RNA–Protein interactions for RNA: ENST00000504489.3

PDLIM5-208, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4 BASIC

Gene PDLIM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-208ENST00000504489 ZNF485Q8NCK3 441 aa10.11□□□□□ -0.79
PDLIM5-208ENST00000504489 CCDC54Q8NEL0 328 aa10.11□□□□□ -0.79
PDLIM5-208ENST00000504489 OR2Z1Q8NG97 314 aa10.11□□□□□ -0.79
PDLIM5-208ENST00000504489 UBASH3BQ8TF42 649 aa10.11□□□□□ -0.79
PDLIM5-208ENST00000504489 ELMOD3Q96FG2 381 aa10.11□□□□□ -0.79
PDLIM5-208ENST00000504489 SOX7Q9BT81 388 aa10.11□□□□□ -0.79
PDLIM5-208ENST00000504489 CDCA4Q9BXL8 241 aa10.11□□□□□ -0.79
PDLIM5-208ENST00000504489 EGLN1Q9GZT9 426 aa10.11□□□□□ -0.79
PDLIM5-208ENST00000504489 DECR2Q9NUI1 292 aa10.11□□□□□ -0.79
PDLIM5-208ENST00000504489 PAK1IP1Q9NWT1 392 aaPredicted RBP10.11□□□□□ -0.79
PDLIM5-208ENST00000504489 UBAP1Q9NZ09 502 aa10.11□□□□□ -0.79
PDLIM5-208ENST00000504489 FRRS1LQ9P0K9 344 aa10.11□□□□□ -0.79
PDLIM5-208ENST00000504489 IL19Q9UHD0 177 aa10.11□□□□□ -0.79
PDLIM5-208ENST00000504489 OTOGQ6ZRI0 2925 aa10.1□□□□□ -0.79
PDLIM5-208ENST00000504489 DHRS7CA6NNS2 312 aa10.1□□□□□ -0.79
PDLIM5-208ENST00000504489 ANKRD30BLA7E2S9 258 aa10.1□□□□□ -0.79
PDLIM5-208ENST00000504489 E9PI62 339 aa10.1□□□□□ -0.79
PDLIM5-208ENST00000504489 H0YL77 283 aa10.1□□□□□ -0.79
PDLIM5-208ENST00000504489 P2RY10O00398 339 aa10.1□□□□□ -0.79
PDLIM5-208ENST00000504489 DHRS3O75911 302 aa10.1□□□□□ -0.79
PDLIM5-208ENST00000504489 LY6HO94772 140 aa10.1□□□□□ -0.79
PDLIM5-208ENST00000504489 CST4P01036 141 aa10.1□□□□□ -0.79
PDLIM5-208ENST00000504489 RPSAP08865 295 aaKnown RBP10.1□□□□□ -0.79
PDLIM5-208ENST00000504489 CSF3P09919 207 aa10.1□□□□□ -0.79
PDLIM5-208ENST00000504489 UBCP0CG48 685 aaKnown RBP10.1□□□□□ -0.79
PDLIM5-208ENST00000504489 CA6P23280 308 aa10.1□□□□□ -0.79
PDLIM5-208ENST00000504489 TNFAIP6P98066 277 aaPredicted RBP10.1□□□□□ -0.79
PDLIM5-208ENST00000504489 CCDC58Q4VC31 144 aa10.1□□□□□ -0.79
PDLIM5-208ENST00000504489 TMEM244Q5VVB8 128 aa10.1□□□□□ -0.79
PDLIM5-208ENST00000504489 SPNS3Q6ZMD2 512 aa10.1□□□□□ -0.79
PDLIM5-208ENST00000504489 DOK3Q7L591 496 aa10.1□□□□□ -0.79
PDLIM5-208ENST00000504489 COMMD2Q86X83 199 aa10.1□□□□□ -0.79
PDLIM5-208ENST00000504489 ZNF786Q8N393 782 aa10.1□□□□□ -0.79
PDLIM5-208ENST00000504489 CELF2-AS1Q8N7Q2 184 aa10.1□□□□□ -0.79
PDLIM5-208ENST00000504489 NANOGP1Q8N7R0 232 aa10.1□□□□□ -0.79
PDLIM5-208ENST00000504489 SPERTQ8NA61 448 aa10.1□□□□□ -0.79
PDLIM5-208ENST00000504489 SEMA6DQ8NFY4 1073 aa10.1□□□□□ -0.79
PDLIM5-208ENST00000504489 OR14K1Q8NGZ2 314 aa10.1□□□□□ -0.79
PDLIM5-208ENST00000504489 RPS4Y2Q8TD47 263 aa10.1□□□□□ -0.79
PDLIM5-208ENST00000504489 RDH5Q92781 318 aa10.1□□□□□ -0.79
PDLIM5-208ENST00000504489 FAM71F1Q96KD3 344 aaPredicted RBP10.1□□□□□ -0.79
PDLIM5-208ENST00000504489 YTHDF1Q9BYJ9 559 aaKnown RBP10.1□□□□□ -0.79
PDLIM5-208ENST00000504489 SAP30LQ9HAJ7 183 aa10.1□□□□□ -0.79
PDLIM5-208ENST00000504489 BABAM2Q9NXR7 383 aa10.1□□□□□ -0.79
PDLIM5-208ENST00000504489 BLOC1S6Q9UL45 172 aa10.1□□□□□ -0.79
PDLIM5-208ENST00000504489 ERGIC3Q9Y282 383 aa10.1□□□□□ -0.79
PDLIM5-208ENST00000504489 LRRC42Q9Y546 428 aa10.1□□□□□ -0.79
PDLIM5-208ENST00000504489 V9GYS6 101 aa10.1□□□□□ -0.79
PDLIM5-208ENST00000504489 AKAP9Q99996 3911 aa10.1□□□□□ -0.79
PDLIM5-208ENST00000504489 FLNAP21333 2647 aaKnown RBP10.09□□□□□ -0.79
PDLIM5-208ENST00000504489 ZNF816-ZNF321PA0A0X1KG74 233 aa10.09□□□□□ -0.79
PDLIM5-208ENST00000504489 A0A1B0GVI7 797 aa10.09□□□□□ -0.79
PDLIM5-208ENST00000504489 MYL12BO14950 172 aa10.09□□□□□ -0.79
PDLIM5-208ENST00000504489 OGG1O15527 345 aa10.09□□□□□ -0.79
PDLIM5-208ENST00000504489 TPD52L2O43399 206 aaKnown RBP10.09□□□□□ -0.79
PDLIM5-208ENST00000504489 RGS10O43665 173 aa10.09□□□□□ -0.79
PDLIM5-208ENST00000504489 HLA-DPB1P04440 258 aa10.09□□□□□ -0.79
PDLIM5-208ENST00000504489 ZNF12P17014 697 aa10.09□□□□□ -0.79
PDLIM5-208ENST00000504489 TNFRSF1AP19438 455 aa10.09□□□□□ -0.79
PDLIM5-208ENST00000504489 GIFP27352 417 aa10.09□□□□□ -0.79
PDLIM5-208ENST00000504489 CRYBB2P43320 205 aa10.09□□□□□ -0.79
PDLIM5-208ENST00000504489 PDLIM4P50479 330 aa10.09□□□□□ -0.79
PDLIM5-208ENST00000504489 WNT4P56705 351 aa10.09□□□□□ -0.79
PDLIM5-208ENST00000504489 RIPPLY1Q0D2K3 151 aa10.09□□□□□ -0.79
PDLIM5-208ENST00000504489 IRF3Q14653 427 aa10.09□□□□□ -0.79
PDLIM5-208ENST00000504489 OR8G1Q15617 311 aa10.09□□□□□ -0.79
PDLIM5-208ENST00000504489 CLEC12BQ2HXU8 276 aa10.09□□□□□ -0.79
PDLIM5-208ENST00000504489 RPL22L1Q6P5R6 122 aaKnown RBP10.09□□□□□ -0.79
PDLIM5-208ENST00000504489 CLEC2AQ6UVW9 174 aa10.09□□□□□ -0.79
PDLIM5-208ENST00000504489 ZNF525Q8N782 197 aa10.09□□□□□ -0.79
PDLIM5-208ENST00000504489 OR10AD1Q8NGE0 317 aa10.09□□□□□ -0.79
PDLIM5-208ENST00000504489 GATAD2BQ8WXI9 593 aa10.09□□□□□ -0.79
PDLIM5-208ENST00000504489 FAM168AQ92567 244 aa10.09□□□□□ -0.79
PDLIM5-208ENST00000504489 SGCDQ92629 289 aa10.09□□□□□ -0.79
PDLIM5-208ENST00000504489 OR2V2Q96R30 315 aa10.09□□□□□ -0.79
PDLIM5-208ENST00000504489 ADAT1Q9BUB4 502 aaKnown RBP10.09□□□□□ -0.79
PDLIM5-208ENST00000504489 ABCB9Q9NP78 766 aa10.09□□□□□ -0.79
PDLIM5-208ENST00000504489 DLL4Q9NR61 685 aa10.09□□□□□ -0.79
PDLIM5-208ENST00000504489 ERVK-18Q9QC07 812 aa10.09□□□□□ -0.79
PDLIM5-208ENST00000504489 RHBDD3Q9Y3P4 386 aa10.09□□□□□ -0.79
PDLIM5-208ENST00000504489 MPC1Q9Y5U8 109 aa10.09□□□□□ -0.79
PDLIM5-208ENST00000504489 ABCA1O95477 2261 aa10.08□□□□□ -0.8
PDLIM5-208ENST00000504489 IGHV1-69-2A0A0G2JMI3 117 aa10.08□□□□□ -0.8
PDLIM5-208ENST00000504489 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.08□□□□□ -0.8
PDLIM5-208ENST00000504489 TRBV2A0A0J9YWF9 115 aa10.08□□□□□ -0.8
PDLIM5-208ENST00000504489 LOC107986453A0A1B0GWG9 222 aa10.08□□□□□ -0.8
PDLIM5-208ENST00000504489 TMEM212A6NML5 194 aa10.08□□□□□ -0.8
PDLIM5-208ENST00000504489 F5H5P2 479 aa10.08□□□□□ -0.8
PDLIM5-208ENST00000504489 NDUFS8O00217 210 aa10.08□□□□□ -0.8
PDLIM5-208ENST00000504489 SYT7O43581 403 aa10.08□□□□□ -0.8
PDLIM5-208ENST00000504489 RP2O75695 350 aa10.08□□□□□ -0.8
PDLIM5-208ENST00000504489 PTBP3O95758 552 aaKnown RBP10.08□□□□□ -0.8
PDLIM5-208ENST00000504489 LALBAP00709 142 aa10.08□□□□□ -0.8
PDLIM5-208ENST00000504489 ACHEP22303 614 aa10.08□□□□□ -0.8
PDLIM5-208ENST00000504489 COL8A2P25067 703 aa10.08□□□□□ -0.8
PDLIM5-208ENST00000504489 GNALP38405 381 aa10.08□□□□□ -0.8
PDLIM5-208ENST00000504489 CD200P41217 278 aa10.08□□□□□ -0.8
PDLIM5-208ENST00000504489 SRP9P49458 86 aaKnown RBP10.08□□□□□ -0.8
PDLIM5-208ENST00000504489 GTF2A1P52655 376 aaPredicted RBP10.08□□□□□ -0.8
PDLIM5-208ENST00000504489 TAS2R43P59537 309 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms