RNA–Protein interactions for RNA: ENST00000495071.6

SUPT20H-222, Transcript of SPT20 homolog, SAGA complex component, human

TSL 5

Gene SUPT20H, Length 3,669 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SUPT20H-222	ENST00000495071		F5H5K5	113 aa		11.88	□□□□□ -0.51
SUPT20H-222	ENST00000495071	MED6	O75586	246 aa		11.88	□□□□□ -0.51
SUPT20H-222	ENST00000495071	RAD51D	O75771	328 aa		11.88	□□□□□ -0.51
SUPT20H-222	ENST00000495071	ADCYAP1	P18509	176 aa		11.88	□□□□□ -0.51
SUPT20H-222	ENST00000495071	RBMX	P38159	391 aa	Known RBP	11.88	□□□□□ -0.51
SUPT20H-222	ENST00000495071	D2HGDH	Q8N465	521 aa		11.88	□□□□□ -0.51
SUPT20H-222	ENST00000495071	OR6S1	Q8NH40	331 aa		11.88	□□□□□ -0.51
SUPT20H-222	ENST00000495071	MMP26	Q9NRE1	261 aa		11.88	□□□□□ -0.51
SUPT20H-222	ENST00000495071	ABCA7	Q8IZY2	2146 aa		11.87	□□□□□ -0.51
SUPT20H-222	ENST00000495071	FGF16	O43320	207 aa		11.87	□□□□□ -0.51
SUPT20H-222	ENST00000495071	QDPR	P09417	244 aa		11.87	□□□□□ -0.51
SUPT20H-222	ENST00000495071	LBX1	P52954	281 aa		11.87	□□□□□ -0.51
SUPT20H-222	ENST00000495071	EIF5A	P63241	154 aa	Known RBP	11.87	□□□□□ -0.51
SUPT20H-222	ENST00000495071	ANKRD55	Q3KP44	614 aa		11.87	□□□□□ -0.51
SUPT20H-222	ENST00000495071	SYT13	Q7L8C5	426 aa		11.87	□□□□□ -0.51
SUPT20H-222	ENST00000495071	OR5AS1	Q8N127	324 aa		11.87	□□□□□ -0.51
SUPT20H-222	ENST00000495071	ATG2A	Q2TAZ0	1938 aa		11.87	□□□□□ -0.51
SUPT20H-222	ENST00000495071		A0A1W2PR77	199 aa		11.87	□□□□□ -0.51
SUPT20H-222	ENST00000495071	DBX1	A6NMT0	343 aa		11.87	□□□□□ -0.51
SUPT20H-222	ENST00000495071		F8VVB4	439 aa		11.87	□□□□□ -0.51
SUPT20H-222	ENST00000495071		F8VWA3	439 aa		11.87	□□□□□ -0.51
SUPT20H-222	ENST00000495071		H3BMH7	237 aa		11.87	□□□□□ -0.51
SUPT20H-222	ENST00000495071	FPR2	P25090	351 aa		11.87	□□□□□ -0.51
SUPT20H-222	ENST00000495071	SUMO3	P55854	103 aa	Predicted RBP	11.87	□□□□□ -0.51
SUPT20H-222	ENST00000495071	TMEM50B	P56557	158 aa		11.87	□□□□□ -0.51
SUPT20H-222	ENST00000495071	NAAA	Q02083	359 aa		11.87	□□□□□ -0.51
SUPT20H-222	ENST00000495071	SMCO1	Q147U7	214 aa		11.87	□□□□□ -0.51
SUPT20H-222	ENST00000495071	VAX1	Q5SQQ9	334 aa		11.87	□□□□□ -0.51
SUPT20H-222	ENST00000495071	TMEM230	Q96A57	120 aa		11.87	□□□□□ -0.51
SUPT20H-222	ENST00000495071	OR10C1	Q96KK4	312 aa		11.87	□□□□□ -0.51
SUPT20H-222	ENST00000495071	RAB33B	Q9H082	229 aa		11.87	□□□□□ -0.51
SUPT20H-222	ENST00000495071	UQCC1	Q9NVA1	299 aa		11.87	□□□□□ -0.51
SUPT20H-222	ENST00000495071	STMND1	H3BQB6	276 aa		11.87	□□□□□ -0.51
SUPT20H-222	ENST00000495071	LRP3	O75074	770 aa		11.87	□□□□□ -0.51
SUPT20H-222	ENST00000495071	SCGB1D2	O95969	90 aa		11.87	□□□□□ -0.51
SUPT20H-222	ENST00000495071	CFHR1	Q03591	330 aa		11.87	□□□□□ -0.51
SUPT20H-222	ENST00000495071	PJVK	Q0ZLH3	352 aa		11.87	□□□□□ -0.51
SUPT20H-222	ENST00000495071	PLPP5	Q8NEB5	264 aa		11.87	□□□□□ -0.51
SUPT20H-222	ENST00000495071	C2orf50	Q96LR7	162 aa		11.87	□□□□□ -0.51
SUPT20H-222	ENST00000495071	RHOF	Q9HBH0	211 aa		11.87	□□□□□ -0.51
SUPT20H-222	ENST00000495071	ZNF319	Q9P2F9	582 aa		11.87	□□□□□ -0.51
SUPT20H-222	ENST00000495071	CBX5	P45973	191 aa		11.86	□□□□□ -0.51
SUPT20H-222	ENST00000495071	NPBWR1	P48145	328 aa		11.86	□□□□□ -0.51
SUPT20H-222	ENST00000495071	TAS2R46	P59540	309 aa		11.86	□□□□□ -0.51
SUPT20H-222	ENST00000495071	TMEM176B	Q3YBM2	270 aa	Predicted RBP	11.86	□□□□□ -0.51
SUPT20H-222	ENST00000495071	FAM76B	Q5HYJ3	339 aa		11.86	□□□□□ -0.51
SUPT20H-222	ENST00000495071	DOK3	Q7L591	496 aa		11.86	□□□□□ -0.51
SUPT20H-222	ENST00000495071	APCDD1L	Q8NCL9	501 aa		11.86	□□□□□ -0.51
SUPT20H-222	ENST00000495071	LIN37	Q96GY3	246 aa	Predicted RBP	11.86	□□□□□ -0.51
SUPT20H-222	ENST00000495071	SMIM3	Q9BZL3	60 aa		11.86	□□□□□ -0.51
SUPT20H-222	ENST00000495071	TAF9B	Q9HBM6	251 aa		11.86	□□□□□ -0.51
SUPT20H-222	ENST00000495071	B3GAT1	Q9P2W7	334 aa		11.86	□□□□□ -0.51
SUPT20H-222	ENST00000495071	LPAR3	Q9UBY5	353 aa		11.86	□□□□□ -0.51
SUPT20H-222	ENST00000495071	SRPK3	Q9UPE1	567 aa		11.86	□□□□□ -0.51
SUPT20H-222	ENST00000495071	NPIPB13	A6NJU9	1138 aa		11.86	□□□□□ -0.51
SUPT20H-222	ENST00000495071	NPIPB4	C9JG80	1138 aa		11.86	□□□□□ -0.51
SUPT20H-222	ENST00000495071	TLX3	O43711	291 aa	Predicted RBP	11.86	□□□□□ -0.51
SUPT20H-222	ENST00000495071	PDZK1IP1	Q13113	114 aa		11.86	□□□□□ -0.51
SUPT20H-222	ENST00000495071	PNLIPRP3	Q17RR3	467 aa		11.86	□□□□□ -0.51
SUPT20H-222	ENST00000495071	SWI5	Q1ZZU3	235 aa		11.86	□□□□□ -0.51
SUPT20H-222	ENST00000495071	IAH1	Q2TAA2	248 aa	Predicted RBP	11.86	□□□□□ -0.51
SUPT20H-222	ENST00000495071	LCN10	Q6JVE6	187 aa		11.86	□□□□□ -0.51
SUPT20H-222	ENST00000495071	OR10G3	Q8NGC4	313 aa		11.86	□□□□□ -0.51
SUPT20H-222	ENST00000495071	OR13G1	Q8NGZ3	307 aa		11.86	□□□□□ -0.51
SUPT20H-222	ENST00000495071	C2CD4C	Q8TF44	421 aa		11.86	□□□□□ -0.51
SUPT20H-222	ENST00000495071	MRGPRX4	Q96LA9	322 aa		11.86	□□□□□ -0.51
SUPT20H-222	ENST00000495071	ZNF160	Q9HCG1	818 aa		11.86	□□□□□ -0.51
SUPT20H-222	ENST00000495071	CYTL1	Q9NRR1	136 aa		11.86	□□□□□ -0.51
SUPT20H-222	ENST00000495071	MBTPS2	O43462	519 aa		11.85	□□□□□ -0.51
SUPT20H-222	ENST00000495071	LTBR	P36941	435 aa		11.85	□□□□□ -0.51
SUPT20H-222	ENST00000495071	CHAF1B	Q13112	559 aa		11.85	□□□□□ -0.51
SUPT20H-222	ENST00000495071	RPL7L1	Q6DKI1	246 aa	Known RBP	11.85	□□□□□ -0.51
SUPT20H-222	ENST00000495071	DRAM2	Q6UX65	266 aa		11.85	□□□□□ -0.51
SUPT20H-222	ENST00000495071		Q7L0L9	218 aa		11.85	□□□□□ -0.51
SUPT20H-222	ENST00000495071	ANKRD37	Q7Z713	158 aa		11.85	□□□□□ -0.51
SUPT20H-222	ENST00000495071	C17orf82	Q86X59	251 aa	Predicted RBP	11.85	□□□□□ -0.51
SUPT20H-222	ENST00000495071	ZFP82	Q8N141	532 aa		11.85	□□□□□ -0.51
SUPT20H-222	ENST00000495071	OR4A4P	Q8NGN8	299 aa		11.85	□□□□□ -0.51
SUPT20H-222	ENST00000495071	PHF3	Q92576	2039 aa	Known RBP	11.85	□□□□□ -0.51
SUPT20H-222	ENST00000495071	NUDT19	A8MXV4	375 aa		11.85	□□□□□ -0.51
SUPT20H-222	ENST00000495071	NDUFA2	O43678	99 aa		11.85	□□□□□ -0.51
SUPT20H-222	ENST00000495071	EFNA2	O43921	213 aa		11.85	□□□□□ -0.51
SUPT20H-222	ENST00000495071	PIAS2	O75928	621 aa		11.85	□□□□□ -0.51
SUPT20H-222	ENST00000495071	GABRR1	P24046	479 aa		11.85	□□□□□ -0.51
SUPT20H-222	ENST00000495071	OR5L2	Q8NGL0	311 aa		11.85	□□□□□ -0.51
SUPT20H-222	ENST00000495071	ZNF501	Q96CX3	271 aa	Predicted RBP	11.85	□□□□□ -0.51
SUPT20H-222	ENST00000495071	NUDT16L1	Q9BRJ7	211 aa	Known RBP	11.85	□□□□□ -0.51
SUPT20H-222	ENST00000495071	MRPL13	Q9BYD1	178 aa	Known RBP	11.85	□□□□□ -0.51
SUPT20H-222	ENST00000495071	CA14	Q9ULX7	337 aa		11.85	□□□□□ -0.51
SUPT20H-222	ENST00000495071	WIF1	Q9Y5W5	379 aa		11.85	□□□□□ -0.51
SUPT20H-222	ENST00000495071	TRBV6-7	A0A0A0MS04	114 aa		11.85	□□□□□ -0.51
SUPT20H-222	ENST00000495071	PGA4	P0DJD7	388 aa		11.85	□□□□□ -0.51
SUPT20H-222	ENST00000495071	PGA3	P0DJD8	388 aa		11.85	□□□□□ -0.51
SUPT20H-222	ENST00000495071	CD79A	P11912	226 aa		11.85	□□□□□ -0.51
SUPT20H-222	ENST00000495071	FCGR2A	P12318	317 aa		11.85	□□□□□ -0.51
SUPT20H-222	ENST00000495071	ADH6	P28332	368 aa		11.85	□□□□□ -0.51
SUPT20H-222	ENST00000495071	KISS1	Q15726	138 aa		11.85	□□□□□ -0.51
SUPT20H-222	ENST00000495071	HFE	Q30201	348 aa		11.85	□□□□□ -0.51
SUPT20H-222	ENST00000495071	NKAIN1	Q4KMZ8	207 aa		11.85	□□□□□ -0.51
SUPT20H-222	ENST00000495071	OGFOD3	Q6PK18	319 aa		11.85	□□□□□ -0.51

Retrieved 100 of 20,778 RNA–protein pairs in 36 ms