RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 SPRY4Q9C004 299 aa12.15□□□□□ -0.46
VCP-207ENST00000493886 P4HTMQ9NXG6 502 aa12.15□□□□□ -0.46
VCP-207ENST00000493886 NPIPA2E9PIF3 369 aa12.15□□□□□ -0.46
VCP-207ENST00000493886 NPIPA3F8WFD2 350 aa12.15□□□□□ -0.46
VCP-207ENST00000493886 CCSO14618 274 aa12.15□□□□□ -0.46
VCP-207ENST00000493886 TNFSF11O14788 317 aa12.15□□□□□ -0.46
VCP-207ENST00000493886 RER1O15258 196 aa12.15□□□□□ -0.46
VCP-207ENST00000493886 AMY2AP04746 511 aa12.15□□□□□ -0.46
VCP-207ENST00000493886 CSNK1A1P48729 337 aa12.15□□□□□ -0.46
VCP-207ENST00000493886 PRKXP51817 358 aa12.15□□□□□ -0.46
VCP-207ENST00000493886 MOGAT2Q3SYC2 334 aa12.15□□□□□ -0.46
VCP-207ENST00000493886 ACER2Q5QJU3 275 aa12.15□□□□□ -0.46
VCP-207ENST00000493886 H3F3CQ6NXT2 135 aa12.15□□□□□ -0.46
VCP-207ENST00000493886 NKAIN3Q8N8D7 197 aa12.15□□□□□ -0.46
VCP-207ENST00000493886 CLRN3Q8NCR9 226 aa12.15□□□□□ -0.46
VCP-207ENST00000493886 OR6N1Q8NGY5 312 aa12.15□□□□□ -0.46
VCP-207ENST00000493886 PNPLA2Q96AD5 504 aa12.15□□□□□ -0.46
VCP-207ENST00000493886 ZNF385AQ96PM9 386 aaKnown RBP12.15□□□□□ -0.46
VCP-207ENST00000493886 MLXQ9UH92 298 aa12.15□□□□□ -0.46
VCP-207ENST00000493886 WRBO00258 174 aa12.14□□□□□ -0.47
VCP-207ENST00000493886 SERPINA7P05543 415 aa12.14□□□□□ -0.47
VCP-207ENST00000493886 C4BPBP20851 252 aa12.14□□□□□ -0.47
VCP-207ENST00000493886 SRD5A2P31213 254 aa12.14□□□□□ -0.47
VCP-207ENST00000493886 TSC22D1Q15714 1073 aa12.14□□□□□ -0.47
VCP-207ENST00000493886 BEX5Q5H9J7 111 aa12.14□□□□□ -0.47
VCP-207ENST00000493886 FAM76BQ5HYJ3 339 aa12.14□□□□□ -0.47
VCP-207ENST00000493886 FAM74A1Q5RGS3 127 aa12.14□□□□□ -0.47
VCP-207ENST00000493886 LIN54Q6MZP7 749 aa12.14□□□□□ -0.47
VCP-207ENST00000493886 GSG1LQ6UXU4 331 aa12.14□□□□□ -0.47
VCP-207ENST00000493886 Q8NFD4 153 aa12.14□□□□□ -0.47
VCP-207ENST00000493886 OR4S1Q8NGB4 309 aa12.14□□□□□ -0.47
VCP-207ENST00000493886 OR9K2Q8NGE7 335 aa12.14□□□□□ -0.47
VCP-207ENST00000493886 LIN37Q96GY3 246 aaPredicted RBP12.14□□□□□ -0.47
VCP-207ENST00000493886 REG4Q9BYZ8 158 aa12.14□□□□□ -0.47
VCP-207ENST00000493886 MOB1AQ9H8S9 216 aa12.14□□□□□ -0.47
VCP-207ENST00000493886 PNRC2Q9NPJ4 139 aaKnown RBP12.14□□□□□ -0.47
VCP-207ENST00000493886 TMEM235A6NFC5 223 aa12.14□□□□□ -0.47
VCP-207ENST00000493886 MFSD2BA6NFX1 497 aa12.14□□□□□ -0.47
VCP-207ENST00000493886 CDX4O14627 284 aaPredicted RBP12.14□□□□□ -0.47
VCP-207ENST00000493886 BPNT1O95861 308 aa12.14□□□□□ -0.47
VCP-207ENST00000493886 NUP62P37198 522 aaPredicted RBP12.14□□□□□ -0.47
VCP-207ENST00000493886 DHODHQ02127 395 aa12.14□□□□□ -0.47
VCP-207ENST00000493886 C1orf100Q5SVJ3 147 aa12.14□□□□□ -0.47
VCP-207ENST00000493886 YRDCQ86U90 279 aaKnown RBP12.14□□□□□ -0.47
VCP-207ENST00000493886 LYPD6Q86Y78 171 aa12.14□□□□□ -0.47
VCP-207ENST00000493886 NAXDQ8IW45 347 aa12.14□□□□□ -0.47
VCP-207ENST00000493886 GABRG1Q8N1C3 465 aa12.14□□□□□ -0.47
VCP-207ENST00000493886 ACBD4Q8NC06 268 aa12.14□□□□□ -0.47
VCP-207ENST00000493886 AKR7LQ8NHP1 331 aa12.14□□□□□ -0.47
VCP-207ENST00000493886 FAM46BQ96A09 425 aa12.14□□□□□ -0.47
VCP-207ENST00000493886 ADAT3Q96EY9 351 aaPredicted RBP12.14□□□□□ -0.47
VCP-207ENST00000493886 PCSK5Q92824 1860 aa12.14□□□□□ -0.47
VCP-207ENST00000493886 GJE1A6NN92 205 aa12.14□□□□□ -0.47
VCP-207ENST00000493886 WDPCPO95876 746 aa12.14□□□□□ -0.47
VCP-207ENST00000493886 RLN2P04090 185 aa12.14□□□□□ -0.47
VCP-207ENST00000493886 B3GALT5-AS1P59052 145 aa12.14□□□□□ -0.47
VCP-207ENST00000493886 SPCS3P61009 180 aa12.14□□□□□ -0.47
VCP-207ENST00000493886 BAMBIQ13145 260 aa12.14□□□□□ -0.47
VCP-207ENST00000493886 IKZF1Q13422 519 aa12.14□□□□□ -0.47
VCP-207ENST00000493886 PHYHD1Q5SRE7 291 aa12.14□□□□□ -0.47
VCP-207ENST00000493886 ADGRE4PQ86SQ3 457 aa12.14□□□□□ -0.47
VCP-207ENST00000493886 CLEC1AQ8NC01 280 aa12.14□□□□□ -0.47
VCP-207ENST00000493886 OR1J2Q8NGS2 313 aa12.14□□□□□ -0.47
VCP-207ENST00000493886 OR51E1Q8TCB6 317 aa12.14□□□□□ -0.47
VCP-207ENST00000493886 TMEM54Q969K7 222 aa12.14□□□□□ -0.47
VCP-207ENST00000493886 FOXRED1Q96CU9 486 aaPredicted RBP12.14□□□□□ -0.47
VCP-207ENST00000493886 MICU1Q9BPX6 476 aa12.14□□□□□ -0.47
VCP-207ENST00000493886 ZNF251Q9BRH9 671 aa12.14□□□□□ -0.47
VCP-207ENST00000493886 MFFQ9GZY8 342 aa12.14□□□□□ -0.47
VCP-207ENST00000493886 FOXJ2Q9P0K8 574 aa12.14□□□□□ -0.47
VCP-207ENST00000493886 KIF25Q9UIL4 384 aa12.14□□□□□ -0.47
VCP-207ENST00000493886 A0A1B0GTI1 187 aa12.13□□□□□ -0.47
VCP-207ENST00000493886 A0A1W2PNU3 283 aaPredicted RBP12.13□□□□□ -0.47
VCP-207ENST00000493886 EIF3GO75821 320 aaKnown RBP eCLIP12.13□□□□□ -0.476e-7■■■■■ 42.9
VCP-207ENST00000493886 RAB3DO95716 219 aa12.13□□□□□ -0.47
VCP-207ENST00000493886 SLC2A1P11166 492 aa12.13□□□□□ -0.47
VCP-207ENST00000493886 PPP3CBP16298 524 aa12.13□□□□□ -0.47
VCP-207ENST00000493886 BDKRB2P30411 391 aa12.13□□□□□ -0.47
VCP-207ENST00000493886 ZNF121P58317 390 aaPredicted RBP12.13□□□□□ -0.47
VCP-207ENST00000493886 C10orf128Q5T292 105 aa12.13□□□□□ -0.47
VCP-207ENST00000493886 ZNF813Q6ZN06 617 aa12.13□□□□□ -0.47
VCP-207ENST00000493886 CD163Q86VB7 1156 aa12.13□□□□□ -0.47
VCP-207ENST00000493886 STPG2Q8N412 459 aa12.13□□□□□ -0.47
VCP-207ENST00000493886 OR14L1PQ8NHC6 308 aa12.13□□□□□ -0.47
VCP-207ENST00000493886 CMBLQ96DG6 245 aa12.13□□□□□ -0.47
VCP-207ENST00000493886 UTP23Q9BRU9 249 aaKnown RBP12.13□□□□□ -0.47
VCP-207ENST00000493886 SRXN1Q9BYN0 137 aa12.13□□□□□ -0.47
VCP-207ENST00000493886 GABRA1P14867 456 aa12.13□□□□□ -0.47
VCP-207ENST00000493886 GUCA1AP43080 201 aaPredicted RBP12.13□□□□□ -0.47
VCP-207ENST00000493886 BEST3Q8N1M1 668 aa12.13□□□□□ -0.47
VCP-207ENST00000493886 BOLLQ8N9W6 283 aaKnown RBP12.13□□□□□ -0.47
VCP-207ENST00000493886 OR4D6Q8NGJ1 314 aa12.13□□□□□ -0.47
VCP-207ENST00000493886 LURAP1Q96LR2 239 aa12.13□□□□□ -0.47
VCP-207ENST00000493886 FAM212BQ9NTI7 297 aaPredicted RBP12.13□□□□□ -0.47
VCP-207ENST00000493886 RHBDD3Q9Y3P4 386 aa12.13□□□□□ -0.47
VCP-207ENST00000493886 R4GN57 208 aa12.13□□□□□ -0.47
VCP-207ENST00000493886 NCOA6Q14686 2063 aaPredicted RBP12.12□□□□□ -0.47
VCP-207ENST00000493886 TMEM82A0PJX8 343 aa12.12□□□□□ -0.47
VCP-207ENST00000493886 AVPR2P30518 371 aa12.12□□□□□ -0.47
VCP-207ENST00000493886 LSM6P62312 80 aaKnown RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms