□□□□ -2.1
TOPBP1-204ENST00000505804 FGF4P08620 206 aa1.95□□□□□ -2.1
TOPBP1-204ENST00000505804 CD34P28906 385 aa1.95□□□□□ -2.1
TOPBP1-204ENST00000505804 MPV17P39210 176 aa1.95□□□□□ -2.1
TOPBP1-204ENST00000505804 GPR1P46091 355 aa1.95□□□□□ -2.1
TOPBP1-204ENST00000505804 IDH2P48735 452 aaKnown RBP1.95□□□□□ -2.1
TOPBP1-204ENST00000505804 PRKCDQ05655 676 aa1.95□□□□□ -2.1
TOPBP1-204ENST00000505804 ZNF33AQ06730 810 aa1.95□□□□□ -2.1
TOPBP1-204ENST00000505804 FAM53BQ14153 422 aa1.95□□□□□ -2.1
TOPBP1-204ENST00000505804 MAD2L1BPQ15013 274 aaPredicted RBP1.95□□□□□ -2.1
TOPBP1-204ENST00000505804 C6orf99Q4VX62 202 aa1.95□□□□□ -2.1
TOPBP1-204ENST00000505804 TMEM236Q5W0B7 351 aa1.95□□□□□ -2.1
TOPBP1-204ENST00000505804 OR2T5Q6IEZ7 315 aa1.95□□□□□ -2.1
TOPBP1-204ENST00000505804 C16orf47Q6ZP98 133 aaPredicted RBP1.95□□□□□ -2.1
TOPBP1-204ENST00000505804 TMEM136Q6ZRR5 245 aa1.95□□□□□ -2.1
TOPBP1-204ENST00000505804 FAM122BQ7Z309 247 aa1.95□□□□□ -2.1
TOPBP1-204ENST00000505804 KIF2BQ8N4N8 673 aa1.95□□□□□ -2.1
TOPBP1-204ENST00000505804 ZNF680Q8NEM1 530 aa1.95□□□□□ -2.1
TOPBP1-204ENST00000505804 C1orf64Q8NEQ6 169 aa1.95□□□□□ -2.1
TOPBP1-204ENST00000505804 OR2T29Q8NH02 315 aa1.95□□□□□ -2.1
TOPBP1-204ENST00000505804 ENKURQ8TC29 256 aa1.95□□□□□ -2.1
TOPBP1-204ENST00000505804 RCN3Q96D15 328 aa1.95□□□□□ -2.1
TOPBP1-204ENST00000505804 TEAD3Q99594 435 aa1.95□□□□□ -2.1
TOPBP1-204ENST00000505804 AGMATQ9BSE5 352 aa1.95□□□□□ -2.1
TOPBP1-204ENST00000505804 SHANK2-AS3Q9BTD1 123 aa1.95□□□□□ -2.1
TOPBP1-204ENST00000505804 NAA50Q9GZZ1 169 aaKnown RBP1.95□□□□□ -2.1
TOPBP1-204ENST00000505804 ZC4H2Q9NQZ6 224 aa1.95□□□□□ -2.1
TOPBP1-204ENST00000505804 FBXO8Q9NRD0 319 aa1.95□□□□□ -2.1
TOPBP1-204ENST00000505804 ZNF257Q9Y2Q1 563 aa1.95□□□□□ -2.1
TOPBP1-204ENST00000505804 SEC16AO15027 2179 aa1.95□□□□□ -2.1
TOPBP1-204ENST00000505804 PHLPP2Q6ZVD8 1323 aa1.94□□□□□ -2.1
TOPBP1-204ENST00000505804 IGKV2-24A0A0C4DH68 120 aa1.94□□□□□ -2.1
TOPBP1-204ENST00000505804 ISPDA4D126 451 aa1.94□□□□□ -2.1
TOPBP1-204ENST00000505804 SUPT3HB4E1H0 165 aa1.94□□□□□ -2.1
TOPBP1-204ENST00000505804 PRAMEF26H0Y7S4 382 aa1.94□□□□□ -2.1
TOPBP1-204ENST00000505804 SIVA1O15304 175 aa1.94□□□□□ -2.1
TOPBP1-204ENST00000505804 CTNSO60931 367 aa1.94□□□□□ -2.1
TOPBP1-204ENST00000505804 MPDU1O75352 247 aa1.94□□□□□ -2.1
TOPBP1-204ENST00000505804 OR1G1P47890 313 aa1.94□□□□□ -2.1
TOPBP1-204ENST00000505804 OR2B8PP59922 312 aa1.94□□□□□ -2.1
TOPBP1-204ENST00000505804 FLI1Q01543 452 aaPredicted RBP1.94□□□□□ -2.1
TOPBP1-204ENST00000505804 OR1Q1Q15612 314 aa1.94□□□□□ -2.1
TOPBP1-204ENST00000505804 SPIN3Q5JUX0 258 aa1.94□□□□□ -2.1
TOPBP1-204ENST00000505804 MFSD14CQ5VZR4 134 aa1.94□□□□□ -2.1
TOPBP1-204ENST00000505804 KDM4DQ6B0I6 523 aa1.94□□□□□ -2.1
TOPBP1-204ENST00000505804 TBPL2Q6SJ96 375 aa1.94□□□□□ -2.1
TOPBP1-204ENST00000505804 SGPP2Q8IWX5 399 aa1.94□□□□□ -2.1
TOPBP1-204ENST00000505804 TMEM159Q96B96 161 aa1.94□□□□□ -2.1
TOPBP1-204ENST00000505804 EMC6Q9BV81 110 aa1.94□□□□□ -2.1
TOPBP1-204ENST00000505804 SFXN3Q9BWM7 321 aa1.94□□□□□ -2.1
TOPBP1-204ENST00000505804 CLSTN2Q9H4D0 955 aa1.94□□□□□ -2.1
TOPBP1-204ENST00000505804 CD209Q9NNX6 404 aa1.94□□□□□ -2.1
TOPBP1-204ENST00000505804 ZNF229Q9UJW7 825 aa1.94□□□□□ -2.1
TOPBP1-204ENST00000505804 DDX19BQ9UMR2 479 aa1.94□□□□□ -2.1
TOPBP1-204ENST00000505804 NID2Q14112 1375 aa1.94□□□□□ -2.1
TOPBP1-204ENST00000505804 SHROOM3Q8TF72 1996 aa1.94□□□□□ -2.1
TOPBP1-204ENST00000505804 COL5A1P20908 1838 aaPredicted RBP1.94□□□□□ -2.1
TOPBP1-204ENST00000505804 HIVEP2P31629 2446 aa1.93□□□□□ -2.1
TOPBP1-204ENST00000505804 CCL15-CCL14A0A0B4J2E2 113 aa1.93□□□□□ -2.1
TOPBP1-204ENST00000505804 CENPBD1B2RD01 187 aa1.93□□□□□ -2.1
TOPBP1-204ENST00000505804 PSPHP1O15172 72 aa1.93□□□□□ -2.1
TOPBP1-204ENST00000505804 OR7C2O60412 319 aa1.93□□□□□ -2.1
TOPBP1-204ENST00000505804 HMMRO75330 724 aa1.93□□□□□ -2.1
TOPBP1-204ENST00000505804 SCELO95171 688 aa1.93□□□□□ -2.1
TOPBP1-204ENST00000505804 CATP04040 527 aaKnown RBP1.93□□□□□ -2.1
TOPBP1-204ENST00000505804 TACSTD2P09758 323 aa1.93□□□□□ -2.1
TOPBP1-204ENST00000505804 THRAP10827 490 aa1.93□□□□□ -2.1
TOPBP1-204ENST00000505804 COL8A2P25067 703 aa1.93□□□□□ -2.1
TOPBP1-204ENST00000505804 GALR1P47211 349 aa1.93□□□□□ -2.1
TOPBP1-204ENST00000505804 CLDN18P56856 261 aa1.93□□□□□ -2.1
TOPBP1-204ENST00000505804 KDSRQ06136 332 aa1.93□□□□□ -2.1
TOPBP1-204ENST00000505804 DNAJC3Q13217 504 aa1.93□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms