RNA–Protein interactions for RNA: ENST00000495677.1

COL1A1-209, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 594 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-209ENST00000495677 PAICSP22234 425 aaKnown RBP10.87□□□□□ -0.67
COL1A1-209ENST00000495677 ANOS1P23352 680 aa10.87□□□□□ -0.67
COL1A1-209ENST00000495677 MSX2P35548 267 aaPredicted RBP10.87□□□□□ -0.67
COL1A1-209ENST00000495677 KRTAP10-11P60412 298 aa10.87□□□□□ -0.67
COL1A1-209ENST00000495677 SLC35A2P78381 396 aa10.87□□□□□ -0.67
COL1A1-209ENST00000495677 DGUOKQ16854 277 aa10.87□□□□□ -0.67
COL1A1-209ENST00000495677 ZBTB37Q5TC79 503 aa10.87□□□□□ -0.67
COL1A1-209ENST00000495677 VTCN1Q7Z7D3 282 aa10.87□□□□□ -0.67
COL1A1-209ENST00000495677 ANGPTL6Q8NI99 470 aa10.87□□□□□ -0.67
COL1A1-209ENST00000495677 RAB3IPQ96QF0 476 aaPredicted RBP10.87□□□□□ -0.67
COL1A1-209ENST00000495677 NMNAT3Q96T66 252 aa10.87□□□□□ -0.67
COL1A1-209ENST00000495677 PRSS22Q9GZN4 317 aa10.87□□□□□ -0.67
COL1A1-209ENST00000495677 TMBIM4Q9HC24 238 aa10.87□□□□□ -0.67
COL1A1-209ENST00000495677 MRPL22Q9NWU5 206 aaKnown RBP10.87□□□□□ -0.67
COL1A1-209ENST00000495677 TRBV23-1A0A0A0MS06 115 aa10.86□□□□□ -0.67
COL1A1-209ENST00000495677 A0A1W2PRQ8 180 aa10.86□□□□□ -0.67
COL1A1-209ENST00000495677 CDIPTO14735 213 aa10.86□□□□□ -0.67
COL1A1-209ENST00000495677 GLCEO94923 617 aa10.86□□□□□ -0.67
COL1A1-209ENST00000495677 ACAA1P09110 424 aaPredicted RBP10.86□□□□□ -0.67
COL1A1-209ENST00000495677 NHLRC4P0CG21 123 aaPredicted RBP10.86□□□□□ -0.67
COL1A1-209ENST00000495677 SELLP14151 372 aa10.86□□□□□ -0.67
COL1A1-209ENST00000495677 MXRA7P84157 204 aa10.86□□□□□ -0.67
COL1A1-209ENST00000495677 SPIBQ01892 262 aa10.86□□□□□ -0.67
COL1A1-209ENST00000495677 DCTN2Q13561 401 aaKnown RBP10.86□□□□□ -0.67
COL1A1-209ENST00000495677 DGCR6Q14129 220 aa10.86□□□□□ -0.67
COL1A1-209ENST00000495677 HABP2Q14520 560 aaPredicted RBP10.86□□□□□ -0.67
COL1A1-209ENST00000495677 CNN3Q15417 329 aaKnown RBP10.86□□□□□ -0.67
COL1A1-209ENST00000495677 FAM76BQ5HYJ3 339 aa10.86□□□□□ -0.67
COL1A1-209ENST00000495677 SMARCD3Q6STE5 483 aa10.86□□□□□ -0.67
COL1A1-209ENST00000495677 CBLL1Q75N03 491 aa10.86□□□□□ -0.67
COL1A1-209ENST00000495677 OR2T12Q8NG77 320 aa10.86□□□□□ -0.67
COL1A1-209ENST00000495677 OR5T2Q8NGG2 359 aa10.86□□□□□ -0.67
COL1A1-209ENST00000495677 OR5K1Q8NHB7 308 aa10.86□□□□□ -0.67
COL1A1-209ENST00000495677 RSRC1Q96IZ7 334 aaKnown RBP10.86□□□□□ -0.67
COL1A1-209ENST00000495677 ERMAPQ96PL5 475 aaPredicted RBP10.86□□□□□ -0.67
COL1A1-209ENST00000495677 GAFA1Q96PS6 74 aa10.86□□□□□ -0.67
COL1A1-209ENST00000495677 NKX3-1Q99801 234 aaPredicted RBP10.86□□□□□ -0.67
COL1A1-209ENST00000495677 HEXA-AS1Q9H8Q6 139 aa10.86□□□□□ -0.67
COL1A1-209ENST00000495677 TCF19Q9Y242 345 aa10.86□□□□□ -0.67
COL1A1-209ENST00000495677 A0A1W2PQ09 198 aa10.85□□□□□ -0.67
COL1A1-209ENST00000495677 NKX6-3A6NJ46 265 aa10.85□□□□□ -0.67
COL1A1-209ENST00000495677 E9PQ18 207 aa10.85□□□□□ -0.67
COL1A1-209ENST00000495677 H0YAE9 185 aa10.85□□□□□ -0.67
COL1A1-209ENST00000495677 ANGPTL7O43827 346 aa10.85□□□□□ -0.67
COL1A1-209ENST00000495677 IDH3BO43837 385 aa10.85□□□□□ -0.67
COL1A1-209ENST00000495677 TROVE2P10155 538 aaKnown RBP eCLIP10.85□□□□□ -0.67
COL1A1-209ENST00000495677 HIST1H1CP16403 213 aaKnown RBP10.85□□□□□ -0.67
COL1A1-209ENST00000495677 BMXP51813 675 aa10.85□□□□□ -0.67
COL1A1-209ENST00000495677 CSNK2BP67870 215 aa10.85□□□□□ -0.67
COL1A1-209ENST00000495677 FAM3AP98173 230 aa10.85□□□□□ -0.67
COL1A1-209ENST00000495677 IFI44LQ53G44 452 aa10.85□□□□□ -0.67
COL1A1-209ENST00000495677 C11orf42Q8N5U0 333 aa10.85□□□□□ -0.67
COL1A1-209ENST00000495677 OR4C15Q8NGM1 316 aa10.85□□□□□ -0.67
COL1A1-209ENST00000495677 KCNJ15Q99712 375 aa10.85□□□□□ -0.67
COL1A1-209ENST00000495677 RPRD1BQ9NQG5 326 aaKnown RBP10.85□□□□□ -0.67
COL1A1-209ENST00000495677 MRGBPQ9NV56 204 aa10.85□□□□□ -0.67
COL1A1-209ENST00000495677 ZNF391Q9UJN7 358 aa10.85□□□□□ -0.67
COL1A1-209ENST00000495677 PITPNC1Q9UKF7 332 aa10.85□□□□□ -0.67
COL1A1-209ENST00000495677 LRP12Q9Y561 859 aa10.85□□□□□ -0.67
COL1A1-209ENST00000495677 OR6C68A6NDL8 312 aa10.84□□□□□ -0.67
COL1A1-209ENST00000495677 A6NDX4 124 aa10.84□□□□□ -0.67
COL1A1-209ENST00000495677 UNC119BA6NIH7 251 aa10.84□□□□□ -0.67
COL1A1-209ENST00000495677 BBIP1A8MTZ0 92 aa10.84□□□□□ -0.67
COL1A1-209ENST00000495677 C3orf84H3BNL1 204 aa10.84□□□□□ -0.67
COL1A1-209ENST00000495677 HLA-DQA2P01906 255 aa10.84□□□□□ -0.67
COL1A1-209ENST00000495677 ZNF823P16415 610 aa10.84□□□□□ -0.67
COL1A1-209ENST00000495677 NDUFB7P17568 137 aa10.84□□□□□ -0.67
COL1A1-209ENST00000495677 SNCBQ16143 134 aa10.84□□□□□ -0.67
COL1A1-209ENST00000495677 SLC16A9Q7RTY1 509 aa10.84□□□□□ -0.67
COL1A1-209ENST00000495677 CYP4Z1Q86W10 505 aa10.84□□□□□ -0.67
COL1A1-209ENST00000495677 ZDHHC21Q8IVQ6 265 aa10.84□□□□□ -0.67
COL1A1-209ENST00000495677 MKXQ8IYA7 352 aa10.84□□□□□ -0.67
COL1A1-209ENST00000495677 OR4K13Q8NH42 304 aa10.84□□□□□ -0.67
COL1A1-209ENST00000495677 GPR61Q9BZJ8 451 aa10.84□□□□□ -0.67
COL1A1-209ENST00000495677 WDR13Q9H1Z4 485 aa10.84□□□□□ -0.67
COL1A1-209ENST00000495677 KRCC1Q9NPI7 259 aaPredicted RBP10.84□□□□□ -0.67
COL1A1-209ENST00000495677 AP3M1Q9Y2T2 418 aa10.84□□□□□ -0.67
COL1A1-209ENST00000495677 ENPP4Q9Y6X5 453 aa10.84□□□□□ -0.67
COL1A1-209ENST00000495677 TMEM210A6NLX4 147 aa10.83□□□□□ -0.68
COL1A1-209ENST00000495677 PEX14O75381 377 aa10.83□□□□□ -0.68
COL1A1-209ENST00000495677 ALDOBP05062 364 aa10.83□□□□□ -0.68
COL1A1-209ENST00000495677 H1F0P07305 194 aaKnown RBP10.83□□□□□ -0.68
COL1A1-209ENST00000495677 PF4V1P10720 104 aa10.83□□□□□ -0.68
COL1A1-209ENST00000495677 CFL1P23528 166 aaKnown RBP10.83□□□□□ -0.68
COL1A1-209ENST00000495677 PAX6P26367 422 aa10.83□□□□□ -0.68
COL1A1-209ENST00000495677 POU1F1P28069 291 aa10.83□□□□□ -0.68
COL1A1-209ENST00000495677 SLC6A6P31641 620 aa10.83□□□□□ -0.68
COL1A1-209ENST00000495677 DYNLT3P51808 116 aa10.83□□□□□ -0.68
COL1A1-209ENST00000495677 SLC7A2P52569 658 aa10.83□□□□□ -0.68
COL1A1-209ENST00000495677 LGALS4P56470 323 aa10.83□□□□□ -0.68
COL1A1-209ENST00000495677 IL5RAQ01344 420 aa10.83□□□□□ -0.68
COL1A1-209ENST00000495677 FKBP9P1Q75LS8 142 aa10.83□□□□□ -0.68
COL1A1-209ENST00000495677 LNX2Q8N448 690 aa10.83□□□□□ -0.68
COL1A1-209ENST00000495677 CSNK2A3Q8NEV1 391 aa10.83□□□□□ -0.68
COL1A1-209ENST00000495677 OR5AU1Q8NGC0 362 aa10.83□□□□□ -0.68
COL1A1-209ENST00000495677 SGK3Q96BR1 496 aa10.83□□□□□ -0.68
COL1A1-209ENST00000495677 MALSU1Q96EH3 234 aa10.83□□□□□ -0.68
COL1A1-209ENST00000495677 SIKE1Q9BRV8 207 aa10.83□□□□□ -0.68
COL1A1-209ENST00000495677 TMEM120AQ9BXJ8 343 aa10.83□□□□□ -0.68
COL1A1-209ENST00000495677 SNTG1Q9NSN8 517 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms