RNA–Protein interactions for RNA: ENST00000496043.5

PTPRF-214, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 5

Gene PTPRF, Length 415 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-214ENST00000496043 NIPAL2Q9H841 368 aa10.59□□□□□ -0.71
PTPRF-214ENST00000496043 FAM53CQ9NYF3 392 aa10.59□□□□□ -0.71
PTPRF-214ENST00000496043 KIF17Q9P2E2 1029 aa10.59□□□□□ -0.71
PTPRF-214ENST00000496043 KAAG1Q9UBP8 84 aa10.59□□□□□ -0.71
PTPRF-214ENST00000496043 CTSZQ9UBR2 303 aa10.59□□□□□ -0.71
PTPRF-214ENST00000496043 POMPQ9Y244 141 aa10.59□□□□□ -0.71
PTPRF-214ENST00000496043 RHBDD3Q9Y3P4 386 aa10.59□□□□□ -0.71
PTPRF-214ENST00000496043 MPC1Q9Y5U8 109 aa10.59□□□□□ -0.71
PTPRF-214ENST00000496043 TRAV40A0A0B4J280 105 aa10.58□□□□□ -0.72
PTPRF-214ENST00000496043 ANXA2P2A6NMY6 339 aa10.58□□□□□ -0.72
PTPRF-214ENST00000496043 ZNF879B4DU55 563 aa10.58□□□□□ -0.72
PTPRF-214ENST00000496043 C22orf46C9J442 243 aa10.58□□□□□ -0.72
PTPRF-214ENST00000496043 CLDN34H7C241 214 aa10.58□□□□□ -0.72
PTPRF-214ENST00000496043 P2RY10O00398 339 aa10.58□□□□□ -0.72
PTPRF-214ENST00000496043 SELENOFO60613 162 aa10.58□□□□□ -0.72
PTPRF-214ENST00000496043 ECDO95905 644 aaPredicted RBP10.58□□□□□ -0.72
PTPRF-214ENST00000496043 RNASE1P07998 156 aaKnown RBP10.58□□□□□ -0.72
PTPRF-214ENST00000496043 MUC1P15941 1255 aaPredicted RBP10.58□□□□□ -0.72
PTPRF-214ENST00000496043 CFHR2P36980 270 aa10.58□□□□□ -0.72
PTPRF-214ENST00000496043 CRISP1P54107 249 aa10.58□□□□□ -0.72
PTPRF-214ENST00000496043 IL5RAQ01344 420 aa10.58□□□□□ -0.72
PTPRF-214ENST00000496043 POU4F2Q12837 409 aa10.58□□□□□ -0.72
PTPRF-214ENST00000496043 SLC9A3R2Q15599 337 aa10.58□□□□□ -0.72
PTPRF-214ENST00000496043 TMEM236Q5W0B7 351 aa10.58□□□□□ -0.72
PTPRF-214ENST00000496043 KRT77Q7Z794 578 aa10.58□□□□□ -0.72
PTPRF-214ENST00000496043 FAM90A1Q86YD7 464 aa10.58□□□□□ -0.72
PTPRF-214ENST00000496043 GALNT4Q8N4A0 578 aa10.58□□□□□ -0.72
PTPRF-214ENST00000496043 LRRC29Q8WV35 223 aa10.58□□□□□ -0.72
PTPRF-214ENST00000496043 DNAJC9Q8WXX5 260 aa10.58□□□□□ -0.72
PTPRF-214ENST00000496043 ZDHHC16Q969W1 377 aa10.58□□□□□ -0.72
PTPRF-214ENST00000496043 C1orf147Q96MC9 270 aaPredicted RBP10.58□□□□□ -0.72
PTPRF-214ENST00000496043 HIST1H2AAQ96QV6 131 aa10.58□□□□□ -0.72
PTPRF-214ENST00000496043 PCGF1Q9BSM1 259 aa10.58□□□□□ -0.72
PTPRF-214ENST00000496043 PAPOLGQ9BWT3 736 aaKnown RBP10.58□□□□□ -0.72
PTPRF-214ENST00000496043 SLC25A19Q9HC21 320 aa10.58□□□□□ -0.72
PTPRF-214ENST00000496043 ABCB9Q9NP78 766 aa10.58□□□□□ -0.72
PTPRF-214ENST00000496043 TVP23BQ9NYZ1 205 aa10.58□□□□□ -0.72
PTPRF-214ENST00000496043 ZNF391Q9UJN7 358 aa10.58□□□□□ -0.72
PTPRF-214ENST00000496043 LAMP5Q9UJQ1 280 aa10.58□□□□□ -0.72
PTPRF-214ENST00000496043 SOX21Q9Y651 276 aaPredicted RBP10.58□□□□□ -0.72
PTPRF-214ENST00000496043 DOCK11Q5JSL3 2073 aa10.57□□□□□ -0.72
PTPRF-214ENST00000496043 IGHV3OR15-7A0A075B7D8 119 aa10.57□□□□□ -0.72
PTPRF-214ENST00000496043 ACOD1A6NK06 481 aa10.57□□□□□ -0.72
PTPRF-214ENST00000496043 DVL1O14640 695 aa10.57□□□□□ -0.72
PTPRF-214ENST00000496043 TMPRSS2O15393 492 aa10.57□□□□□ -0.72
PTPRF-214ENST00000496043 GSC2O15499 205 aa10.57□□□□□ -0.72
PTPRF-214ENST00000496043 TOX4O94842 621 aa10.57□□□□□ -0.72
PTPRF-214ENST00000496043 CST4P01036 141 aa10.57□□□□□ -0.72
PTPRF-214ENST00000496043 ALOX5APP20292 161 aa10.57□□□□□ -0.72
PTPRF-214ENST00000496043 APOFQ13790 326 aa10.57□□□□□ -0.72
PTPRF-214ENST00000496043 METTL11BQ5VVY1 283 aa10.57□□□□□ -0.72
PTPRF-214ENST00000496043 C16orf87Q6PH81 154 aa10.57□□□□□ -0.72
PTPRF-214ENST00000496043 KCTD18Q6PI47 426 aaPredicted RBP10.57□□□□□ -0.72
PTPRF-214ENST00000496043 BTN2A1Q7KYR7 527 aa10.57□□□□□ -0.72
PTPRF-214ENST00000496043 WDR86Q86TI4 376 aa10.57□□□□□ -0.72
PTPRF-214ENST00000496043 BBS1Q8NFJ9 593 aa10.57□□□□□ -0.72
PTPRF-214ENST00000496043 PIGCQ92535 297 aa10.57□□□□□ -0.72
PTPRF-214ENST00000496043 WDFY2Q96P53 400 aa10.57□□□□□ -0.72
PTPRF-214ENST00000496043 TEAD3Q99594 435 aa10.57□□□□□ -0.72
PTPRF-214ENST00000496043 ZNF747Q9BV97 191 aa10.57□□□□□ -0.72
PTPRF-214ENST00000496043 RTL8AQ9BWD3 113 aa10.57□□□□□ -0.72
PTPRF-214ENST00000496043 YIPF3Q9GZM5 350 aa10.57□□□□□ -0.72
PTPRF-214ENST00000496043 PRDM13Q9H4Q3 707 aa10.57□□□□□ -0.72
PTPRF-214ENST00000496043 PPP1R3EQ9H7J1 279 aa10.57□□□□□ -0.72
PTPRF-214ENST00000496043 CNTD2Q9H8S5 307 aa10.57□□□□□ -0.72
PTPRF-214ENST00000496043 PAPOLBQ9NRJ5 636 aaKnown RBP10.57□□□□□ -0.72
PTPRF-214ENST00000496043 ZNF850A8MQ14 1090 aa10.56□□□□□ -0.72
PTPRF-214ENST00000496043 CDIPTO14735 213 aa10.56□□□□□ -0.72
PTPRF-214ENST00000496043 EGR1P18146 543 aa10.56□□□□□ -0.72
PTPRF-214ENST00000496043 SLC2A5P22732 501 aa10.56□□□□□ -0.72
PTPRF-214ENST00000496043 HCCSP53701 268 aa10.56□□□□□ -0.72
PTPRF-214ENST00000496043 ARF6P62330 175 aa10.56□□□□□ -0.72
PTPRF-214ENST00000496043 PRDX4Q13162 271 aa10.56□□□□□ -0.72
PTPRF-214ENST00000496043 PDCD1Q15116 288 aa10.56□□□□□ -0.72
PTPRF-214ENST00000496043 DEFB112Q30KQ8 113 aa10.56□□□□□ -0.72
PTPRF-214ENST00000496043 DEGS2Q6QHC5 323 aa10.56□□□□□ -0.72
PTPRF-214ENST00000496043 WDR82Q6UXN9 313 aa10.56□□□□□ -0.72
PTPRF-214ENST00000496043 BRD3OSQ6XYD6 125 aa10.56□□□□□ -0.72
PTPRF-214ENST00000496043 SLC36A1Q7Z2H8 476 aa10.56□□□□□ -0.72
PTPRF-214ENST00000496043 OR5K1Q8NHB7 308 aa10.56□□□□□ -0.72
PTPRF-214ENST00000496043 OR5P3Q8WZ94 311 aa10.56□□□□□ -0.72
PTPRF-214ENST00000496043 ITFG2Q969R8 447 aa10.56□□□□□ -0.72
PTPRF-214ENST00000496043 ITPKCQ96DU7 683 aa10.56□□□□□ -0.72
PTPRF-214ENST00000496043 RNF170Q96K19 258 aa10.56□□□□□ -0.72
PTPRF-214ENST00000496043 CCL13Q99616 98 aa10.56□□□□□ -0.72
PTPRF-214ENST00000496043 MROQ9BYG7 248 aa10.56□□□□□ -0.72
PTPRF-214ENST00000496043 TLNRD1Q9H1K6 362 aa10.56□□□□□ -0.72
PTPRF-214ENST00000496043 SMURF1Q9HCE7 757 aa10.56□□□□□ -0.72
PTPRF-214ENST00000496043 NOX4Q9NPH5 578 aa10.56□□□□□ -0.72
PTPRF-214ENST00000496043 H2AFY2Q9P0M6 372 aaPredicted RBP10.56□□□□□ -0.72
PTPRF-214ENST00000496043 PCDHGB1Q9Y5G3 927 aa10.56□□□□□ -0.72
PTPRF-214ENST00000496043 ANK2Q01484 3957 aa10.56□□□□□ -0.72
PTPRF-214ENST00000496043 CENPVL3A0A0U1RRI6 287 aa10.55□□□□□ -0.72
PTPRF-214ENST00000496043 TMEM210A6NLX4 147 aa10.55□□□□□ -0.72
PTPRF-214ENST00000496043 POM121CA8CG34 1229 aa10.55□□□□□ -0.72
PTPRF-214ENST00000496043 GPR37O15354 613 aa10.55□□□□□ -0.72
PTPRF-214ENST00000496043 NDUFB3O43676 98 aa10.55□□□□□ -0.72
PTPRF-214ENST00000496043 SFTPBP07988 381 aa10.55□□□□□ -0.72
PTPRF-214ENST00000496043 MMP9P14780 707 aa10.55□□□□□ -0.72
PTPRF-214ENST00000496043 ACKR3P25106 362 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms