RNA–Protein interactions for RNA: ENST00000504181.1

LSM6-204, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-204ENST00000504181 OR56B2PQ8NGI1 322 aa9.88□□□□□ -0.83
LSM6-204ENST00000504181 ANGPTL6Q8NI99 470 aa9.88□□□□□ -0.83
LSM6-204ENST00000504181 TMEM239Q8WW34 195 aa9.88□□□□□ -0.83
LSM6-204ENST00000504181 GTF2H4Q92759 462 aa9.88□□□□□ -0.83
LSM6-204ENST00000504181 AKR1E2Q96JD6 320 aa9.88□□□□□ -0.83
LSM6-204ENST00000504181 C20orf27Q9GZN8 174 aa9.88□□□□□ -0.83
LSM6-204ENST00000504181 ZFP57Q9NU63 452 aa9.88□□□□□ -0.83
LSM6-204ENST00000504181 LYVE1Q9Y5Y7 322 aa9.88□□□□□ -0.83
LSM6-204ENST00000504181 TRAV27A0A087WT01 109 aa9.87□□□□□ -0.83
LSM6-204ENST00000504181 SLC16A7O60669 478 aa9.87□□□□□ -0.83
LSM6-204ENST00000504181 CASQ1P31415 396 aa9.87□□□□□ -0.83
LSM6-204ENST00000504181 RBM34P42696 430 aaKnown RBP9.87□□□□□ -0.83
LSM6-204ENST00000504181 OR3A4PP47883 348 aa9.87□□□□□ -0.83
LSM6-204ENST00000504181 ENTPD1P49961 510 aa9.87□□□□□ -0.83
LSM6-204ENST00000504181 RPL14P50914 215 aaKnown RBP9.87□□□□□ -0.83
LSM6-204ENST00000504181 CAPZA1P52907 286 aa9.87□□□□□ -0.83
LSM6-204ENST00000504181 MXRA7P84157 204 aa9.87□□□□□ -0.83
LSM6-204ENST00000504181 TRAP1Q12931 704 aaKnown RBP9.87□□□□□ -0.83
LSM6-204ENST00000504181 SNAI3Q3KNW1 292 aa9.87□□□□□ -0.83
LSM6-204ENST00000504181 KRTAP27-1Q3LI81 207 aa9.87□□□□□ -0.83
LSM6-204ENST00000504181 MSANTD1Q6ZTZ1 278 aa9.87□□□□□ -0.83
LSM6-204ENST00000504181 DHDDSQ86SQ9 333 aa9.87□□□□□ -0.83
LSM6-204ENST00000504181 EGFL6Q8IUX8 553 aa9.87□□□□□ -0.83
LSM6-204ENST00000504181 GLB1L2Q8IW92 636 aa9.87□□□□□ -0.83
LSM6-204ENST00000504181 CDRT15Q96T59 188 aa9.87□□□□□ -0.83
LSM6-204ENST00000504181 SLC25A33Q9BSK2 321 aa9.87□□□□□ -0.83
LSM6-204ENST00000504181 LIN7BQ9HAP6 207 aa9.87□□□□□ -0.83
LSM6-204ENST00000504181 SLC25A37Q9NYZ2 338 aa9.87□□□□□ -0.83
LSM6-204ENST00000504181 RAP2CQ9Y3L5 183 aa9.87□□□□□ -0.83
LSM6-204ENST00000504181 ADAM18Q9Y3Q7 739 aa9.87□□□□□ -0.83
LSM6-204ENST00000504181 hCG_1809904A0A1W2PP81 198 aa9.86□□□□□ -0.83
LSM6-204ENST00000504181 A0A1W2PPE2 198 aa9.86□□□□□ -0.83
LSM6-204ENST00000504181 A0A1W2PPH5 198 aa9.86□□□□□ -0.83
LSM6-204ENST00000504181 A0A1W2PR64 198 aa9.86□□□□□ -0.83
LSM6-204ENST00000504181 A0A1W2PRV1 198 aa9.86□□□□□ -0.83
LSM6-204ENST00000504181 TRIM64CA6NLI5 447 aa9.86□□□□□ -0.83
LSM6-204ENST00000504181 FAM90A22PA8MWA6 464 aa9.86□□□□□ -0.83
LSM6-204ENST00000504181 SDHDO14521 159 aa9.86□□□□□ -0.83
LSM6-204ENST00000504181 XKRYO14609 159 aa9.86□□□□□ -0.83
LSM6-204ENST00000504181 IMPA2O14732 288 aa9.86□□□□□ -0.83
LSM6-204ENST00000504181 AKR7A2O43488 359 aa9.86□□□□□ -0.83
LSM6-204ENST00000504181 KHDRBS3O75525 346 aaKnown RBP9.86□□□□□ -0.83
LSM6-204ENST00000504181 PGA5P0DJD9 388 aa9.86□□□□□ -0.83
LSM6-204ENST00000504181 ABCE1P61221 599 aaKnown RBP9.86□□□□□ -0.83
LSM6-204ENST00000504181 SPIBQ01892 262 aa9.86□□□□□ -0.83
LSM6-204ENST00000504181 CKAP4Q07065 602 aaKnown RBP9.86□□□□□ -0.83
LSM6-204ENST00000504181 DYNC1I2Q13409 638 aaKnown RBP9.86□□□□□ -0.83
LSM6-204ENST00000504181 SEC23BQ15437 767 aa9.86□□□□□ -0.83
LSM6-204ENST00000504181 GLYATL3Q5SZD4 288 aa9.86□□□□□ -0.83
LSM6-204ENST00000504181 ZNF626Q68DY1 528 aa9.86□□□□□ -0.83
LSM6-204ENST00000504181 TMEM200BQ69YZ2 307 aa9.86□□□□□ -0.83
LSM6-204ENST00000504181 PLBD1Q6P4A8 553 aa9.86□□□□□ -0.83
LSM6-204ENST00000504181 CFAP77Q6ZQR2 320 aa9.86□□□□□ -0.83
LSM6-204ENST00000504181 CPLX4Q7Z7G2 160 aa9.86□□□□□ -0.83
LSM6-204ENST00000504181 MSRB3Q8IXL7 192 aa9.86□□□□□ -0.83
LSM6-204ENST00000504181 OR9I1Q8NGQ6 314 aa9.86□□□□□ -0.83
LSM6-204ENST00000504181 OR4Q3Q8NH05 313 aa9.86□□□□□ -0.83
LSM6-204ENST00000504181 OR51A7Q8NH64 312 aa9.86□□□□□ -0.83
LSM6-204ENST00000504181 RNFT2Q96EX2 444 aa9.86□□□□□ -0.83
LSM6-204ENST00000504181 PKNOX2Q96KN3 472 aa9.86□□□□□ -0.83
LSM6-204ENST00000504181 Q96M85 177 aa9.86□□□□□ -0.83
LSM6-204ENST00000504181 NOL4LQ96MY1 436 aaPredicted RBP9.86□□□□□ -0.83
LSM6-204ENST00000504181 PITX2Q99697 317 aa9.86□□□□□ -0.83
LSM6-204ENST00000504181 TMEM38AQ9H6F2 299 aa9.86□□□□□ -0.83
LSM6-204ENST00000504181 USE1Q9NZ43 259 aa9.86□□□□□ -0.83
LSM6-204ENST00000504181 GRHPRQ9UBQ7 328 aa9.86□□□□□ -0.83
LSM6-204ENST00000504181 MED31Q9Y3C7 131 aa9.86□□□□□ -0.83
LSM6-204ENST00000504181 PRSS37A4D1T9 235 aa9.85□□□□□ -0.83
LSM6-204ENST00000504181 OR2AT4A6NND4 320 aa9.85□□□□□ -0.83
LSM6-204ENST00000504181 AMY1AP04745 511 aa9.85□□□□□ -0.83
LSM6-204ENST00000504181 AMY2AP04746 511 aa9.85□□□□□ -0.83
LSM6-204ENST00000504181 CENPAP49450 140 aa9.85□□□□□ -0.83
LSM6-204ENST00000504181 POLR2JP52435 117 aaKnown RBP9.85□□□□□ -0.83
LSM6-204ENST00000504181 RPL31P62899 125 aaKnown RBP9.85□□□□□ -0.83
LSM6-204ENST00000504181 FAM27D1Q5T7N8 215 aa9.85□□□□□ -0.83
LSM6-204ENST00000504181 LCNL1Q6ZST4 164 aa9.85□□□□□ -0.83
LSM6-204ENST00000504181 TSEN54Q7Z6J9 526 aaKnown RBP9.85□□□□□ -0.83
LSM6-204ENST00000504181 LINC00346Q8IVM7 164 aa9.85□□□□□ -0.83
LSM6-204ENST00000504181 RPP25LQ8N5L8 163 aaKnown RBP9.85□□□□□ -0.83
LSM6-204ENST00000504181 DPP10Q8N608 796 aa9.85□□□□□ -0.83
LSM6-204ENST00000504181 OR4M1Q8NGD0 313 aa9.85□□□□□ -0.83
LSM6-204ENST00000504181 IL17DQ8TAD2 202 aa9.85□□□□□ -0.83
LSM6-204ENST00000504181 ZNF570Q96NI8 536 aa9.85□□□□□ -0.83
LSM6-204ENST00000504181 SORT1Q99523 831 aa9.85□□□□□ -0.83
LSM6-204ENST00000504181 ATF6BQ99941 703 aa9.85□□□□□ -0.83
LSM6-204ENST00000504181 SYT4Q9H2B2 425 aa9.85□□□□□ -0.83
LSM6-204ENST00000504181 WDR55Q9H6Y2 383 aaPredicted RBP9.85□□□□□ -0.83
LSM6-204ENST00000504181 PPP1R3EQ9H7J1 279 aa9.85□□□□□ -0.83
LSM6-204ENST00000504181 NLKQ9UBE8 527 aa9.85□□□□□ -0.83
LSM6-204ENST00000504181 LRP12Q9Y561 859 aa9.85□□□□□ -0.83
LSM6-204ENST00000504181 IGKV1D-17A0A075B6S4 117 aa9.84□□□□□ -0.83
LSM6-204ENST00000504181 ANKRD30BLA7E2S9 258 aa9.84□□□□□ -0.83
LSM6-204ENST00000504181 M0QX08 132 aa9.84□□□□□ -0.83
LSM6-204ENST00000504181 TIPRLO75663 272 aa9.84□□□□□ -0.83
LSM6-204ENST00000504181 IFI30P13284 250 aa9.84□□□□□ -0.83
LSM6-204ENST00000504181 TPTEP56180 551 aa9.84□□□□□ -0.83
LSM6-204ENST00000504181 TAS2R41P59536 307 aa9.84□□□□□ -0.83
LSM6-204ENST00000504181 PRR20EP86478 221 aa9.84□□□□□ -0.83
LSM6-204ENST00000504181 PRR20CP86479 221 aa9.84□□□□□ -0.83
LSM6-204ENST00000504181 PRR20DP86480 221 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms