RNA–Protein interactions for RNA: ENST00000491128.5

SMPD4-219, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 2,570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-219ENST00000491128 IGHV3-64DA0A0J9YX35 117 aa12.04□□□□□ -0.48
SMPD4-219ENST00000491128 C3orf80F5H4A9 247 aa12.04□□□□□ -0.48
SMPD4-219ENST00000491128 LILRA1O75019 489 aa12.04□□□□□ -0.48
SMPD4-219ENST00000491128 UBL3O95164 117 aa12.04□□□□□ -0.48
SMPD4-219ENST00000491128 ART1P52961 327 aa12.04□□□□□ -0.48
SMPD4-219ENST00000491128 CARTPTQ16568 116 aa12.04□□□□□ -0.48
SMPD4-219ENST00000491128 MOGAT2Q3SYC2 334 aa12.04□□□□□ -0.48
SMPD4-219ENST00000491128 LYPD6Q86Y78 171 aa12.04□□□□□ -0.48
SMPD4-219ENST00000491128 CMBLQ96DG6 245 aa12.04□□□□□ -0.48
SMPD4-219ENST00000491128 RNF170Q96K19 258 aa12.04□□□□□ -0.48
SMPD4-219ENST00000491128 COX4I2Q96KJ9 171 aa12.04□□□□□ -0.48
SMPD4-219ENST00000491128 ATG5Q9H1Y0 275 aa12.04□□□□□ -0.48
SMPD4-219ENST00000491128 BANF2Q9H503 90 aa12.04□□□□□ -0.48
SMPD4-219ENST00000491128 MEIOCA2RUB1 952 aa12.04□□□□□ -0.48
SMPD4-219ENST00000491128 FAM27E3Q08E93 113 aa12.04□□□□□ -0.48
SMPD4-219ENST00000491128 AWAT2Q6E213 333 aa12.04□□□□□ -0.48
SMPD4-219ENST00000491128 CRIP3Q6Q6R5 217 aa12.04□□□□□ -0.48
SMPD4-219ENST00000491128 GDPD3Q7L5L3 318 aa12.04□□□□□ -0.48
SMPD4-219ENST00000491128 WDR31Q8NA23 367 aa12.04□□□□□ -0.48
SMPD4-219ENST00000491128 CCDC32Q9BV29 185 aa12.04□□□□□ -0.48
SMPD4-219ENST00000491128 CADP27708 2225 aa12.04□□□□□ -0.48
SMPD4-219ENST00000491128 A0A0G2JNJ9 132 aa12.03□□□□□ -0.48
SMPD4-219ENST00000491128 hCG_38984A0A1B0GV85 526 aa12.03□□□□□ -0.48
SMPD4-219ENST00000491128 FUOMA2VDF0 154 aa12.03□□□□□ -0.48
SMPD4-219ENST00000491128 GMDSO60547 372 aa12.03□□□□□ -0.48
SMPD4-219ENST00000491128 SERPINA5P05154 406 aa12.03□□□□□ -0.48
SMPD4-219ENST00000491128 RBMXP38159 391 aaKnown RBP12.03□□□□□ -0.48
SMPD4-219ENST00000491128 TMEM69Q5SWH9 247 aa12.03□□□□□ -0.48
SMPD4-219ENST00000491128 ZNF57Q68EA5 555 aaPredicted RBP12.03□□□□□ -0.48
SMPD4-219ENST00000491128 ZNF529Q6P280 563 aa12.03□□□□□ -0.48
SMPD4-219ENST00000491128 KRT74Q7RTS7 529 aa12.03□□□□□ -0.48
SMPD4-219ENST00000491128 NRARPQ7Z6K4 114 aa12.03□□□□□ -0.48
SMPD4-219ENST00000491128 LIX1LQ8IVB5 337 aa12.03□□□□□ -0.48
SMPD4-219ENST00000491128 ACBD4Q8NC06 268 aa12.03□□□□□ -0.48
SMPD4-219ENST00000491128 TMEM104Q8NE00 496 aa12.03□□□□□ -0.48
SMPD4-219ENST00000491128 THRSPQ92748 146 aa12.03□□□□□ -0.48
SMPD4-219ENST00000491128 S100A16Q96FQ6 103 aaKnown RBP12.03□□□□□ -0.48
SMPD4-219ENST00000491128 THAP7Q9BT49 309 aaPredicted RBP12.03□□□□□ -0.48
SMPD4-219ENST00000491128 Q9UFV3 132 aa12.03□□□□□ -0.48
SMPD4-219ENST00000491128 GPR160Q9UJ42 338 aa12.03□□□□□ -0.48
SMPD4-219ENST00000491128 LOC100289279A0A1B0GTE1 492 aa12.03□□□□□ -0.48
SMPD4-219ENST00000491128 PLA2G10O15496 165 aa12.03□□□□□ -0.48
SMPD4-219ENST00000491128 ANGPTL7O43827 346 aa12.03□□□□□ -0.48
SMPD4-219ENST00000491128 MTRF1O75570 445 aaKnown RBP12.03□□□□□ -0.48
SMPD4-219ENST00000491128 CTAG2O75638 210 aa12.03□□□□□ -0.48
SMPD4-219ENST00000491128 HLA-DQB1P01920 261 aa12.03□□□□□ -0.48
SMPD4-219ENST00000491128 ZNF14P17017 642 aaPredicted RBP12.03□□□□□ -0.48
SMPD4-219ENST00000491128 UNC119Q13432 240 aa12.03□□□□□ -0.48
SMPD4-219ENST00000491128 OXA1LQ15070 435 aa12.03□□□□□ -0.48
SMPD4-219ENST00000491128 KISS1Q15726 138 aa12.03□□□□□ -0.48
SMPD4-219ENST00000491128 TRIQKQ629K1 86 aa12.03□□□□□ -0.48
SMPD4-219ENST00000491128 GLIPR1L1Q6UWM5 242 aa12.03□□□□□ -0.48
SMPD4-219ENST00000491128 GDPD1Q8N9F7 314 aa12.03□□□□□ -0.48
SMPD4-219ENST00000491128 OR56B2PQ8NGI1 322 aa12.03□□□□□ -0.48
SMPD4-219ENST00000491128 OR6M1Q8NGM8 313 aa12.03□□□□□ -0.48
SMPD4-219ENST00000491128 CHPT1Q8WUD6 406 aa12.03□□□□□ -0.48
SMPD4-219ENST00000491128 SORCS2Q96PQ0 1159 aa12.03□□□□□ -0.48
SMPD4-219ENST00000491128 C11orf54Q9H0W9 315 aaPredicted RBP12.03□□□□□ -0.48
SMPD4-219ENST00000491128 KLK11Q9UBX7 282 aa12.03□□□□□ -0.48
SMPD4-219ENST00000491128 FZR1Q9UM11 496 aa12.03□□□□□ -0.48
SMPD4-219ENST00000491128 IGKV1-27A0A075B6S5 117 aa12.02□□□□□ -0.48
SMPD4-219ENST00000491128 ZNF850A8MQ14 1090 aa12.02□□□□□ -0.48
SMPD4-219ENST00000491128 SPRY1O43609 319 aaPredicted RBP12.02□□□□□ -0.48
SMPD4-219ENST00000491128 PTH2RP49190 550 aa12.02□□□□□ -0.48
SMPD4-219ENST00000491128 GUCA2AQ02747 115 aa12.02□□□□□ -0.48
SMPD4-219ENST00000491128 RIPPLY1Q0D2K3 151 aa12.02□□□□□ -0.48
SMPD4-219ENST00000491128 SNTB1Q13884 538 aaKnown RBP12.02□□□□□ -0.48
SMPD4-219ENST00000491128 SLC22A6Q4U2R8 563 aa12.02□□□□□ -0.48
SMPD4-219ENST00000491128 COLCA1Q6ZS62 124 aa12.02□□□□□ -0.48
SMPD4-219ENST00000491128 NICN1Q9BSH3 213 aa12.02□□□□□ -0.48
SMPD4-219ENST00000491128 CHST5Q9GZS9 411 aa12.02□□□□□ -0.48
SMPD4-219ENST00000491128 ELL3Q9HB65 397 aaPredicted RBP12.02□□□□□ -0.48
SMPD4-219ENST00000491128 POLEQ07864 2286 aa12.02□□□□□ -0.49
SMPD4-219ENST00000491128 TRAV18A0A075B6X5 111 aa12.02□□□□□ -0.49
SMPD4-219ENST00000491128 MEGF11A6BM72 1044 aa12.02□□□□□ -0.49
SMPD4-219ENST00000491128 VSIG8P0DPA2 414 aa12.02□□□□□ -0.49
SMPD4-219ENST00000491128 COX5AP20674 150 aa12.02□□□□□ -0.49
SMPD4-219ENST00000491128 HOXC12P31275 282 aa12.02□□□□□ -0.49
SMPD4-219ENST00000491128 PTGER4P35408 488 aa12.02□□□□□ -0.49
SMPD4-219ENST00000491128 PGAP1Q75T13 922 aa12.02□□□□□ -0.49
SMPD4-219ENST00000491128 NANOS1Q8WY41 292 aaKnown RBP12.02□□□□□ -0.49
SMPD4-219ENST00000491128 S100PBPQ96BU1 408 aa12.02□□□□□ -0.49
SMPD4-219ENST00000491128 HAVCR1Q96D42 359 aa12.02□□□□□ -0.49
SMPD4-219ENST00000491128 MMP28Q9H239 520 aa12.02□□□□□ -0.49
SMPD4-219ENST00000491128 METTL17Q9H7H0 456 aaPredicted RBP12.02□□□□□ -0.49
SMPD4-219ENST00000491128 ZFYVE26Q68DK2 2539 aa12.02□□□□□ -0.49
SMPD4-219ENST00000491128 TRGV8A0A0C4DH27 118 aa12.01□□□□□ -0.49
SMPD4-219ENST00000491128 LOC390937A0A1W2PQ73 354 aa12.01□□□□□ -0.49
SMPD4-219ENST00000491128 ZNF12P17014 697 aa12.01□□□□□ -0.49
SMPD4-219ENST00000491128 RFX2P48378 723 aa12.01□□□□□ -0.49
SMPD4-219ENST00000491128 OR2T2Q6IF00 324 aa12.01□□□□□ -0.49
SMPD4-219ENST00000491128 MOB3CQ70IA8 216 aa12.01□□□□□ -0.49
SMPD4-219ENST00000491128 BHLHA15Q7RTS1 189 aaPredicted RBP12.01□□□□□ -0.49
SMPD4-219ENST00000491128 CELF2-AS1Q8N7Q2 184 aa12.01□□□□□ -0.49
SMPD4-219ENST00000491128 C19orf18Q8NEA5 215 aa12.01□□□□□ -0.49
SMPD4-219ENST00000491128 NEURL2Q9BR09 285 aa12.01□□□□□ -0.49
SMPD4-219ENST00000491128 TP63Q9H3D4 680 aaPredicted RBP12.01□□□□□ -0.49
SMPD4-219ENST00000491128 ING4Q9UNL4 249 aa12.01□□□□□ -0.49
SMPD4-219ENST00000491128 MRPS28Q9Y2Q9 187 aaKnown RBP12.01□□□□□ -0.49
SMPD4-219ENST00000491128 ATXN7O15265 892 aaPredicted RBP12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms