RNA–Protein interactions for RNA: ENST00000498438.1

HOXD11-202, Transcript of homeobox D11, humanhuman

TSL 1 (best)

Gene HOXD11, Length 1,259 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD11-202ENST00000498438 DEGS2Q6QHC5 323 aa15.35■□□□□ 0.05
HOXD11-202ENST00000498438 FTMTQ8N4E7 242 aa15.35■□□□□ 0.05
HOXD11-202ENST00000498438 ZNF418Q8TF45 676 aaPredicted RBP15.35■□□□□ 0.05
HOXD11-202ENST00000498438 ASB17Q8WXJ9 295 aa15.35■□□□□ 0.05
HOXD11-202ENST00000498438 OR8B4Q96RC9 309 aa15.35■□□□□ 0.05
HOXD11-202ENST00000498438 MRI1Q9BV20 369 aa15.35■□□□□ 0.05
HOXD11-202ENST00000498438 GABARAPL3Q9BY60 117 aa15.35■□□□□ 0.05
HOXD11-202ENST00000498438 MROQ9BYG7 248 aa15.35■□□□□ 0.05
HOXD11-202ENST00000498438 RIBC2Q9H4K1 309 aa15.35■□□□□ 0.05
HOXD11-202ENST00000498438 H2AFY2Q9P0M6 372 aaPredicted RBP15.35■□□□□ 0.05
HOXD11-202ENST00000498438 CLN8Q9UBY8 286 aa15.35■□□□□ 0.05
HOXD11-202ENST00000498438 ZNF391Q9UJN7 358 aa15.35■□□□□ 0.05
HOXD11-202ENST00000498438 A0A0A6YYJ9 748 aa15.34■□□□□ 0.05
HOXD11-202ENST00000498438 IGHV2-70DA0A0C4DH43 119 aa15.34■□□□□ 0.05
HOXD11-202ENST00000498438 TMEM269A0A1B0GVZ9 245 aa15.34■□□□□ 0.05
HOXD11-202ENST00000498438 OOEPA6NGQ2 149 aa15.34■□□□□ 0.05
HOXD11-202ENST00000498438 PHYHO14832 338 aa15.34■□□□□ 0.05
HOXD11-202ENST00000498438 EGR1P18146 543 aa15.34■□□□□ 0.05
HOXD11-202ENST00000498438 POLR2IP36954 125 aaKnown RBP15.34■□□□□ 0.05
HOXD11-202ENST00000498438 PSMB10P40306 273 aa15.34■□□□□ 0.05
HOXD11-202ENST00000498438 CSNK2BP67870 215 aa15.34■□□□□ 0.05
HOXD11-202ENST00000498438 ROM1Q03395 351 aa15.34■□□□□ 0.05
HOXD11-202ENST00000498438 KCNJ8Q15842 424 aa15.34■□□□□ 0.05
HOXD11-202ENST00000498438 GID4Q8IVV7 300 aa15.34■□□□□ 0.05
HOXD11-202ENST00000498438 C11orf53Q8IXP5 236 aa15.34■□□□□ 0.05
HOXD11-202ENST00000498438 SLC35F2Q8IXU6 374 aa15.34■□□□□ 0.05
HOXD11-202ENST00000498438 ZNF679Q8IYX0 411 aa15.34■□□□□ 0.05
HOXD11-202ENST00000498438 GCSAMQ8N6F7 178 aa15.34■□□□□ 0.05
HOXD11-202ENST00000498438 OR1M1Q8NGA1 313 aa15.34■□□□□ 0.05
HOXD11-202ENST00000498438 DACT3Q96B18 629 aaPredicted RBP15.34■□□□□ 0.05
HOXD11-202ENST00000498438 ITPKCQ96DU7 683 aa15.34■□□□□ 0.05
HOXD11-202ENST00000498438 SLC6A7Q99884 636 aa15.34■□□□□ 0.05
HOXD11-202ENST00000498438 ADGRL4Q9HBW9 690 aa15.34■□□□□ 0.05
HOXD11-202ENST00000498438 IKZF2Q9UKS7 526 aa15.34■□□□□ 0.05
HOXD11-202ENST00000498438 ANK2Q01484 3957 aa15.34■□□□□ 0.05
HOXD11-202ENST00000498438 TRAV38-1A0A0B4J264 116 aa15.33■□□□□ 0.04
HOXD11-202ENST00000498438 ACOD1A6NK06 481 aa15.33■□□□□ 0.04
HOXD11-202ENST00000498438 ANXA2P2A6NMY6 339 aa15.33■□□□□ 0.04
HOXD11-202ENST00000498438 ZNF850A8MQ14 1090 aa15.33■□□□□ 0.04
HOXD11-202ENST00000498438 H3BNX3 289 aa15.33■□□□□ 0.04
HOXD11-202ENST00000498438 ZNF254O75437 659 aa15.33■□□□□ 0.04
HOXD11-202ENST00000498438 RIDAP52758 137 aaKnown RBP15.33■□□□□ 0.04
HOXD11-202ENST00000498438 CXCR4P61073 352 aa15.33■□□□□ 0.04
HOXD11-202ENST00000498438 IL5RAQ01344 420 aa15.33■□□□□ 0.04
HOXD11-202ENST00000498438 PAX8Q06710 450 aa15.33■□□□□ 0.04
HOXD11-202ENST00000498438 PRDX4Q13162 271 aa15.33■□□□□ 0.04
HOXD11-202ENST00000498438 ZNF829Q3KNS6 432 aaPredicted RBP15.33■□□□□ 0.04
HOXD11-202ENST00000498438 WDR25Q64LD2 544 aaPredicted RBP15.33■□□□□ 0.04
HOXD11-202ENST00000498438 ZNF322Q6U7Q0 402 aaPredicted RBP15.33■□□□□ 0.04
HOXD11-202ENST00000498438 BTNL3Q6UXE8 466 aa15.33■□□□□ 0.04
HOXD11-202ENST00000498438 ZNF841Q6ZN19 808 aa15.33■□□□□ 0.04
HOXD11-202ENST00000498438 BPIFB2Q8N4F0 458 aa15.33■□□□□ 0.04
HOXD11-202ENST00000498438 LRRC29Q8WV35 223 aa15.33■□□□□ 0.04
HOXD11-202ENST00000498438 RAB40AQ8WXH6 277 aa15.33■□□□□ 0.04
HOXD11-202ENST00000498438 C22orf15Q8WYQ4 148 aa15.33■□□□□ 0.04
HOXD11-202ENST00000498438 PKP2Q99959 881 aa15.33■□□□□ 0.04
HOXD11-202ENST00000498438 MICU1Q9BPX6 476 aa15.33■□□□□ 0.04
HOXD11-202ENST00000498438 RBM4BQ9BQ04 359 aaKnown RBP15.33■□□□□ 0.04
HOXD11-202ENST00000498438 OSBPL10Q9BXB5 764 aa15.33■□□□□ 0.04
HOXD11-202ENST00000498438 PBOV1Q9GZY1 135 aa15.33■□□□□ 0.04
HOXD11-202ENST00000498438 TRIM36Q9NQ86 728 aa15.33■□□□□ 0.04
HOXD11-202ENST00000498438 CTSZQ9UBR2 303 aa15.33■□□□□ 0.04
HOXD11-202ENST00000498438 MPC1Q9Y5U8 109 aa15.33■□□□□ 0.04
HOXD11-202ENST00000498438 A0A0U1RQV5 110 aa15.32■□□□□ 0.04
HOXD11-202ENST00000498438 CST4P01036 141 aa15.32■□□□□ 0.04
HOXD11-202ENST00000498438 LHBP01229 141 aa15.32■□□□□ 0.04
HOXD11-202ENST00000498438 DCTDP32321 178 aa15.32■□□□□ 0.04
HOXD11-202ENST00000498438 HILS1P60008 231 aa15.32■□□□□ 0.04
HOXD11-202ENST00000498438 MFGE8Q08431 387 aaPredicted RBP15.32■□□□□ 0.04
HOXD11-202ENST00000498438 KLF17Q5JT82 389 aaPredicted RBP15.32■□□□□ 0.04
HOXD11-202ENST00000498438 WDR82Q6UXN9 313 aa15.32■□□□□ 0.04
HOXD11-202ENST00000498438 USP43Q70EL4 1123 aa15.32■□□□□ 0.04
HOXD11-202ENST00000498438 COMMD2Q86X83 199 aa15.32■□□□□ 0.04
HOXD11-202ENST00000498438 FAM90A1Q86YD7 464 aa15.32■□□□□ 0.04
HOXD11-202ENST00000498438 GALNT4Q8N4A0 578 aa15.32■□□□□ 0.04
HOXD11-202ENST00000498438 FAM81AQ8TBF8 368 aa15.32■□□□□ 0.04
HOXD11-202ENST00000498438 PIGCQ92535 297 aa15.32■□□□□ 0.04
HOXD11-202ENST00000498438 MNTQ99583 582 aa15.32■□□□□ 0.04
HOXD11-202ENST00000498438 NUDT16L1Q9BRJ7 211 aaKnown RBP15.32■□□□□ 0.04
HOXD11-202ENST00000498438 RTL8AQ9BWD3 113 aa15.32■□□□□ 0.04
HOXD11-202ENST00000498438 SUCNR1Q9BXA5 334 aa15.32■□□□□ 0.04
HOXD11-202ENST00000498438 TLNRD1Q9H1K6 362 aa15.32■□□□□ 0.04
HOXD11-202ENST00000498438 RNPEPL1Q9HAU8 725 aa15.32■□□□□ 0.04
HOXD11-202ENST00000498438 ABCB9Q9NP78 766 aa15.32■□□□□ 0.04
HOXD11-202ENST00000498438 CLN6Q9NWW5 311 aa15.32■□□□□ 0.04
HOXD11-202ENST00000498438 HAO2Q9NYQ3 351 aa15.32■□□□□ 0.04
HOXD11-202ENST00000498438 IGHV3OR15-7A0A075B7D8 119 aa15.31■□□□□ 0.04
HOXD11-202ENST00000498438 C22orf46C9J442 243 aa15.31■□□□□ 0.04
HOXD11-202ENST00000498438 ZNF670-ZNF695F2Z2N8 137 aa15.31■□□□□ 0.04
HOXD11-202ENST00000498438 TNFRSF13BO14836 293 aaPredicted RBP15.31■□□□□ 0.04
HOXD11-202ENST00000498438 MAGEB4O15481 346 aaPredicted RBP15.31■□□□□ 0.04
HOXD11-202ENST00000498438 ADAM20O43506 726 aa15.31■□□□□ 0.04
HOXD11-202ENST00000498438 GYPAP02724 150 aa15.31■□□□□ 0.04
HOXD11-202ENST00000498438 TEX36Q5VZQ5 186 aa15.31■□□□□ 0.04
HOXD11-202ENST00000498438 ZDHHC23Q8IYP9 409 aa15.31■□□□□ 0.04
HOXD11-202ENST00000498438 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP15.31■□□□□ 0.04
HOXD11-202ENST00000498438 OR51G2Q8NGK0 314 aa15.31■□□□□ 0.04
HOXD11-202ENST00000498438 OR51E1Q8TCB6 317 aa15.31■□□□□ 0.04
HOXD11-202ENST00000498438 HPSE2Q8WWQ2 592 aa15.31■□□□□ 0.04
HOXD11-202ENST00000498438 OR5P3Q8WZ94 311 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms