RNA–Protein interactions for RNA: ENST00000493682.6

COL9A1-210, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 1,117 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-210ENST00000493682 TSPAN9O75954 239 aa14.26□□□□□ -0.13
COL9A1-210ENST00000493682 AMY2BP19961 511 aa14.26□□□□□ -0.13
COL9A1-210ENST00000493682 CX3CR1P49238 355 aa14.26□□□□□ -0.13
COL9A1-210ENST00000493682 HMGA2P52926 109 aa14.26□□□□□ -0.13
COL9A1-210ENST00000493682 DLX1P56177 255 aa14.26□□□□□ -0.13
COL9A1-210ENST00000493682 GRB2P62993 217 aaKnown RBP14.26□□□□□ -0.13
COL9A1-210ENST00000493682 GUCA2AQ02747 115 aa14.26□□□□□ -0.13
COL9A1-210ENST00000493682 IKZF1Q13422 519 aa14.26□□□□□ -0.13
COL9A1-210ENST00000493682 CRMP1Q14194 572 aa14.26□□□□□ -0.13
COL9A1-210ENST00000493682 TIGD6Q17RP2 521 aa14.26□□□□□ -0.13
COL9A1-210ENST00000493682 CMTM4Q8IZR5 234 aa14.26□□□□□ -0.13
COL9A1-210ENST00000493682 Q8N7P7 452 aa14.26□□□□□ -0.13
COL9A1-210ENST00000493682 C12orf43Q96C57 262 aaKnown RBP14.26□□□□□ -0.13
COL9A1-210ENST00000493682 REEP6Q96HR9 211 aa14.26□□□□□ -0.13
COL9A1-210ENST00000493682 NSMCE2Q96MF7 247 aa14.26□□□□□ -0.13
COL9A1-210ENST00000493682 KRTAP3-3Q9BYR6 98 aa14.26□□□□□ -0.13
COL9A1-210ENST00000493682 KRTAP3-2Q9BYR7 98 aa14.26□□□□□ -0.13
COL9A1-210ENST00000493682 NMNAT2Q9BZQ4 307 aa14.26□□□□□ -0.13
COL9A1-210ENST00000493682 ZNF446Q9NWS9 450 aa14.26□□□□□ -0.13
COL9A1-210ENST00000493682 DNAJB11Q9UBS4 358 aa14.26□□□□□ -0.13
COL9A1-210ENST00000493682 PRPF19Q9UMS4 504 aaKnown RBP14.26□□□□□ -0.13
COL9A1-210ENST00000493682 hCG_38984A0A1B0GV85 526 aa14.25□□□□□ -0.13
COL9A1-210ENST00000493682 A0A1W2PRD5 423 aa14.25□□□□□ -0.13
COL9A1-210ENST00000493682 A0A1W2PRF3 423 aa14.25□□□□□ -0.13
COL9A1-210ENST00000493682 A0A1W2PRM7 423 aa14.25□□□□□ -0.13
COL9A1-210ENST00000493682 CDIPTO14735 213 aa14.25□□□□□ -0.13
COL9A1-210ENST00000493682 GPR37O15354 613 aa14.25□□□□□ -0.13
COL9A1-210ENST00000493682 TIPRLO75663 272 aa14.25□□□□□ -0.13
COL9A1-210ENST00000493682 KRT36O76013 467 aa14.25□□□□□ -0.13
COL9A1-210ENST00000493682 ANXA2P07355 339 aaKnown RBP14.25□□□□□ -0.13
COL9A1-210ENST00000493682 CLUP10909 449 aa14.25□□□□□ -0.13
COL9A1-210ENST00000493682 SPI1P17947 270 aa14.25□□□□□ -0.13
COL9A1-210ENST00000493682 EEF1B2P24534 225 aaKnown RBP14.25□□□□□ -0.13
COL9A1-210ENST00000493682 NAA10P41227 235 aaPredicted RBP14.25□□□□□ -0.13
COL9A1-210ENST00000493682 SLC15A1P46059 708 aa14.25□□□□□ -0.13
COL9A1-210ENST00000493682 TGM4P49221 684 aa14.25□□□□□ -0.13
COL9A1-210ENST00000493682 SLC25A1P53007 311 aa14.25□□□□□ -0.13
COL9A1-210ENST00000493682 EGR3Q06889 387 aa14.25□□□□□ -0.13
COL9A1-210ENST00000493682 KLRD1Q13241 179 aa14.25□□□□□ -0.13
COL9A1-210ENST00000493682 C2orf68Q2NKX9 166 aa14.25□□□□□ -0.13
COL9A1-210ENST00000493682 DMRTA1Q5VZB9 504 aa14.25□□□□□ -0.13
COL9A1-210ENST00000493682 STUMQ69YW2 141 aa14.25□□□□□ -0.13
COL9A1-210ENST00000493682 ZNF770Q6IQ21 691 aaPredicted RBP14.25□□□□□ -0.13
COL9A1-210ENST00000493682 RASSF6Q6ZTQ3 369 aa14.25□□□□□ -0.13
COL9A1-210ENST00000493682 PRSS45Q7RTY3 260 aa14.25□□□□□ -0.13
COL9A1-210ENST00000493682 OR5T2Q8NGG2 359 aa14.25□□□□□ -0.13
COL9A1-210ENST00000493682 ELAC2Q9BQ52 826 aaKnown RBP14.25□□□□□ -0.13
COL9A1-210ENST00000493682 DCTN5Q9BTE1 182 aa14.25□□□□□ -0.13
COL9A1-210ENST00000493682 TLNRD1Q9H1K6 362 aa14.25□□□□□ -0.13
COL9A1-210ENST00000493682 TBC1D23Q9NUY8 699 aa14.25□□□□□ -0.13
COL9A1-210ENST00000493682 RHBDD3Q9Y3P4 386 aa14.25□□□□□ -0.13
COL9A1-210ENST00000493682 LYVE1Q9Y5Y7 322 aa14.25□□□□□ -0.13
COL9A1-210ENST00000493682 GASTP01350 101 aa14.24□□□□□ -0.13
COL9A1-210ENST00000493682 SELLP14151 372 aa14.24□□□□□ -0.13
COL9A1-210ENST00000493682 HSD11B1P28845 292 aa14.24□□□□□ -0.13
COL9A1-210ENST00000493682 TGFBR2P37173 567 aa14.24□□□□□ -0.13
COL9A1-210ENST00000493682 GSK3AP49840 483 aa14.24□□□□□ -0.13
COL9A1-210ENST00000493682 EIF2B1Q14232 305 aaKnown RBP14.24□□□□□ -0.13
COL9A1-210ENST00000493682 KLHL12Q53G59 568 aa14.24□□□□□ -0.13
COL9A1-210ENST00000493682 LRRC10Q5BKY1 277 aa14.24□□□□□ -0.13
COL9A1-210ENST00000493682 SAMD4BQ5PRF9 694 aaKnown RBP14.24□□□□□ -0.13
COL9A1-210ENST00000493682 ATPAF1Q5TC12 328 aaPredicted RBP14.24□□□□□ -0.13
COL9A1-210ENST00000493682 FAM57BQ71RH2 274 aa14.24□□□□□ -0.13
COL9A1-210ENST00000493682 PNKDQ8N490 385 aa14.24□□□□□ -0.13
COL9A1-210ENST00000493682 OR6K6Q8NGW6 343 aa14.24□□□□□ -0.13
COL9A1-210ENST00000493682 OR4Q3Q8NH05 313 aa14.24□□□□□ -0.13
COL9A1-210ENST00000493682 C8orf46Q8TAG6 207 aa14.24□□□□□ -0.13
COL9A1-210ENST00000493682 TNFRSF14Q92956 283 aa14.24□□□□□ -0.13
COL9A1-210ENST00000493682 PAPOLGQ9BWT3 736 aaKnown RBP14.24□□□□□ -0.13
COL9A1-210ENST00000493682 TSSK6Q9BXA6 273 aa14.24□□□□□ -0.13
COL9A1-210ENST00000493682 TOR3AQ9H497 397 aa14.24□□□□□ -0.13
COL9A1-210ENST00000493682 HAO2Q9NYQ3 351 aa14.24□□□□□ -0.13
COL9A1-210ENST00000493682 ZNF319Q9P2F9 582 aa14.24□□□□□ -0.13
COL9A1-210ENST00000493682 TNFRSF11BO00300 401 aa14.23□□□□□ -0.13
COL9A1-210ENST00000493682 CFL1P23528 166 aaKnown RBP14.23□□□□□ -0.13
COL9A1-210ENST00000493682 SAA4P35542 130 aa14.23□□□□□ -0.13
COL9A1-210ENST00000493682 GNALP38405 381 aa14.23□□□□□ -0.13
COL9A1-210ENST00000493682 ZNF121P58317 390 aaPredicted RBP14.23□□□□□ -0.13
COL9A1-210ENST00000493682 GMFBP60983 142 aa14.23□□□□□ -0.13
COL9A1-210ENST00000493682 LINC01590Q5TEZ4 76 aa14.23□□□□□ -0.13
COL9A1-210ENST00000493682 GALNT4Q8N4A0 578 aa14.23□□□□□ -0.13
COL9A1-210ENST00000493682 LINC00471Q8N535 108 aa14.23□□□□□ -0.13
COL9A1-210ENST00000493682 CSNK2A3Q8NEV1 391 aa14.23□□□□□ -0.13
COL9A1-210ENST00000493682 OR52H1Q8NGJ2 320 aa14.23□□□□□ -0.13
COL9A1-210ENST00000493682 H1FXQ92522 213 aaKnown RBP14.23□□□□□ -0.13
COL9A1-210ENST00000493682 ITPKCQ96DU7 683 aa14.23□□□□□ -0.13
COL9A1-210ENST00000493682 CDRT15Q96T59 188 aa14.23□□□□□ -0.13
COL9A1-210ENST00000493682 WDR13Q9H1Z4 485 aa14.23□□□□□ -0.13
COL9A1-210ENST00000493682 SP140LQ9H930 580 aa14.23□□□□□ -0.13
COL9A1-210ENST00000493682 SNTG1Q9NSN8 517 aa14.23□□□□□ -0.13
COL9A1-210ENST00000493682 DNAJC27Q9NZQ0 273 aa14.23□□□□□ -0.13
COL9A1-210ENST00000493682 BAIAP2Q9UQB8 552 aa14.23□□□□□ -0.13
COL9A1-210ENST00000493682 CCNB2O95067 398 aa14.22□□□□□ -0.13
COL9A1-210ENST00000493682 PAHP00439 452 aa14.22□□□□□ -0.13
COL9A1-210ENST00000493682 APOC1P02654 83 aa14.22□□□□□ -0.13
COL9A1-210ENST00000493682 TFF1P04155 84 aa14.22□□□□□ -0.13
COL9A1-210ENST00000493682 CSF1P09603 554 aa14.22□□□□□ -0.13
COL9A1-210ENST00000493682 BLVRAP53004 296 aa14.22□□□□□ -0.13
COL9A1-210ENST00000493682 IL5RAQ01344 420 aa14.22□□□□□ -0.13
COL9A1-210ENST00000493682 GFOD2Q3B7J2 385 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms