RNA–Protein interactions for RNA: ENST00000502717.5

HMGXB3-201, Transcript of HMG-box containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGXB3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-201ENST00000502717 TIMM8BQ9Y5J9 83 aaPredicted RBP15.47■□□□□ 0.07
HMGXB3-201ENST00000502717 TRBV11-1A0A0K0K1C0 115 aa15.46■□□□□ 0.07
HMGXB3-201ENST00000502717 CLDN1O95832 211 aa15.46■□□□□ 0.07
HMGXB3-201ENST00000502717 IRF2P14316 349 aa15.46■□□□□ 0.07
HMGXB3-201ENST00000502717 C9orf50Q5SZB4 431 aa15.46■□□□□ 0.07
HMGXB3-201ENST00000502717 BRICD5Q6PL45 260 aa15.46■□□□□ 0.07
HMGXB3-201ENST00000502717 NPEPL1Q8NDH3 523 aa15.46■□□□□ 0.07
HMGXB3-201ENST00000502717 NANOS1Q8WY41 292 aaKnown RBP15.46■□□□□ 0.07
HMGXB3-201ENST00000502717 NTNG2Q96CW9 530 aa15.46■□□□□ 0.07
HMGXB3-201ENST00000502717 C6orf106Q9H6K1 298 aaPredicted RBP15.46■□□□□ 0.07
HMGXB3-201ENST00000502717 FBXO34Q9NWN3 711 aa15.46■□□□□ 0.07
HMGXB3-201ENST00000502717 WSB1Q9Y6I7 421 aa15.46■□□□□ 0.07
HMGXB3-201ENST00000502717 hCG_1809904A0A1W2PP81 198 aa15.46■□□□□ 0.07
HMGXB3-201ENST00000502717 A0A1W2PR64 198 aa15.46■□□□□ 0.07
HMGXB3-201ENST00000502717 A0A1W2PRV1 198 aa15.46■□□□□ 0.07
HMGXB3-201ENST00000502717 HYAL3O43820 417 aaPredicted RBP15.46■□□□□ 0.07
HMGXB3-201ENST00000502717 OR2A4O95047 310 aa15.46■□□□□ 0.07
HMGXB3-201ENST00000502717 CEACAM5P06731 702 aa15.46■□□□□ 0.07
HMGXB3-201ENST00000502717 ISXQ2M1V0 245 aa15.46■□□□□ 0.07
HMGXB3-201ENST00000502717 ZNF787Q6DD87 383 aa15.46■□□□□ 0.07
HMGXB3-201ENST00000502717 UBE3DQ7Z6J8 389 aa15.46■□□□□ 0.07
HMGXB3-201ENST00000502717 SEMA6DQ8NFY4 1073 aa15.46■□□□□ 0.07
HMGXB3-201ENST00000502717 UHRF2Q96PU4 802 aa15.46■□□□□ 0.07
HMGXB3-201ENST00000502717 OR2A7Q96R45 310 aa15.46■□□□□ 0.07
HMGXB3-201ENST00000502717 SERTAD4Q9NUC0 356 aa15.46■□□□□ 0.07
HMGXB3-201ENST00000502717 KIR2DS1A0A191URI9 304 aa15.46■□□□□ 0.07
HMGXB3-201ENST00000502717 HIST1H1DP16402 221 aaKnown RBP15.46■□□□□ 0.07
HMGXB3-201ENST00000502717 KIR2DS4P43632 304 aa15.46■□□□□ 0.07
HMGXB3-201ENST00000502717 KIR2DS1Q14954 304 aa15.46■□□□□ 0.07
HMGXB3-201ENST00000502717 CHST6Q9GZX3 395 aa15.46■□□□□ 0.07
HMGXB3-201ENST00000502717 PLEKHF2Q9H8W4 249 aa15.46■□□□□ 0.07
HMGXB3-201ENST00000502717 A6NLC8 198 aa15.46■□□□□ 0.06
HMGXB3-201ENST00000502717 CLDN34H7C241 214 aa15.46■□□□□ 0.06
HMGXB3-201ENST00000502717 BAXQ07812 192 aa15.46■□□□□ 0.06
HMGXB3-201ENST00000502717 ECH1Q13011 328 aa15.46■□□□□ 0.06
HMGXB3-201ENST00000502717 IKZF1Q13422 519 aa15.46■□□□□ 0.06
HMGXB3-201ENST00000502717 ENDOGQ14249 297 aaKnown RBP15.46■□□□□ 0.06
HMGXB3-201ENST00000502717 GGNBP1Q5YKI7 109 aa15.46■□□□□ 0.06
HMGXB3-201ENST00000502717 TSEN54Q7Z6J9 526 aaKnown RBP15.46■□□□□ 0.06
HMGXB3-201ENST00000502717 ISOC2Q96AB3 205 aa15.46■□□□□ 0.06
HMGXB3-201ENST00000502717 KTI12Q96EK9 354 aaPredicted RBP15.46■□□□□ 0.06
HMGXB3-201ENST00000502717 SMIM7Q9BQ49 75 aa15.46■□□□□ 0.06
HMGXB3-201ENST00000502717 GCM1Q9NP62 436 aa15.46■□□□□ 0.06
HMGXB3-201ENST00000502717 CCDC187A0A096LP49 1063 aa15.45■□□□□ 0.06
HMGXB3-201ENST00000502717 OR4C45A6NMZ5 311 aa15.45■□□□□ 0.06
HMGXB3-201ENST00000502717 SSSCA1O60232 199 aa15.45■□□□□ 0.06
HMGXB3-201ENST00000502717 CCR2P41597 374 aa15.45■□□□□ 0.06
HMGXB3-201ENST00000502717 Q3ZCU0 254 aa15.45■□□□□ 0.06
HMGXB3-201ENST00000502717 DEGS2Q6QHC5 323 aa15.45■□□□□ 0.06
HMGXB3-201ENST00000502717 CMBLQ96DG6 245 aa15.45■□□□□ 0.06
HMGXB3-201ENST00000502717 MSX1P28360 303 aa15.45■□□□□ 0.06
HMGXB3-201ENST00000502717 CD1CP29017 333 aa15.45■□□□□ 0.06
HMGXB3-201ENST00000502717 TXN2Q99757 166 aa15.45■□□□□ 0.06
HMGXB3-201ENST00000502717 NRIP2Q9BQI9 281 aa15.45■□□□□ 0.06
HMGXB3-201ENST00000502717 OR51I2Q9H344 312 aa15.45■□□□□ 0.06
HMGXB3-201ENST00000502717 NPDC1Q9NQX5 325 aaPredicted RBP15.45■□□□□ 0.06
HMGXB3-201ENST00000502717 CTXN2P0C2S0 81 aa15.45■□□□□ 0.06
HMGXB3-201ENST00000502717 MMP17Q9ULZ9 603 aa15.45■□□□□ 0.06
HMGXB3-201ENST00000502717 RCL1Q9Y2P8 373 aaKnown RBP15.45■□□□□ 0.06
HMGXB3-201ENST00000502717 A8MXK9 166 aa15.45■□□□□ 0.06
HMGXB3-201ENST00000502717 RBP2P50120 134 aa15.45■□□□□ 0.06
HMGXB3-201ENST00000502717 CATR1Q13166 79 aa15.45■□□□□ 0.06
HMGXB3-201ENST00000502717 HINT2Q9BX68 163 aa15.45■□□□□ 0.06
HMGXB3-201ENST00000502717 SH3BGRL2Q9UJC5 107 aa15.45■□□□□ 0.06
HMGXB3-201ENST00000502717 ARG1P05089 322 aa15.44■□□□□ 0.06
HMGXB3-201ENST00000502717 OPRM1P35372 400 aa15.44■□□□□ 0.06
HMGXB3-201ENST00000502717 PPP2CBP62714 309 aa15.44■□□□□ 0.06
HMGXB3-201ENST00000502717 PPP2CAP67775 309 aa15.44■□□□□ 0.06
HMGXB3-201ENST00000502717 NCR3LG1Q68D85 454 aa15.44■□□□□ 0.06
HMGXB3-201ENST00000502717 ADAT1Q9BUB4 502 aaKnown RBP15.44■□□□□ 0.06
HMGXB3-201ENST00000502717 ARV1Q9H2C2 271 aa15.44■□□□□ 0.06
HMGXB3-201ENST00000502717 PARP11Q9NR21 331 aa15.44■□□□□ 0.06
HMGXB3-201ENST00000502717 ZNF230Q9UIE0 474 aaPredicted RBP15.44■□□□□ 0.06
HMGXB3-201ENST00000502717 CD81P60033 236 aa15.44■□□□□ 0.06
HMGXB3-201ENST00000502717 TGFBR3Q03167 851 aa15.44■□□□□ 0.06
HMGXB3-201ENST00000502717 THNSL2Q86YJ6 484 aa15.44■□□□□ 0.06
HMGXB3-201ENST00000502717 LHX4Q969G2 390 aa15.44■□□□□ 0.06
HMGXB3-201ENST00000502717 PGLYRP3Q96LB9 341 aa15.44■□□□□ 0.06
HMGXB3-201ENST00000502717 ICOSLGO75144 302 aa15.44■□□□□ 0.06
HMGXB3-201ENST00000502717 ADAP1O75689 374 aa15.44■□□□□ 0.06
HMGXB3-201ENST00000502717 HLA-DOBP13765 273 aa15.44■□□□□ 0.06
HMGXB3-201ENST00000502717 EIF1P41567 113 aaKnown RBP15.44■□□□□ 0.06
HMGXB3-201ENST00000502717 TMEM33P57088 247 aa15.44■□□□□ 0.06
HMGXB3-201ENST00000502717 LILRA6Q6PI73 481 aa15.44■□□□□ 0.06
HMGXB3-201ENST00000502717 SLC16A14Q7RTX9 510 aa15.44■□□□□ 0.06
HMGXB3-201ENST00000502717 MCTS1Q9ULC4 181 aaKnown RBP15.44■□□□□ 0.06
HMGXB3-201ENST00000502717 PQLC2LA1A4F0 135 aa15.44■□□□□ 0.06
HMGXB3-201ENST00000502717 NXPH3O95157 252 aa15.44■□□□□ 0.06
HMGXB3-201ENST00000502717 GLRA1P23415 457 aa15.44■□□□□ 0.06
HMGXB3-201ENST00000502717 DHODHQ02127 395 aa15.44■□□□□ 0.06
HMGXB3-201ENST00000502717 PRICKLE4Q2TBC4 344 aa15.44■□□□□ 0.06
HMGXB3-201ENST00000502717 FAM199XQ6PEV8 388 aaPredicted RBP15.44■□□□□ 0.06
HMGXB3-201ENST00000502717 CDC20BQ86Y33 519 aa15.44■□□□□ 0.06
HMGXB3-201ENST00000502717 RPS4Y2Q8TD47 263 aa15.44■□□□□ 0.06
HMGXB3-201ENST00000502717 PRO1933Q9H354 126 aa15.44■□□□□ 0.06
HMGXB3-201ENST00000502717 LAMP3Q9UQV4 416 aa15.44■□□□□ 0.06
HMGXB3-201ENST00000502717 A0A087X0M5 115 aa15.43■□□□□ 0.06
HMGXB3-201ENST00000502717 A0A1B0GX30 115 aa15.43■□□□□ 0.06
HMGXB3-201ENST00000502717 EIF1BO60739 113 aaKnown RBP15.43■□□□□ 0.06
HMGXB3-201ENST00000502717 ELLP55199 621 aaPredicted RBP15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms