RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 FAM234AQ9H0X4 552 aa5.01□□□□□ -1.61
LSM3P4-201ENST00000502948 NIPAL2Q9H841 368 aa5.01□□□□□ -1.61
LSM3P4-201ENST00000502948 TCF7L1Q9HCS4 588 aa5.01□□□□□ -1.61
LSM3P4-201ENST00000502948 RAB18Q9NP72 206 aa5.01□□□□□ -1.61
LSM3P4-201ENST00000502948 HAO2Q9NYQ3 351 aa5.01□□□□□ -1.61
LSM3P4-201ENST00000502948 GMPR2Q9P2T1 348 aaKnown RBP5.01□□□□□ -1.61
LSM3P4-201ENST00000502948 FAM96BQ9Y3D0 163 aa5.01□□□□□ -1.61
LSM3P4-201ENST00000502948 MAB21L2Q9Y586 359 aa5.01□□□□□ -1.61
LSM3P4-201ENST00000502948 NOTCH1P46531 2555 aa5□□□□□ -1.61
LSM3P4-201ENST00000502948 ARRDC5A6NEK1 342 aa5□□□□□ -1.61
LSM3P4-201ENST00000502948 ACOD1A6NK06 481 aa5□□□□□ -1.61
LSM3P4-201ENST00000502948 ANXA2P2A6NMY6 339 aa5□□□□□ -1.61
LSM3P4-201ENST00000502948 ZNF593O00488 134 aaPredicted RBP5□□□□□ -1.61
LSM3P4-201ENST00000502948 NPFFO15130 113 aa5□□□□□ -1.61
LSM3P4-201ENST00000502948 GYPAP02724 150 aa5□□□□□ -1.61
LSM3P4-201ENST00000502948 OPN1MWP04001 364 aa5□□□□□ -1.61
LSM3P4-201ENST00000502948 GRPP07492 148 aa5□□□□□ -1.61
LSM3P4-201ENST00000502948 ACAA1P09110 424 aaPredicted RBP5□□□□□ -1.61
LSM3P4-201ENST00000502948 OPN1MW2P0DN77 364 aa5□□□□□ -1.61
LSM3P4-201ENST00000502948 OPN1MW3P0DN78 364 aa5□□□□□ -1.61
LSM3P4-201ENST00000502948 NCK1P16333 377 aa5□□□□□ -1.61
LSM3P4-201ENST00000502948 HOXB6P17509 224 aaKnown RBP5□□□□□ -1.61
LSM3P4-201ENST00000502948 AMY2BP19961 511 aa5□□□□□ -1.61
LSM3P4-201ENST00000502948 RRM2P31350 389 aa5□□□□□ -1.61
LSM3P4-201ENST00000502948 DCTDP32321 178 aa5□□□□□ -1.61
LSM3P4-201ENST00000502948 HERPUD1Q15011 391 aa5□□□□□ -1.61
LSM3P4-201ENST00000502948 BEAN1Q3B7T3 259 aa5□□□□□ -1.61
LSM3P4-201ENST00000502948 WDR38Q5JTN6 314 aa5□□□□□ -1.61
LSM3P4-201ENST00000502948 SAMD4BQ5PRF9 694 aaKnown RBP5□□□□□ -1.61
LSM3P4-201ENST00000502948 ZBTB37Q5TC79 503 aa5□□□□□ -1.61
LSM3P4-201ENST00000502948 LINC01590Q5TEZ4 76 aa5□□□□□ -1.61
LSM3P4-201ENST00000502948 SAMD5Q5TGI4 173 aa5□□□□□ -1.61
LSM3P4-201ENST00000502948 LCN1P1Q5VSP4 162 aa5□□□□□ -1.61
LSM3P4-201ENST00000502948 SLC35E4Q6ICL7 350 aa5□□□□□ -1.61
LSM3P4-201ENST00000502948 CRIP3Q6Q6R5 217 aa5□□□□□ -1.61
LSM3P4-201ENST00000502948 ZNF826PQ6ZT77 177 aa5□□□□□ -1.61
LSM3P4-201ENST00000502948 SHFQ7M4L6 423 aa5□□□□□ -1.61
LSM3P4-201ENST00000502948 DPY19L4Q7Z388 723 aa5□□□□□ -1.61
LSM3P4-201ENST00000502948 WDR86Q86TI4 376 aa5□□□□□ -1.61
LSM3P4-201ENST00000502948 CALHM1Q8IU99 346 aa5□□□□□ -1.61
LSM3P4-201ENST00000502948 PGAM4Q8N0Y7 254 aa5□□□□□ -1.61
LSM3P4-201ENST00000502948 ZNF454Q8N9F8 522 aa5□□□□□ -1.61
LSM3P4-201ENST00000502948 SLC37A3Q8NCC5 494 aa5□□□□□ -1.61
LSM3P4-201ENST00000502948 C19orf18Q8NEA5 215 aa5□□□□□ -1.61
LSM3P4-201ENST00000502948 OR2T33Q8NG76 320 aa5□□□□□ -1.61
LSM3P4-201ENST00000502948 OR5D13Q8NGL4 314 aa5□□□□□ -1.61
LSM3P4-201ENST00000502948 ANGPTL6Q8NI99 470 aa5□□□□□ -1.61
LSM3P4-201ENST00000502948 LRRC29Q8WV35 223 aa5□□□□□ -1.61
LSM3P4-201ENST00000502948 ZNRF4Q8WWF5 429 aa5□□□□□ -1.61
LSM3P4-201ENST00000502948 TAF15Q92804 592 aaKnown RBP eCLIP5□□□□□ -1.61
LSM3P4-201ENST00000502948 REEP6Q96HR9 211 aa5□□□□□ -1.61
LSM3P4-201ENST00000502948 AJUBAQ96IF1 538 aa5□□□□□ -1.61
LSM3P4-201ENST00000502948 NSMCE2Q96MF7 247 aa5□□□□□ -1.61
LSM3P4-201ENST00000502948 PKP2Q99959 881 aa5□□□□□ -1.61
LSM3P4-201ENST00000502948 MICU1Q9BPX6 476 aa5□□□□□ -1.61
LSM3P4-201ENST00000502948 COPS4Q9BT78 406 aa5□□□□□ -1.61
LSM3P4-201ENST00000502948 DGCR6LQ9BY27 220 aa5□□□□□ -1.61
LSM3P4-201ENST00000502948 MAGIXQ9H6Y5 334 aa5□□□□□ -1.61
LSM3P4-201ENST00000502948 CMC2Q9NRP2 79 aa5□□□□□ -1.61
LSM3P4-201ENST00000502948 NDE1Q9NXR1 346 aa5□□□□□ -1.61
LSM3P4-201ENST00000502948 RASL12Q9NYN1 266 aa5□□□□□ -1.61
LSM3P4-201ENST00000502948 SF3B6Q9Y3B4 125 aaKnown RBP5□□□□□ -1.61
LSM3P4-201ENST00000502948 LYVE1Q9Y5Y7 322 aa5□□□□□ -1.61
LSM3P4-201ENST00000502948 DSCAML1Q8TD84 2053 aa5□□□□□ -1.61
LSM3P4-201ENST00000502948 IGHV3-64DA0A0J9YX35 117 aa4.99□□□□□ -1.61
LSM3P4-201ENST00000502948 ZNF816-ZNF321PA0A0X1KG74 233 aa4.99□□□□□ -1.61
LSM3P4-201ENST00000502948 A0A1W2PPH5 198 aa4.99□□□□□ -1.61
LSM3P4-201ENST00000502948 hCG_1807616A0A1W2PRN6 198 aa4.99□□□□□ -1.61
LSM3P4-201ENST00000502948 DHRS12A0PJE2 317 aa4.99□□□□□ -1.61
LSM3P4-201ENST00000502948 NKX6-3A6NJ46 265 aa4.99□□□□□ -1.61
LSM3P4-201ENST00000502948 A6NLC8 198 aa4.99□□□□□ -1.61
LSM3P4-201ENST00000502948 VGLL3A8MV65 326 aa4.99□□□□□ -1.61
LSM3P4-201ENST00000502948 ACOT8O14734 319 aa4.99□□□□□ -1.61
LSM3P4-201ENST00000502948 CDIPTO14735 213 aa4.99□□□□□ -1.61
LSM3P4-201ENST00000502948 SIGLEC5O15389 551 aa4.99□□□□□ -1.61
LSM3P4-201ENST00000502948 E2F6O75461 281 aa4.99□□□□□ -1.61
LSM3P4-201ENST00000502948 DIRAS1O95057 198 aa4.99□□□□□ -1.61
LSM3P4-201ENST00000502948 IFNGP01579 166 aa4.99□□□□□ -1.61
LSM3P4-201ENST00000502948 CSF1P09603 554 aa4.99□□□□□ -1.61
LSM3P4-201ENST00000502948 PSKH1P11801 424 aa4.99□□□□□ -1.61
LSM3P4-201ENST00000502948 ATP6V1B1P15313 513 aa4.99□□□□□ -1.61
LSM3P4-201ENST00000502948 SPI1P17947 270 aa4.99□□□□□ -1.61
LSM3P4-201ENST00000502948 PAICSP22234 425 aaKnown RBP4.99□□□□□ -1.61
LSM3P4-201ENST00000502948 ANOS1P23352 680 aa4.99□□□□□ -1.61
LSM3P4-201ENST00000502948 GNALP38405 381 aa4.99□□□□□ -1.61
LSM3P4-201ENST00000502948 OPRL1P41146 370 aa4.99□□□□□ -1.61
LSM3P4-201ENST00000502948 CX3CR1P49238 355 aa4.99□□□□□ -1.61
LSM3P4-201ENST00000502948 GSK3AP49840 483 aa4.99□□□□□ -1.61
LSM3P4-201ENST00000502948 EFNB2P52799 333 aa4.99□□□□□ -1.61
LSM3P4-201ENST00000502948 BLMHQ13867 455 aa4.99□□□□□ -1.61
LSM3P4-201ENST00000502948 TAF13Q15543 124 aa4.99□□□□□ -1.61
LSM3P4-201ENST00000502948 TIGD6Q17RP2 521 aa4.99□□□□□ -1.61
LSM3P4-201ENST00000502948 KLHL12Q53G59 568 aa4.99□□□□□ -1.61
LSM3P4-201ENST00000502948 DEGS2Q6QHC5 323 aa4.99□□□□□ -1.61
LSM3P4-201ENST00000502948 Q6ZTK2 550 aa4.99□□□□□ -1.61
LSM3P4-201ENST00000502948 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.99□□□□□ -1.61
LSM3P4-201ENST00000502948 ARHGAP24Q8N264 748 aa4.99□□□□□ -1.61
LSM3P4-201ENST00000502948 Q8N2B8 174 aa4.99□□□□□ -1.61
LSM3P4-201ENST00000502948 OR9Q1Q8NGQ5 310 aa4.99□□□□□ -1.61
LSM3P4-201ENST00000502948 OR5K1Q8NHB7 308 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms