RNA–Protein interactions for RNA: ENST00000498808.5

HDAC6-236, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-236ENST00000498808 RPS6KA3P51812 740 aa12.6□□□□□ -0.39
HDAC6-236ENST00000498808 CAV3P56539 151 aa12.6□□□□□ -0.39
HDAC6-236ENST00000498808 MXRA7P84157 204 aa12.6□□□□□ -0.39
HDAC6-236ENST00000498808 CYLC2Q14093 348 aaPredicted RBP12.6□□□□□ -0.39
HDAC6-236ENST00000498808 CNN3Q15417 329 aaKnown RBP12.6□□□□□ -0.39
HDAC6-236ENST00000498808 TMEM95Q3KNT9 176 aa12.6□□□□□ -0.39
HDAC6-236ENST00000498808 SLC36A3Q495N2 470 aa12.6□□□□□ -0.39
HDAC6-236ENST00000498808 DPY19L2P2Q6ZN68 376 aa12.6□□□□□ -0.39
HDAC6-236ENST00000498808 OR8J3Q8NGG0 315 aa12.6□□□□□ -0.39
HDAC6-236ENST00000498808 TLCD1Q96CP7 247 aa12.6□□□□□ -0.39
HDAC6-236ENST00000498808 RSRC1Q96IZ7 334 aaKnown RBP12.6□□□□□ -0.39
HDAC6-236ENST00000498808 NMNAT3Q96T66 252 aa12.6□□□□□ -0.39
HDAC6-236ENST00000498808 SH3GL1Q99961 368 aa12.6□□□□□ -0.39
HDAC6-236ENST00000498808 MRPL22Q9NWU5 206 aaKnown RBP12.6□□□□□ -0.39
HDAC6-236ENST00000498808 TCF19Q9Y242 345 aa12.6□□□□□ -0.39
HDAC6-236ENST00000498808 TMEM5Q9Y2B1 443 aa12.6□□□□□ -0.39
HDAC6-236ENST00000498808 NKX6-3A6NJ46 265 aa12.59□□□□□ -0.39
HDAC6-236ENST00000498808 SIGLEC5O15389 551 aa12.59□□□□□ -0.39
HDAC6-236ENST00000498808 PEX14O75381 377 aa12.59□□□□□ -0.39
HDAC6-236ENST00000498808 PF4P02776 101 aa12.59□□□□□ -0.39
HDAC6-236ENST00000498808 SLC2A1P11166 492 aa12.59□□□□□ -0.39
HDAC6-236ENST00000498808 POU1F1P28069 291 aa12.59□□□□□ -0.39
HDAC6-236ENST00000498808 RPS27P42677 84 aaKnown RBP12.59□□□□□ -0.39
HDAC6-236ENST00000498808 RAB13P51153 203 aa12.59□□□□□ -0.39
HDAC6-236ENST00000498808 DRAM2Q6UX65 266 aa12.59□□□□□ -0.39
HDAC6-236ENST00000498808 ZBTB46Q86UZ6 589 aa12.59□□□□□ -0.39
HDAC6-236ENST00000498808 TMEM219Q86XT9 240 aa12.59□□□□□ -0.39
HDAC6-236ENST00000498808 MKXQ8IYA7 352 aa12.59□□□□□ -0.39
HDAC6-236ENST00000498808 DYNAPQ8N1N2 210 aa12.59□□□□□ -0.39
HDAC6-236ENST00000498808 ANGPTL6Q8NI99 470 aa12.59□□□□□ -0.39
HDAC6-236ENST00000498808 RAB3IPQ96QF0 476 aaPredicted RBP12.59□□□□□ -0.39
HDAC6-236ENST00000498808 PARD6BQ9BYG5 372 aa12.59□□□□□ -0.39
HDAC6-236ENST00000498808 TLNRD1Q9H1K6 362 aa12.59□□□□□ -0.39
HDAC6-236ENST00000498808 RPRD1BQ9NQG5 326 aaKnown RBP12.59□□□□□ -0.39
HDAC6-236ENST00000498808 INPP5EQ9NRR6 644 aa12.59□□□□□ -0.39
HDAC6-236ENST00000498808 A6NDX4 124 aa12.58□□□□□ -0.4
HDAC6-236ENST00000498808 ANKRD30BLA7E2S9 258 aa12.58□□□□□ -0.4
HDAC6-236ENST00000498808 VGLL3A8MV65 326 aa12.58□□□□□ -0.4
HDAC6-236ENST00000498808 FAM220BPB1ANY3 271 aa12.58□□□□□ -0.4
HDAC6-236ENST00000498808 DUS4LO95620 317 aaKnown RBP12.58□□□□□ -0.4
HDAC6-236ENST00000498808 TROVE2P10155 538 aaKnown RBP eCLIP12.58□□□□□ -0.4
HDAC6-236ENST00000498808 PSKH1P11801 424 aa12.58□□□□□ -0.4
HDAC6-236ENST00000498808 DDOSTP39656 456 aa12.58□□□□□ -0.4
HDAC6-236ENST00000498808 OMPP47874 163 aa12.58□□□□□ -0.4
HDAC6-236ENST00000498808 PLA1AQ53H76 456 aa12.58□□□□□ -0.4
HDAC6-236ENST00000498808 TCTEX1D4Q5JR98 221 aa12.58□□□□□ -0.4
HDAC6-236ENST00000498808 RRM2BQ7LG56 351 aa12.58□□□□□ -0.4
HDAC6-236ENST00000498808 LHFPL4Q7Z7J7 247 aa12.58□□□□□ -0.4
HDAC6-236ENST00000498808 SPSB4Q96A44 273 aa12.58□□□□□ -0.4
HDAC6-236ENST00000498808 MED30Q96HR3 178 aa12.58□□□□□ -0.4
HDAC6-236ENST00000498808 ERMAPQ96PL5 475 aaPredicted RBP12.58□□□□□ -0.4
HDAC6-236ENST00000498808 PRSS22Q9GZN4 317 aa12.58□□□□□ -0.4
HDAC6-236ENST00000498808 MUC13Q9H3R2 512 aa12.58□□□□□ -0.4
HDAC6-236ENST00000498808 FN3KQ9H479 309 aa12.58□□□□□ -0.4
HDAC6-236ENST00000498808 OPA3Q9H6K4 179 aa12.58□□□□□ -0.4
HDAC6-236ENST00000498808 U3KQK5 164 aa12.58□□□□□ -0.4
HDAC6-236ENST00000498808 STAB2Q8WWQ8 2551 aa12.57□□□□□ -0.4
HDAC6-236ENST00000498808 TRBV23-1A0A0A0MS06 115 aa12.57□□□□□ -0.4
HDAC6-236ENST00000498808 C3orf84H3BNL1 204 aa12.57□□□□□ -0.4
HDAC6-236ENST00000498808 TIPRLO75663 272 aa12.57□□□□□ -0.4
HDAC6-236ENST00000498808 RENP00797 406 aa12.57□□□□□ -0.4
HDAC6-236ENST00000498808 HLA-DQA2P01906 255 aa12.57□□□□□ -0.4
HDAC6-236ENST00000498808 ACAA1P09110 424 aaPredicted RBP12.57□□□□□ -0.4
HDAC6-236ENST00000498808 HIST1H1CP16403 213 aaKnown RBP12.57□□□□□ -0.4
HDAC6-236ENST00000498808 PRKXP51817 358 aa12.57□□□□□ -0.4
HDAC6-236ENST00000498808 BLCAPP62952 87 aa12.57□□□□□ -0.4
HDAC6-236ENST00000498808 FAM3AP98173 230 aa12.57□□□□□ -0.4
HDAC6-236ENST00000498808 FAM185AQ8N0U4 392 aa12.57□□□□□ -0.4
HDAC6-236ENST00000498808 OR5AU1Q8NGC0 362 aa12.57□□□□□ -0.4
HDAC6-236ENST00000498808 OR4K13Q8NH42 304 aa12.57□□□□□ -0.4
HDAC6-236ENST00000498808 ANKRD19PQ9H560 264 aa12.57□□□□□ -0.4
HDAC6-236ENST00000498808 N6AMT1Q9Y5N5 214 aa12.57□□□□□ -0.4
HDAC6-236ENST00000498808 OR6C68A6NDL8 312 aa12.56□□□□□ -0.4
HDAC6-236ENST00000498808 FAM90A8PA6NJQ4 464 aa12.56□□□□□ -0.4
HDAC6-236ENST00000498808 XRCC2O43543 280 aa12.56□□□□□ -0.4
HDAC6-236ENST00000498808 SYNGR1O43759 233 aa12.56□□□□□ -0.4
HDAC6-236ENST00000498808 VDAC2P45880 294 aaPredicted RBP12.56□□□□□ -0.4
HDAC6-236ENST00000498808 SMARCD3Q6STE5 483 aa12.56□□□□□ -0.4
HDAC6-236ENST00000498808 CCDC121Q6ZUS5 278 aa12.56□□□□□ -0.4
HDAC6-236ENST00000498808 SLC16A9Q7RTY1 509 aa12.56□□□□□ -0.4
HDAC6-236ENST00000498808 RNF144BQ7Z419 303 aa12.56□□□□□ -0.4
HDAC6-236ENST00000498808 C11orf42Q8N5U0 333 aa12.56□□□□□ -0.4
HDAC6-236ENST00000498808 OR2T12Q8NG77 320 aa12.56□□□□□ -0.4
HDAC6-236ENST00000498808 OR10Z1Q8NGY1 313 aa12.56□□□□□ -0.4
HDAC6-236ENST00000498808 STON2Q8WXE9 905 aa12.56□□□□□ -0.4
HDAC6-236ENST00000498808 TMEM120AQ9BXJ8 343 aa12.56□□□□□ -0.4
HDAC6-236ENST00000498808 C19orf12Q9NSK7 152 aa12.56□□□□□ -0.4
HDAC6-236ENST00000498808 GMPR2Q9P2T1 348 aaKnown RBP12.56□□□□□ -0.4
HDAC6-236ENST00000498808 KCNG2Q9UJ96 466 aa12.56□□□□□ -0.4
HDAC6-236ENST00000498808 UNC119BA6NIH7 251 aa12.55□□□□□ -0.4
HDAC6-236ENST00000498808 ARPC3O15145 178 aa12.55□□□□□ -0.4
HDAC6-236ENST00000498808 AKR7A2O43488 359 aa12.55□□□□□ -0.4
HDAC6-236ENST00000498808 PAICSP22234 425 aaKnown RBP12.55□□□□□ -0.4
HDAC6-236ENST00000498808 COX7A1P24310 79 aa12.55□□□□□ -0.4
HDAC6-236ENST00000498808 NOS3P29474 1203 aa12.55□□□□□ -0.4
HDAC6-236ENST00000498808 ERVFRD-1P60508 538 aa12.55□□□□□ -0.4
HDAC6-236ENST00000498808 IFI44LQ53G44 452 aa12.55□□□□□ -0.4
HDAC6-236ENST00000498808 KLHL12Q53G59 568 aa12.55□□□□□ -0.4
HDAC6-236ENST00000498808 ARSJQ5FYB0 599 aaPredicted RBP12.55□□□□□ -0.4
HDAC6-236ENST00000498808 LYPD4Q6UWN0 246 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms