RNA–Protein interactions for RNA: ENST00000493475.2

COL6A3-213, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2

Gene COL6A3, Length 669 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-213ENST00000493475 ZNF391Q9UJN7 358 aa9.58□□□□□ -0.88
COL6A3-213ENST00000493475 A0A1W2PPH5 198 aa9.57□□□□□ -0.88
COL6A3-213ENST00000493475 TMEM210A6NLX4 147 aa9.57□□□□□ -0.88
COL6A3-213ENST00000493475 ARPC2O15144 300 aa9.57□□□□□ -0.88
COL6A3-213ENST00000493475 TGFBR2P37173 567 aa9.57□□□□□ -0.88
COL6A3-213ENST00000493475 IER3P46695 156 aa9.57□□□□□ -0.88
COL6A3-213ENST00000493475 EIF2B1Q14232 305 aaKnown RBP9.57□□□□□ -0.88
COL6A3-213ENST00000493475 GK3PQ14409 553 aa9.57□□□□□ -0.88
COL6A3-213ENST00000493475 GFOD2Q3B7J2 385 aa9.57□□□□□ -0.88
COL6A3-213ENST00000493475 C11orf88Q6PI97 169 aa9.57□□□□□ -0.88
COL6A3-213ENST00000493475 METAP1DQ6UB28 335 aaPredicted RBP9.57□□□□□ -0.88
COL6A3-213ENST00000493475 SLC16A9Q7RTY1 509 aa9.57□□□□□ -0.88
COL6A3-213ENST00000493475 VMO1Q7Z5L0 202 aa9.57□□□□□ -0.88
COL6A3-213ENST00000493475 SLC37A3Q8NCC5 494 aa9.57□□□□□ -0.88
COL6A3-213ENST00000493475 OR9Q1Q8NGQ5 310 aa9.57□□□□□ -0.88
COL6A3-213ENST00000493475 TEX47Q8TBZ9 253 aa9.57□□□□□ -0.88
COL6A3-213ENST00000493475 H1FXQ92522 213 aaKnown RBP9.57□□□□□ -0.88
COL6A3-213ENST00000493475 ITFG2Q969R8 447 aa9.57□□□□□ -0.88
COL6A3-213ENST00000493475 SPSB4Q96A44 273 aa9.57□□□□□ -0.88
COL6A3-213ENST00000493475 INTS14Q96SY0 518 aa9.57□□□□□ -0.88
COL6A3-213ENST00000493475 TSSK6Q9BXA6 273 aa9.57□□□□□ -0.88
COL6A3-213ENST00000493475 FAM107BQ9H098 131 aa9.57□□□□□ -0.88
COL6A3-213ENST00000493475 REEP1Q9H902 201 aa9.57□□□□□ -0.88
COL6A3-213ENST00000493475 VPREB3Q9UKI3 123 aa9.57□□□□□ -0.88
COL6A3-213ENST00000493475 MPC1Q9Y5U8 109 aa9.57□□□□□ -0.88
COL6A3-213ENST00000493475 SOX21Q9Y651 276 aaPredicted RBP9.57□□□□□ -0.88
COL6A3-213ENST00000493475 A0A0U1RQK1 487 aa9.56□□□□□ -0.88
COL6A3-213ENST00000493475 A0A1W2PQ09 198 aa9.56□□□□□ -0.88
COL6A3-213ENST00000493475 SLC22A31A6NKX4 558 aa9.56□□□□□ -0.88
COL6A3-213ENST00000493475 DCTN3O75935 186 aa9.56□□□□□ -0.88
COL6A3-213ENST00000493475 CLPXO76031 633 aa9.56□□□□□ -0.88
COL6A3-213ENST00000493475 LHBP01229 141 aa9.56□□□□□ -0.88
COL6A3-213ENST00000493475 IGHV4-59P01825 116 aa9.56□□□□□ -0.88
COL6A3-213ENST00000493475 SEMG1P04279 462 aa9.56□□□□□ -0.88
COL6A3-213ENST00000493475 H2BFMP0C1H6 154 aa9.56□□□□□ -0.88
COL6A3-213ENST00000493475 SLC2A1P11166 492 aa9.56□□□□□ -0.88
COL6A3-213ENST00000493475 POU1F1P28069 291 aa9.56□□□□□ -0.88
COL6A3-213ENST00000493475 HMGA2P52926 109 aa9.56□□□□□ -0.88
COL6A3-213ENST00000493475 IKZF1Q13422 519 aa9.56□□□□□ -0.88
COL6A3-213ENST00000493475 PCK2Q16822 640 aa9.56□□□□□ -0.88
COL6A3-213ENST00000493475 FAM98BQ52LJ0 330 aaKnown RBP9.56□□□□□ -0.88
COL6A3-213ENST00000493475 ZNF826PQ6ZT77 177 aa9.56□□□□□ -0.88
COL6A3-213ENST00000493475 KCTD8Q6ZWB6 473 aa9.56□□□□□ -0.88
COL6A3-213ENST00000493475 TIGD4Q8IY51 512 aa9.56□□□□□ -0.88
COL6A3-213ENST00000493475 AQP11Q8NBQ7 271 aa9.56□□□□□ -0.88
COL6A3-213ENST00000493475 OR1M1Q8NGA1 313 aa9.56□□□□□ -0.88
COL6A3-213ENST00000493475 OR51L1Q8NGJ5 315 aa9.56□□□□□ -0.88
COL6A3-213ENST00000493475 OR10Z1Q8NGY1 313 aa9.56□□□□□ -0.88
COL6A3-213ENST00000493475 OR6N2Q8NGY6 317 aa9.56□□□□□ -0.88
COL6A3-213ENST00000493475 OTULINQ96BN8 352 aa9.56□□□□□ -0.88
COL6A3-213ENST00000493475 PGAM5Q96HS1 289 aa9.56□□□□□ -0.88
COL6A3-213ENST00000493475 CDRT15Q96T59 188 aa9.56□□□□□ -0.88
COL6A3-213ENST00000493475 RBM4BQ9BQ04 359 aaKnown RBP9.56□□□□□ -0.88
COL6A3-213ENST00000493475 MYLK2Q9H1R3 596 aa9.56□□□□□ -0.88
COL6A3-213ENST00000493475 RASSF4Q9H2L5 321 aa9.56□□□□□ -0.88
COL6A3-213ENST00000493475 MUC13Q9H3R2 512 aa9.56□□□□□ -0.88
COL6A3-213ENST00000493475 SMURF1Q9HCE7 757 aa9.56□□□□□ -0.88
COL6A3-213ENST00000493475 RAB18Q9NP72 206 aa9.56□□□□□ -0.88
COL6A3-213ENST00000493475 PDP1Q9P0J1 537 aaPredicted RBP9.56□□□□□ -0.88
COL6A3-213ENST00000493475 TAGLN3Q9UI15 199 aa9.56□□□□□ -0.88
COL6A3-213ENST00000493475 LYVE1Q9Y5Y7 322 aa9.56□□□□□ -0.88
COL6A3-213ENST00000493475 DOCK11Q5JSL3 2073 aa9.55□□□□□ -0.88
COL6A3-213ENST00000493475 IGHV3OR15-7A0A075B7D8 119 aa9.55□□□□□ -0.88
COL6A3-213ENST00000493475 hCG_1809904A0A1W2PP81 198 aa9.55□□□□□ -0.88
COL6A3-213ENST00000493475 A0A1W2PPE2 198 aa9.55□□□□□ -0.88
COL6A3-213ENST00000493475 A0A1W2PR64 198 aa9.55□□□□□ -0.88
COL6A3-213ENST00000493475 A0A1W2PRV1 198 aa9.55□□□□□ -0.88
COL6A3-213ENST00000493475 DHRS12A0PJE2 317 aa9.55□□□□□ -0.88
COL6A3-213ENST00000493475 SPI1P17947 270 aa9.55□□□□□ -0.88
COL6A3-213ENST00000493475 GSTT1P30711 240 aa9.55□□□□□ -0.88
COL6A3-213ENST00000493475 RPS27P42677 84 aaKnown RBP9.55□□□□□ -0.88
COL6A3-213ENST00000493475 FAM3AP98173 230 aa9.55□□□□□ -0.88
COL6A3-213ENST00000493475 ACSM1Q08AH1 577 aa9.55□□□□□ -0.88
COL6A3-213ENST00000493475 CRMP1Q14194 572 aa9.55□□□□□ -0.88
COL6A3-213ENST00000493475 WDR38Q5JTN6 314 aa9.55□□□□□ -0.88
COL6A3-213ENST00000493475 C1orf122Q6ZSJ8 110 aa9.55□□□□□ -0.88
COL6A3-213ENST00000493475 Q6ZTK2 550 aa9.55□□□□□ -0.88
COL6A3-213ENST00000493475 FAM57BQ71RH2 274 aa9.55□□□□□ -0.88
COL6A3-213ENST00000493475 ERI1Q8IV48 349 aaKnown RBP9.55□□□□□ -0.88
COL6A3-213ENST00000493475 PDZD9Q8IXQ8 264 aa9.55□□□□□ -0.88
COL6A3-213ENST00000493475 ARHGAP24Q8N264 748 aa9.55□□□□□ -0.88
COL6A3-213ENST00000493475 ZSCAN4Q8NAM6 433 aaPredicted RBP9.55□□□□□ -0.88
COL6A3-213ENST00000493475 OR9Q2Q8NGE9 314 aa9.55□□□□□ -0.88
COL6A3-213ENST00000493475 OR5D13Q8NGL4 314 aa9.55□□□□□ -0.88
COL6A3-213ENST00000493475 LINC01006Q8NI28 216 aa9.55□□□□□ -0.88
COL6A3-213ENST00000493475 FAM81AQ8TBF8 368 aa9.55□□□□□ -0.88
COL6A3-213ENST00000493475 CCL13Q99616 98 aa9.55□□□□□ -0.88
COL6A3-213ENST00000493475 MAGIXQ9H6Y5 334 aa9.55□□□□□ -0.88
COL6A3-213ENST00000493475 METTL8Q9H825 291 aaKnown RBP9.55□□□□□ -0.88
COL6A3-213ENST00000493475 NIPAL2Q9H841 368 aa9.55□□□□□ -0.88
COL6A3-213ENST00000493475 HAO2Q9NYQ3 351 aa9.55□□□□□ -0.88
COL6A3-213ENST00000493475 TRRAPQ9Y4A5 3859 aa9.54□□□□□ -0.88
COL6A3-213ENST00000493475 MEIOCA2RUB1 952 aa9.54□□□□□ -0.88
COL6A3-213ENST00000493475 H3BN98 237 aa9.54□□□□□ -0.88
COL6A3-213ENST00000493475 M0R1W7 72 aa9.54□□□□□ -0.88
COL6A3-213ENST00000493475 CDIPTO14735 213 aa9.54□□□□□ -0.88
COL6A3-213ENST00000493475 NPFFO15130 113 aa9.54□□□□□ -0.88
COL6A3-213ENST00000493475 GLCEO94923 617 aa9.54□□□□□ -0.88
COL6A3-213ENST00000493475 GYPBP06028 91 aa9.54□□□□□ -0.88
COL6A3-213ENST00000493475 CSF1P09603 554 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms