RNA–Protein interactions for RNA: ENST00000494047.5

RFC4-214, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-214ENST00000494047 OR2I1PQ8NGU4 316 aa10.17□□□□□ -0.78
RFC4-214ENST00000494047 NAT6Q93015 286 aa10.17□□□□□ -0.78
RFC4-214ENST00000494047 PIK3IP1Q96FE7 263 aa10.17□□□□□ -0.78
RFC4-214ENST00000494047 TMEM41AQ96HV5 264 aa10.17□□□□□ -0.78
RFC4-214ENST00000494047 AQP10Q96PS8 301 aa10.17□□□□□ -0.78
RFC4-214ENST00000494047 NAA11Q9BSU3 229 aaPredicted RBP10.17□□□□□ -0.78
RFC4-214ENST00000494047 OR10A2Q9H208 303 aa10.17□□□□□ -0.78
RFC4-214ENST00000494047 C1orf123Q9NWV4 160 aa10.17□□□□□ -0.78
RFC4-214ENST00000494047 NDRG3Q9UGV2 375 aa10.17□□□□□ -0.78
RFC4-214ENST00000494047 GPR132Q9UNW8 380 aa10.17□□□□□ -0.78
RFC4-214ENST00000494047 C14orf166Q9Y224 244 aaKnown RBP10.17□□□□□ -0.78
RFC4-214ENST00000494047 KCNK7Q9Y2U2 307 aa10.17□□□□□ -0.78
RFC4-214ENST00000494047 PCDHGA1Q9Y5H4 931 aa10.17□□□□□ -0.78
RFC4-214ENST00000494047 KNTC1P50748 2209 aa10.17□□□□□ -0.78
RFC4-214ENST00000494047 A0A087WV48 116 aa10.16□□□□□ -0.78
RFC4-214ENST00000494047 TRBV11-1A0A0K0K1C0 115 aa10.16□□□□□ -0.78
RFC4-214ENST00000494047 C5orf51A6NDU8 294 aa10.16□□□□□ -0.78
RFC4-214ENST00000494047 SULT2B1O00204 365 aa10.16□□□□□ -0.78
RFC4-214ENST00000494047 ADAM10O14672 748 aa10.16□□□□□ -0.78
RFC4-214ENST00000494047 RRP8O43159 456 aaKnown RBP10.16□□□□□ -0.78
RFC4-214ENST00000494047 TPD52L2O43399 206 aaKnown RBP10.16□□□□□ -0.78
RFC4-214ENST00000494047 SNAPINO95295 136 aa10.16□□□□□ -0.78
RFC4-214ENST00000494047 HCKP08631 526 aa10.16□□□□□ -0.78
RFC4-214ENST00000494047 MSR1P21757 451 aa10.16□□□□□ -0.78
RFC4-214ENST00000494047 ZNF169Q14929 603 aaPredicted RBP10.16□□□□□ -0.78
RFC4-214ENST00000494047 HMGN3Q15651 99 aa10.16□□□□□ -0.78
RFC4-214ENST00000494047 EXT1Q16394 746 aa10.16□□□□□ -0.78
RFC4-214ENST00000494047 OPN5Q6U736 354 aa10.16□□□□□ -0.78
RFC4-214ENST00000494047 GLIPR1L1Q6UWM5 242 aa10.16□□□□□ -0.78
RFC4-214ENST00000494047 FOXL2NBQ6ZUU3 175 aa10.16□□□□□ -0.78
RFC4-214ENST00000494047 COX15Q7KZN9 410 aa10.16□□□□□ -0.78
RFC4-214ENST00000494047 SLC16A14Q7RTX9 510 aa10.16□□□□□ -0.78
RFC4-214ENST00000494047 CPEB2Q7Z5Q1 589 aaKnown RBP10.16□□□□□ -0.78
RFC4-214ENST00000494047 COMMD2Q86X83 199 aa10.16□□□□□ -0.78
RFC4-214ENST00000494047 LINC00346Q8IVM7 164 aa10.16□□□□□ -0.78
RFC4-214ENST00000494047 PAQR4Q8N4S7 273 aaPredicted RBP10.16□□□□□ -0.78
RFC4-214ENST00000494047 FAM89BQ8N5H3 189 aa10.16□□□□□ -0.78
RFC4-214ENST00000494047 OR52N4Q8NGI2 321 aa10.16□□□□□ -0.78
RFC4-214ENST00000494047 OR52H1Q8NGJ2 320 aa10.16□□□□□ -0.78
RFC4-214ENST00000494047 OR13C9Q8NGT0 318 aa10.16□□□□□ -0.78
RFC4-214ENST00000494047 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.16□□□□□ -0.78
RFC4-214ENST00000494047 SPSB1Q96BD6 273 aa10.16□□□□□ -0.78
RFC4-214ENST00000494047 SPACA9Q96E40 222 aaPredicted RBP10.16□□□□□ -0.78
RFC4-214ENST00000494047 MRPS24Q96EL2 167 aaKnown RBP10.16□□□□□ -0.78
RFC4-214ENST00000494047 GPER1Q99527 375 aa10.16□□□□□ -0.78
RFC4-214ENST00000494047 ZNF416Q9BWM5 594 aa10.16□□□□□ -0.78
RFC4-214ENST00000494047 TM2D1Q9BX74 207 aa10.16□□□□□ -0.78
RFC4-214ENST00000494047 NKX6-2Q9C056 277 aaPredicted RBP10.16□□□□□ -0.78
RFC4-214ENST00000494047 CHST6Q9GZX3 395 aa10.16□□□□□ -0.78
RFC4-214ENST00000494047 LPAR5Q9H1C0 372 aa10.16□□□□□ -0.78
RFC4-214ENST00000494047 NELFAQ9H3P2 528 aa10.16□□□□□ -0.78
RFC4-214ENST00000494047 BARX1Q9HBU1 254 aaPredicted RBP10.16□□□□□ -0.78
RFC4-214ENST00000494047 MMP26Q9NRE1 261 aa10.16□□□□□ -0.78
RFC4-214ENST00000494047 TMEM100Q9NV29 134 aa10.16□□□□□ -0.78
RFC4-214ENST00000494047 MYOTQ9UBF9 498 aa10.16□□□□□ -0.78
RFC4-214ENST00000494047 ARID1BQ8NFD5 2236 aaPredicted RBP10.16□□□□□ -0.78
RFC4-214ENST00000494047 ACACBO00763 2458 aa10.16□□□□□ -0.78
RFC4-214ENST00000494047 MFNGO00587 321 aa10.15□□□□□ -0.78
RFC4-214ENST00000494047 TRAF3IP2O43734 574 aaPredicted RBP10.15□□□□□ -0.78
RFC4-214ENST00000494047 RAD1O60671 282 aa10.15□□□□□ -0.78
RFC4-214ENST00000494047 DHRS3O75911 302 aa10.15□□□□□ -0.78
RFC4-214ENST00000494047 ATG12O94817 140 aa10.15□□□□□ -0.78
RFC4-214ENST00000494047 IGLV3-1P01715 115 aa10.15□□□□□ -0.78
RFC4-214ENST00000494047 APOC3P02656 99 aa10.15□□□□□ -0.78
RFC4-214ENST00000494047 GAPDHP04406 335 aaKnown RBP10.15□□□□□ -0.78
RFC4-214ENST00000494047 AMY2BP19961 511 aa10.15□□□□□ -0.78
RFC4-214ENST00000494047 EPHA8P29322 1005 aaPredicted RBP10.15□□□□□ -0.78
RFC4-214ENST00000494047 ZNF84P51523 738 aa10.15□□□□□ -0.78
RFC4-214ENST00000494047 FBXW4P57775 412 aa10.15□□□□□ -0.78
RFC4-214ENST00000494047 BLOC1S1P78537 153 aa10.15□□□□□ -0.78
RFC4-214ENST00000494047 FOXK1P85037 733 aa10.15□□□□□ -0.78
RFC4-214ENST00000494047 FMODQ06828 376 aa10.15□□□□□ -0.78
RFC4-214ENST00000494047 BTN1A1Q13410 526 aa10.15□□□□□ -0.78
RFC4-214ENST00000494047 CD163Q86VB7 1156 aa10.15□□□□□ -0.78
RFC4-214ENST00000494047 LHFPL1Q86WI0 220 aa10.15□□□□□ -0.78
RFC4-214ENST00000494047 COMMD1Q8N668 190 aa10.15□□□□□ -0.78
RFC4-214ENST00000494047 ZNF283Q8N7M2 679 aa10.15□□□□□ -0.78
RFC4-214ENST00000494047 FADS6Q8N9I5 356 aa10.15□□□□□ -0.78
RFC4-214ENST00000494047 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.15□□□□□ -0.78
RFC4-214ENST00000494047 SAP25Q8TEE9 199 aa10.15□□□□□ -0.78
RFC4-214ENST00000494047 DCUN1D4Q92564 292 aa10.15□□□□□ -0.78
RFC4-214ENST00000494047 SPTSSAQ969W0 71 aa10.15□□□□□ -0.78
RFC4-214ENST00000494047 ZNF524Q96C55 264 aa10.15□□□□□ -0.78
RFC4-214ENST00000494047 ADAT3Q96EY9 351 aaPredicted RBP10.15□□□□□ -0.78
RFC4-214ENST00000494047 ARL5BQ96KC2 179 aa10.15□□□□□ -0.78
RFC4-214ENST00000494047 C2orf50Q96LR7 162 aa10.15□□□□□ -0.78
RFC4-214ENST00000494047 SELENOIQ9C0D9 397 aa10.15□□□□□ -0.78
RFC4-214ENST00000494047 SLC22A11Q9NSA0 550 aa10.15□□□□□ -0.78
RFC4-214ENST00000494047 B3GAT1Q9P2W7 334 aa10.15□□□□□ -0.78
RFC4-214ENST00000494047 CARHSP1Q9Y2V2 147 aaKnown RBP10.15□□□□□ -0.78
RFC4-214ENST00000494047 FLVCR1Q9Y5Y0 555 aa10.15□□□□□ -0.78
RFC4-214ENST00000494047 LHFPL6Q9Y693 200 aa10.15□□□□□ -0.78
RFC4-214ENST00000494047 FAM25EA8MYX2 175 aa10.14□□□□□ -0.79
RFC4-214ENST00000494047 GMFGO60234 142 aa10.14□□□□□ -0.79
RFC4-214ENST00000494047 MPIG6BO95866 241 aa10.14□□□□□ -0.79
RFC4-214ENST00000494047 IFNA21P01568 189 aa10.14□□□□□ -0.79
RFC4-214ENST00000494047 HLA-DOBP13765 273 aa10.14□□□□□ -0.79
RFC4-214ENST00000494047 ATP1B3P54709 279 aa10.14□□□□□ -0.79
RFC4-214ENST00000494047 ZNF121P58317 390 aaPredicted RBP10.14□□□□□ -0.79
RFC4-214ENST00000494047 ARFRP1Q13795 201 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms