RNA–Protein interactions for RNA: ENST00000498466.1

CCDC58-207, Transcript of coiled-coil domain containing 58, humanhuman

TSL 2

Gene CCDC58, Length 683 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-207ENST00000498466 DGCR6Q14129 220 aa11.34□□□□□ -0.59
CCDC58-207ENST00000498466 MAPRE2Q15555 327 aa11.34□□□□□ -0.59
CCDC58-207ENST00000498466 STUMQ69YW2 141 aa11.34□□□□□ -0.59
CCDC58-207ENST00000498466 CRIP3Q6Q6R5 217 aa11.34□□□□□ -0.59
CCDC58-207ENST00000498466 NDUFA11Q86Y39 141 aa11.34□□□□□ -0.59
CCDC58-207ENST00000498466 SDR9C7Q8NEX9 313 aa11.34□□□□□ -0.59
CCDC58-207ENST00000498466 OR4C15Q8NGM1 316 aa11.34□□□□□ -0.59
CCDC58-207ENST00000498466 SIKE1Q9BRV8 207 aa11.34□□□□□ -0.59
CCDC58-207ENST00000498466 COPS4Q9BT78 406 aa11.34□□□□□ -0.59
CCDC58-207ENST00000498466 SNTG1Q9NSN8 517 aa11.34□□□□□ -0.59
CCDC58-207ENST00000498466 INTS9Q9NV88 658 aaKnown RBP11.34□□□□□ -0.59
CCDC58-207ENST00000498466 SLC25A10Q9UBX3 287 aaPredicted RBP11.34□□□□□ -0.59
CCDC58-207ENST00000498466 KCNG2Q9UJ96 466 aa11.34□□□□□ -0.59
CCDC58-207ENST00000498466 ZNF391Q9UJN7 358 aa11.34□□□□□ -0.59
CCDC58-207ENST00000498466 FAM32AQ9Y421 112 aaKnown RBP11.34□□□□□ -0.59
CCDC58-207ENST00000498466 CAPN7Q9Y6W3 813 aa11.34□□□□□ -0.59
CCDC58-207ENST00000498466 OR6C68A6NDL8 312 aa11.33□□□□□ -0.6
CCDC58-207ENST00000498466 H0YAE9 185 aa11.33□□□□□ -0.6
CCDC58-207ENST00000498466 CDIPTO14735 213 aa11.33□□□□□ -0.6
CCDC58-207ENST00000498466 XRCC2O43543 280 aa11.33□□□□□ -0.6
CCDC58-207ENST00000498466 TIPRLO75663 272 aa11.33□□□□□ -0.6
CCDC58-207ENST00000498466 NDUFB7P17568 137 aa11.33□□□□□ -0.6
CCDC58-207ENST00000498466 CD33P20138 364 aa11.33□□□□□ -0.6
CCDC58-207ENST00000498466 OTX1P32242 354 aaPredicted RBP11.33□□□□□ -0.6
CCDC58-207ENST00000498466 GSK3BP49841 420 aa11.33□□□□□ -0.6
CCDC58-207ENST00000498466 SLC7A2P52569 658 aa11.33□□□□□ -0.6
CCDC58-207ENST00000498466 KLF10Q13118 480 aa11.33□□□□□ -0.6
CCDC58-207ENST00000498466 SEC23BQ15437 767 aa11.33□□□□□ -0.6
CCDC58-207ENST00000498466 TAF13Q15543 124 aa11.33□□□□□ -0.6
CCDC58-207ENST00000498466 ATPAF1Q5TC12 328 aaPredicted RBP11.33□□□□□ -0.6
CCDC58-207ENST00000498466 DUS3LQ96G46 650 aaKnown RBP11.33□□□□□ -0.6
CCDC58-207ENST00000498466 CITED2Q99967 270 aaPredicted RBP11.33□□□□□ -0.6
CCDC58-207ENST00000498466 IFT27Q9BW83 186 aa11.33□□□□□ -0.6
CCDC58-207ENST00000498466 MEGF9Q9H1U4 602 aa11.33□□□□□ -0.6
CCDC58-207ENST00000498466 OR52D1Q9H346 318 aa11.33□□□□□ -0.6
CCDC58-207ENST00000498466 MRGBPQ9NV56 204 aa11.33□□□□□ -0.6
CCDC58-207ENST00000498466 CMTM6Q9NX76 183 aa11.33□□□□□ -0.6
CCDC58-207ENST00000498466 HAO2Q9NYQ3 351 aa11.33□□□□□ -0.6
CCDC58-207ENST00000498466 DNAH9Q9NYC9 4486 aa11.33□□□□□ -0.6
CCDC58-207ENST00000498466 TRBV4-1A0A0J9YWV2 114 aa11.32□□□□□ -0.6
CCDC58-207ENST00000498466 ARPC3O15145 178 aa11.32□□□□□ -0.6
CCDC58-207ENST00000498466 TBX1O43435 398 aa11.32□□□□□ -0.6
CCDC58-207ENST00000498466 CHST1O43916 411 aa11.32□□□□□ -0.6
CCDC58-207ENST00000498466 EDF1O60869 148 aaKnown RBP11.32□□□□□ -0.6
CCDC58-207ENST00000498466 TFF1P04155 84 aa11.32□□□□□ -0.6
CCDC58-207ENST00000498466 IGLL1P15814 213 aa11.32□□□□□ -0.6
CCDC58-207ENST00000498466 BMXP51813 675 aa11.32□□□□□ -0.6
CCDC58-207ENST00000498466 LIPEQ05469 1076 aa11.32□□□□□ -0.6
CCDC58-207ENST00000498466 HABP2Q14520 560 aaPredicted RBP11.32□□□□□ -0.6
CCDC58-207ENST00000498466 AANATQ16613 207 aa11.32□□□□□ -0.6
CCDC58-207ENST00000498466 DGUOKQ16854 277 aa11.32□□□□□ -0.6
CCDC58-207ENST00000498466 DEFB121Q5J5C9 76 aa11.32□□□□□ -0.6
CCDC58-207ENST00000498466 HCP5Q6MZN7 132 aa11.32□□□□□ -0.6
CCDC58-207ENST00000498466 LIAT1Q6ZQX7 453 aa11.32□□□□□ -0.6
CCDC58-207ENST00000498466 SLC16A9Q7RTY1 509 aa11.32□□□□□ -0.6
CCDC58-207ENST00000498466 DCXRQ7Z4W1 244 aa11.32□□□□□ -0.6
CCDC58-207ENST00000498466 OR5D13Q8NGL4 314 aa11.32□□□□□ -0.6
CCDC58-207ENST00000498466 OR52J3Q8NH60 311 aa11.32□□□□□ -0.6
CCDC58-207ENST00000498466 MED30Q96HR3 178 aa11.32□□□□□ -0.6
CCDC58-207ENST00000498466 ATP6V1G3Q96LB4 118 aa11.32□□□□□ -0.6
CCDC58-207ENST00000498466 GAFA1Q96PS6 74 aa11.32□□□□□ -0.6
CCDC58-207ENST00000498466 DNTTIP1Q9H147 329 aa11.32□□□□□ -0.6
CCDC58-207ENST00000498466 WDR13Q9H1Z4 485 aa11.32□□□□□ -0.6
CCDC58-207ENST00000498466 ZNF702PQ9H963 129 aa11.32□□□□□ -0.6
CCDC58-207ENST00000498466 CENPMQ9NSP4 180 aa11.32□□□□□ -0.6
CCDC58-207ENST00000498466 SERTAD4Q9NUC0 356 aa11.32□□□□□ -0.6
CCDC58-207ENST00000498466 AP3M1Q9Y2T2 418 aa11.32□□□□□ -0.6
CCDC58-207ENST00000498466 NOTCH3Q9UM47 2321 aa11.32□□□□□ -0.6
CCDC58-207ENST00000498466 TVP23AA6NH52 213 aa11.31□□□□□ -0.6
CCDC58-207ENST00000498466 K7EIL1 84 aa11.31□□□□□ -0.6
CCDC58-207ENST00000498466 PEX14O75381 377 aa11.31□□□□□ -0.6
CCDC58-207ENST00000498466 PYCR1P32322 319 aa11.31□□□□□ -0.6
CCDC58-207ENST00000498466 GNALP38405 381 aa11.31□□□□□ -0.6
CCDC58-207ENST00000498466 FAM3AP98173 230 aa11.31□□□□□ -0.6
CCDC58-207ENST00000498466 TIGD6Q17RP2 521 aa11.31□□□□□ -0.6
CCDC58-207ENST00000498466 SLC35F1Q5T1Q4 408 aa11.31□□□□□ -0.6
CCDC58-207ENST00000498466 ZNF788Q6ZQV5 615 aa11.31□□□□□ -0.6
CCDC58-207ENST00000498466 ZDHHC21Q8IVQ6 265 aa11.31□□□□□ -0.6
CCDC58-207ENST00000498466 PROKR2Q8NFJ6 384 aa11.31□□□□□ -0.6
CCDC58-207ENST00000498466 FAM162AQ96A26 154 aa11.31□□□□□ -0.6
CCDC58-207ENST00000498466 SPSB4Q96A44 273 aa11.31□□□□□ -0.6
CCDC58-207ENST00000498466 AJUBAQ96IF1 538 aa11.31□□□□□ -0.6
CCDC58-207ENST00000498466 RAB3IPQ96QF0 476 aaPredicted RBP11.31□□□□□ -0.6
CCDC58-207ENST00000498466 KCNJ15Q99712 375 aa11.31□□□□□ -0.6
CCDC58-207ENST00000498466 PPP1R3EQ9H7J1 279 aa11.31□□□□□ -0.6
CCDC58-207ENST00000498466 ELL3Q9HB65 397 aaPredicted RBP11.31□□□□□ -0.6
CCDC58-207ENST00000498466 NDUFAF4Q9P032 175 aa11.31□□□□□ -0.6
CCDC58-207ENST00000498466 TENM3Q9P273 2699 aa11.31□□□□□ -0.6
CCDC58-207ENST00000498466 ADARB2-AS1A8MUL3 147 aa11.3□□□□□ -0.6
CCDC58-207ENST00000498466 DIRAS1O95057 198 aa11.3□□□□□ -0.6
CCDC58-207ENST00000498466 ANXA2P07355 339 aaKnown RBP11.3□□□□□ -0.6
CCDC58-207ENST00000498466 SPARCP09486 303 aa11.3□□□□□ -0.6
CCDC58-207ENST00000498466 PSKH1P11801 424 aa11.3□□□□□ -0.6
CCDC58-207ENST00000498466 RHCEP18577 417 aa11.3□□□□□ -0.6
CCDC58-207ENST00000498466 CAV3P56539 151 aa11.3□□□□□ -0.6
CCDC58-207ENST00000498466 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.3□□□□□ -0.6
CCDC58-207ENST00000498466 KRT72Q14CN4 511 aa11.3□□□□□ -0.6
CCDC58-207ENST00000498466 LYPD4Q6UWN0 246 aa11.3□□□□□ -0.6
CCDC58-207ENST00000498466 ARPINQ7Z6K5 226 aa11.3□□□□□ -0.6
CCDC58-207ENST00000498466 CPLX4Q7Z7G2 160 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms