RNA–Protein interactions for RNA: ENST00000498041.1

RIF1-212, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 776 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-212ENST00000498041 KCTD14Q9BQ13 255 aaPredicted RBP1.95□□□□□ -2.1
RIF1-212ENST00000498041 TIMM29Q9BSF4 260 aa1.95□□□□□ -2.1
RIF1-212ENST00000498041 PLA2G12AQ9BZM1 189 aa1.95□□□□□ -2.1
RIF1-212ENST00000498041 Q9H3A6 140 aa1.95□□□□□ -2.1
RIF1-212ENST00000498041 KIR3DX1Q9H7L2 352 aa1.95□□□□□ -2.1
RIF1-212ENST00000498041 KAT8Q9H7Z6 458 aaKnown RBP1.95□□□□□ -2.1
RIF1-212ENST00000498041 ISG20L2Q9H9L3 353 aaKnown RBP1.95□□□□□ -2.1
RIF1-212ENST00000498041 EML4Q9HC35 981 aaKnown RBP1.95□□□□□ -2.1
RIF1-212ENST00000498041 ADAP2Q9NPF8 381 aa1.95□□□□□ -2.1
RIF1-212ENST00000498041 TRPV5Q9NQA5 729 aa1.95□□□□□ -2.1
RIF1-212ENST00000498041 ZNF226Q9NYT6 803 aa1.95□□□□□ -2.1
RIF1-212ENST00000498041 MAT2BQ9NZL9 334 aa1.95□□□□□ -2.1
RIF1-212ENST00000498041 CTSFQ9UBX1 484 aa1.95□□□□□ -2.1
RIF1-212ENST00000498041 CLEC2DQ9UHP7 191 aa1.95□□□□□ -2.1
RIF1-212ENST00000498041 RAB23Q9ULC3 237 aa1.95□□□□□ -2.1
RIF1-212ENST00000498041 EIF3LQ9Y262 564 aaKnown RBP1.95□□□□□ -2.1
RIF1-212ENST00000498041 C15orf41Q9Y2V0 281 aa1.95□□□□□ -2.1
RIF1-212ENST00000498041 YARS2Q9Y2Z4 477 aaKnown RBP1.95□□□□□ -2.1
RIF1-212ENST00000498041 EXOSC1Q9Y3B2 195 aaKnown RBP1.95□□□□□ -2.1
RIF1-212ENST00000498041 LRRC42Q9Y546 428 aa1.95□□□□□ -2.1
RIF1-212ENST00000498041 DOPEY1Q5JWR5 2465 aa1.95□□□□□ -2.1
RIF1-212ENST00000498041 ALPK2Q86TB3 2170 aa1.95□□□□□ -2.1
RIF1-212ENST00000498041 CFAP47Q6ZTR5 3102 aa1.95□□□□□ -2.1
RIF1-212ENST00000498041 UNC80Q8N2C7 3258 aa1.94□□□□□ -2.1
RIF1-212ENST00000498041 A0A096LPI6 279 aa1.94□□□□□ -2.1
RIF1-212ENST00000498041 A0A0J9YY10 115 aa1.94□□□□□ -2.1
RIF1-212ENST00000498041 RNF103-CHMP3A0A140T963 221 aa1.94□□□□□ -2.1
RIF1-212ENST00000498041 FAM231BA6NCW3 169 aa1.94□□□□□ -2.1
RIF1-212ENST00000498041 CFAP73A6NFT4 308 aa1.94□□□□□ -2.1
RIF1-212ENST00000498041 CPSF4LA6NMK7 179 aaKnown RBP1.94□□□□□ -2.1
RIF1-212ENST00000498041 SYCE1LA8MT33 242 aa1.94□□□□□ -2.1
RIF1-212ENST00000498041 IDSB3KWA1 339 aa1.94□□□□□ -2.1
RIF1-212ENST00000498041 H3BTX0 84 aa1.94□□□□□ -2.1
RIF1-212ENST00000498041 KPNA4O00629 521 aaPredicted RBP1.94□□□□□ -2.1
RIF1-212ENST00000498041 RFXANKO14593 260 aa1.94□□□□□ -2.1
RIF1-212ENST00000498041 CDC42EP2O14613 210 aa1.94□□□□□ -2.1
RIF1-212ENST00000498041 NVLO15381 856 aaKnown RBP1.94□□□□□ -2.1
RIF1-212ENST00000498041 DUX1O43812 170 aa1.94□□□□□ -2.1
RIF1-212ENST00000498041 MFN2O95140 757 aa1.94□□□□□ -2.1
RIF1-212ENST00000498041 SOX14O95416 240 aa1.94□□□□□ -2.1
RIF1-212ENST00000498041 H6PDO95479 791 aa1.94□□□□□ -2.1
RIF1-212ENST00000498041 LALBAP00709 142 aa1.94□□□□□ -2.1
RIF1-212ENST00000498041 IGLV1-47P01700 117 aa1.94□□□□□ -2.1
RIF1-212ENST00000498041 HMGN2P05204 90 aaKnown RBP1.94□□□□□ -2.1
RIF1-212ENST00000498041 IDO1P14902 403 aa1.94□□□□□ -2.1
RIF1-212ENST00000498041 GPX2P18283 190 aa1.94□□□□□ -2.1
RIF1-212ENST00000498041 HIST1H1TP22492 207 aaPredicted RBP1.94□□□□□ -2.1
RIF1-212ENST00000498041 AHCYP23526 432 aa1.94□□□□□ -2.1
RIF1-212ENST00000498041 PAX7P23759 505 aa1.94□□□□□ -2.1
RIF1-212ENST00000498041 HTR1EP28566 365 aa1.94□□□□□ -2.1
RIF1-212ENST00000498041 CMPK1P30085 196 aa1.94□□□□□ -2.1
RIF1-212ENST00000498041 RRM2P31350 389 aa1.94□□□□□ -2.1
RIF1-212ENST00000498041 GABRA3P34903 492 aa1.94□□□□□ -2.1
RIF1-212ENST00000498041 PTGDSP41222 190 aa1.94□□□□□ -2.1
RIF1-212ENST00000498041 RPS27P42677 84 aaKnown RBP1.94□□□□□ -2.1
RIF1-212ENST00000498041 SSR2P43308 183 aa1.94□□□□□ -2.1
RIF1-212ENST00000498041 STARP49675 285 aa1.94□□□□□ -2.1
RIF1-212ENST00000498041 ZNF136P52737 540 aa1.94□□□□□ -2.1
RIF1-212ENST00000498041 UGT2B15P54855 530 aa1.94□□□□□ -2.1
RIF1-212ENST00000498041 LSM3P62310 102 aaKnown RBP1.94□□□□□ -2.1
RIF1-212ENST00000498041 LRRC74AQ0VAA2 488 aa1.94□□□□□ -2.1
RIF1-212ENST00000498041 PMS2P3Q13401 168 aa1.94□□□□□ -2.1
RIF1-212ENST00000498041 AQP6Q13520 282 aa1.94□□□□□ -2.1
RIF1-212ENST00000498041 RIPK1Q13546 671 aa1.94□□□□□ -2.1
RIF1-212ENST00000498041 UBE2V2Q15819 145 aa1.94□□□□□ -2.1
RIF1-212ENST00000498041 TRMT5Q32P41 509 aaKnown RBP1.94□□□□□ -2.1
RIF1-212ENST00000498041 ADPRMQ3LIE5 342 aa1.94□□□□□ -2.1
RIF1-212ENST00000498041 GGTA1PQ4G0N0 100 aa1.94□□□□□ -2.1
RIF1-212ENST00000498041 MLIPQ5VWP3 458 aa1.94□□□□□ -2.1
RIF1-212ENST00000498041 SLX4IPQ5VYV7 408 aa1.94□□□□□ -2.1
RIF1-212ENST00000498041 METTL21CQ5VZV1 264 aa1.94□□□□□ -2.1
RIF1-212ENST00000498041 SAXO2Q658L1 398 aa1.94□□□□□ -2.1
RIF1-212ENST00000498041 OR52E8Q6IFG1 317 aa1.94□□□□□ -2.1
RIF1-212ENST00000498041 LCN8Q6JVE9 175 aa1.94□□□□□ -2.1
RIF1-212ENST00000498041 BTNL3Q6UXE8 466 aa1.94□□□□□ -2.1
RIF1-212ENST00000498041 UNC5DQ6UXZ4 953 aa1.94□□□□□ -2.1
RIF1-212ENST00000498041 NCCRP1Q6ZVX7 275 aaPredicted RBP1.94□□□□□ -2.1
RIF1-212ENST00000498041 ASCL5Q7RTU5 278 aa1.94□□□□□ -2.1
RIF1-212ENST00000498041 MARCH3Q86UD3 253 aa1.94□□□□□ -2.1
RIF1-212ENST00000498041 ZFP41Q8N8Y5 198 aa1.94□□□□□ -2.1
RIF1-212ENST00000498041 CATSPER1Q8NEC5 780 aa1.94□□□□□ -2.1
RIF1-212ENST00000498041 DEFB124Q8NES8 71 aa1.94□□□□□ -2.1
RIF1-212ENST00000498041 OR51L1Q8NGJ5 315 aa1.94□□□□□ -2.1
RIF1-212ENST00000498041 OR51Q1Q8NH59 317 aa1.94□□□□□ -2.1
RIF1-212ENST00000498041 NT5CQ8TCD5 201 aa1.94□□□□□ -2.1
RIF1-212ENST00000498041 DNAJC9Q8WXX5 260 aa1.94□□□□□ -2.1
RIF1-212ENST00000498041 RPL3LQ92901 407 aaKnown RBP1.94□□□□□ -2.1
RIF1-212ENST00000498041 NCLNQ969V3 563 aa1.94□□□□□ -2.1
RIF1-212ENST00000498041 EFHD2Q96C19 240 aaPredicted RBP1.94□□□□□ -2.1
RIF1-212ENST00000498041 PPCDCQ96CD2 204 aa1.94□□□□□ -2.1
RIF1-212ENST00000498041 CCDC126Q96EE4 140 aa1.94□□□□□ -2.1
RIF1-212ENST00000498041 SH3YL1Q96HL8 342 aaPredicted RBP1.94□□□□□ -2.1
RIF1-212ENST00000498041 PYURFQ96I23 114 aa1.94□□□□□ -2.1
RIF1-212ENST00000498041 CCDC115Q96NT0 180 aa1.94□□□□□ -2.1
RIF1-212ENST00000498041 PPP1R2P1Q96PQ5 205 aa1.94□□□□□ -2.1
RIF1-212ENST00000498041 IL4I1Q96RQ9 567 aa1.94□□□□□ -2.1
RIF1-212ENST00000498041 AIF1LQ9BQI0 150 aa1.94□□□□□ -2.1
RIF1-212ENST00000498041 PRSS27Q9BQR3 290 aa1.94□□□□□ -2.1
RIF1-212ENST00000498041 NXF5Q9H1B4 397 aaKnown RBP1.94□□□□□ -2.1
RIF1-212ENST00000498041 PROK2Q9HC23 129 aa1.94□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms