RNA–Protein interactions for RNA: ENST00000494667.5

PRKD3-210, Transcript of protein kinase D3, humanhuman

TSL 1 (best)

Gene PRKD3, Length 4,326 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-210ENST00000494667 HBE1P02100 147 aa4.26□□□□□ -1.73
PRKD3-210ENST00000494667 PGA4P0DJD7 388 aa4.26□□□□□ -1.73
PRKD3-210ENST00000494667 PGA5P0DJD9 388 aa4.26□□□□□ -1.73
PRKD3-210ENST00000494667 CSNK2A2P19784 350 aaPredicted RBP4.26□□□□□ -1.73
PRKD3-210ENST00000494667 PSEN2P49810 448 aa4.26□□□□□ -1.73
PRKD3-210ENST00000494667 PRPS1P60891 318 aa4.26□□□□□ -1.73
PRKD3-210ENST00000494667 RND3P61587 244 aa4.26□□□□□ -1.73
PRKD3-210ENST00000494667 FAM90A2PQ658T7 463 aa4.26□□□□□ -1.73
PRKD3-210ENST00000494667 CBLN3Q6UW01 205 aa4.26□□□□□ -1.73
PRKD3-210ENST00000494667 ZNF765Q7L2R6 523 aa4.26□□□□□ -1.73
PRKD3-210ENST00000494667 NUDT10Q8NFP7 164 aa4.26□□□□□ -1.73
PRKD3-210ENST00000494667 OR4D6Q8NGJ1 314 aa4.26□□□□□ -1.73
PRKD3-210ENST00000494667 CASTOR1Q8WTX7 329 aa4.26□□□□□ -1.73
PRKD3-210ENST00000494667 C16orf58Q96GQ5 468 aa4.26□□□□□ -1.73
PRKD3-210ENST00000494667 TNFRSF13CQ96RJ3 184 aa4.26□□□□□ -1.73
PRKD3-210ENST00000494667 TPSD1Q9BZJ3 242 aa4.26□□□□□ -1.73
PRKD3-210ENST00000494667 TRIM2Q9C040 744 aa4.26□□□□□ -1.73
PRKD3-210ENST00000494667 WDR76Q9H967 626 aa4.26□□□□□ -1.73
PRKD3-210ENST00000494667 WFDC1Q9HC57 220 aa4.26□□□□□ -1.73
PRKD3-210ENST00000494667 GPR84Q9NQS5 396 aa4.26□□□□□ -1.73
PRKD3-210ENST00000494667 CBLN4Q9NTU7 201 aa4.26□□□□□ -1.73
PRKD3-210ENST00000494667 C1orf123Q9NWV4 160 aa4.26□□□□□ -1.73
PRKD3-210ENST00000494667 FLRT3Q9NZU0 649 aa4.26□□□□□ -1.73
PRKD3-210ENST00000494667 IL17BQ9UHF5 180 aa4.26□□□□□ -1.73
PRKD3-210ENST00000494667 NAGKQ9UJ70 344 aa4.26□□□□□ -1.73
PRKD3-210ENST00000494667 HSF4Q9ULV5 492 aa4.26□□□□□ -1.73
PRKD3-210ENST00000494667 A0A087WV62 115 aa4.25□□□□□ -1.73
PRKD3-210ENST00000494667 SIAH2O43255 324 aa4.25□□□□□ -1.73
PRKD3-210ENST00000494667 IFNA21P01568 189 aa4.25□□□□□ -1.73
PRKD3-210ENST00000494667 SLC35G4P0C7Q5 338 aa4.25□□□□□ -1.73
PRKD3-210ENST00000494667 CORO1AP31146 461 aaKnown RBP4.25□□□□□ -1.73
PRKD3-210ENST00000494667 CDK3Q00526 305 aa4.25□□□□□ -1.73
PRKD3-210ENST00000494667 COL10A1Q03692 680 aa4.25□□□□□ -1.73
PRKD3-210ENST00000494667 TRAPPC6BQ86SZ2 158 aa4.25□□□□□ -1.73
PRKD3-210ENST00000494667 PRSS58Q8IYP2 241 aa4.25□□□□□ -1.73
PRKD3-210ENST00000494667 SKA2Q8WVK7 121 aaPredicted RBP4.25□□□□□ -1.73
PRKD3-210ENST00000494667 GLYATL1Q969I3 302 aa4.25□□□□□ -1.73
PRKD3-210ENST00000494667 MOB3AQ96BX8 217 aa4.25□□□□□ -1.73
PRKD3-210ENST00000494667 SDF2Q99470 211 aa4.25□□□□□ -1.73
PRKD3-210ENST00000494667 ALG12Q9BV10 488 aa4.25□□□□□ -1.73
PRKD3-210ENST00000494667 SDF2L1Q9HCN8 221 aa4.25□□□□□ -1.73
PRKD3-210ENST00000494667 MRPL27Q9P0M9 148 aaKnown RBP4.25□□□□□ -1.73
PRKD3-210ENST00000494667 KLHDC2Q9Y2U9 406 aa4.25□□□□□ -1.73
PRKD3-210ENST00000494667 CLDN16Q9Y5I7 305 aa4.25□□□□□ -1.73
PRKD3-210ENST00000494667 COLEC10Q9Y6Z7 277 aa4.25□□□□□ -1.73
PRKD3-210ENST00000494667 SCN10AQ9Y5Y9 1956 aa4.25□□□□□ -1.73
PRKD3-210ENST00000494667 OR2AG2A6NM03 316 aa4.25□□□□□ -1.73
PRKD3-210ENST00000494667 SLC38A8A6NNN8 435 aa4.25□□□□□ -1.73
PRKD3-210ENST00000494667 ZNF727A8MUV8 499 aa4.25□□□□□ -1.73
PRKD3-210ENST00000494667 TMEM14DPA8MWL7 114 aa4.25□□□□□ -1.73
PRKD3-210ENST00000494667 F6UZH7 168 aa4.25□□□□□ -1.73
PRKD3-210ENST00000494667 NME2P1O60361 137 aa4.25□□□□□ -1.73
PRKD3-210ENST00000494667 PITX3O75364 302 aa4.25□□□□□ -1.73
PRKD3-210ENST00000494667 MTX2O75431 263 aa4.25□□□□□ -1.73
PRKD3-210ENST00000494667 ERAL1O75616 437 aaKnown RBP4.25□□□□□ -1.73
PRKD3-210ENST00000494667 LCATP04180 440 aa4.25□□□□□ -1.73
PRKD3-210ENST00000494667 ZNF43P17038 809 aa4.25□□□□□ -1.73
PRKD3-210ENST00000494667 FUT1P19526 365 aa4.25□□□□□ -1.73
PRKD3-210ENST00000494667 HSD11B1P28845 292 aa4.25□□□□□ -1.73
PRKD3-210ENST00000494667 NAA10P41227 235 aaPredicted RBP4.25□□□□□ -1.73
PRKD3-210ENST00000494667 ADCYAP1R1P41586 468 aa4.25□□□□□ -1.73
PRKD3-210ENST00000494667 RHOGP84095 191 aa4.25□□□□□ -1.73
PRKD3-210ENST00000494667 DUSP2Q05923 314 aa4.25□□□□□ -1.73
PRKD3-210ENST00000494667 SGCGQ13326 291 aa4.25□□□□□ -1.73
PRKD3-210ENST00000494667 UBE2V1Q13404 147 aa4.25□□□□□ -1.73
PRKD3-210ENST00000494667 TRA2AQ13595 282 aaKnown RBP eCLIP4.25□□□□□ -1.73
PRKD3-210ENST00000494667 FAM189A2Q15884 450 aa4.25□□□□□ -1.73
PRKD3-210ENST00000494667 TAF9Q16594 264 aa4.25□□□□□ -1.73
PRKD3-210ENST00000494667 ATP6V1FQ16864 119 aa4.25□□□□□ -1.73
PRKD3-210ENST00000494667 LRRC73Q5JTD7 316 aa4.25□□□□□ -1.73
PRKD3-210ENST00000494667 ARMC6Q6NXE6 501 aa4.25□□□□□ -1.73
PRKD3-210ENST00000494667 ZNF793Q6ZN11 406 aa4.25□□□□□ -1.73
PRKD3-210ENST00000494667 KCTD9Q7L273 389 aa4.25□□□□□ -1.73
PRKD3-210ENST00000494667 OLIG3Q7RTU3 272 aa4.25□□□□□ -1.73
PRKD3-210ENST00000494667 SZRD1Q7Z422 152 aa4.25□□□□□ -1.73
PRKD3-210ENST00000494667 TAF8Q7Z7C8 310 aa4.25□□□□□ -1.73
PRKD3-210ENST00000494667 CISD2Q8N5K1 135 aaKnown RBP4.25□□□□□ -1.73
PRKD3-210ENST00000494667 ZNF740Q8NDX6 193 aa4.25□□□□□ -1.73
PRKD3-210ENST00000494667 FAM46BQ96A09 425 aa4.25□□□□□ -1.73
PRKD3-210ENST00000494667 CHODLQ9H9P2 273 aa4.25□□□□□ -1.73
PRKD3-210ENST00000494667 DNAJC4Q9NNZ3 241 aa4.25□□□□□ -1.73
PRKD3-210ENST00000494667 OR2S2Q9NQN1 319 aa4.25□□□□□ -1.73
PRKD3-210ENST00000494667 FUT9Q9Y231 359 aa4.25□□□□□ -1.73
PRKD3-210ENST00000494667 ATG2AQ2TAZ0 1938 aa4.25□□□□□ -1.73
PRKD3-210ENST00000494667 CPAMD8Q8IZJ3 1885 aa4.25□□□□□ -1.73
PRKD3-210ENST00000494667 SCN5AQ14524 2016 aa4.25□□□□□ -1.73
PRKD3-210ENST00000494667 TRAV27A0A087WT01 109 aa4.25□□□□□ -1.73
PRKD3-210ENST00000494667 C13orf42A0A1B0GVH6 325 aa4.25□□□□□ -1.73
PRKD3-210ENST00000494667 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.25□□□□□ -1.73
PRKD3-210ENST00000494667 FOXI3A8MTJ6 420 aaPredicted RBP4.25□□□□□ -1.73
PRKD3-210ENST00000494667 RTCAO00442 366 aaKnown RBP4.25□□□□□ -1.73
PRKD3-210ENST00000494667 GEMIN2O14893 280 aaKnown RBP4.25□□□□□ -1.73
PRKD3-210ENST00000494667 PIAS2O75928 621 aa4.25□□□□□ -1.73
PRKD3-210ENST00000494667 MAS1P04201 325 aa4.25□□□□□ -1.73
PRKD3-210ENST00000494667 NGFRP08138 427 aa4.25□□□□□ -1.73
PRKD3-210ENST00000494667 HRH1P35367 487 aa4.25□□□□□ -1.73
PRKD3-210ENST00000494667 CSNK1A1P48729 337 aa4.25□□□□□ -1.73
PRKD3-210ENST00000494667 SNRPD1P62314 119 aaKnown RBP4.25□□□□□ -1.73
PRKD3-210ENST00000494667 HIST1H3AP68431 136 aa4.25□□□□□ -1.73
PRKD3-210ENST00000494667 LCN2P80188 198 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms