RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 CTNSO60931 367 aa2.04□□□□□ -2.08
CD46-216ENST00000490278 HSBP1O75506 76 aa2.04□□□□□ -2.08
CD46-216ENST00000490278 FARS2O95363 451 aaKnown RBP2.04□□□□□ -2.08
CD46-216ENST00000490278 TRBV12-3P01733 135 aa2.04□□□□□ -2.08
CD46-216ENST00000490278 RPN2P04844 631 aa2.04□□□□□ -2.08
CD46-216ENST00000490278 STAG3L3P0CL85 134 aa2.04□□□□□ -2.08
CD46-216ENST00000490278 APLNRP35414 380 aa2.04□□□□□ -2.08
CD46-216ENST00000490278 RAB11AP62491 216 aa2.04□□□□□ -2.08
CD46-216ENST00000490278 OR1Q1Q15612 314 aa2.04□□□□□ -2.08
CD46-216ENST00000490278 RAB11BQ15907 218 aa2.04□□□□□ -2.08
CD46-216ENST00000490278 C5orf64Q2M2E5 130 aa2.04□□□□□ -2.08
CD46-216ENST00000490278 MFSD14CQ5VZR4 134 aa2.04□□□□□ -2.08
CD46-216ENST00000490278 OR2T5Q6IEZ7 315 aa2.04□□□□□ -2.08
CD46-216ENST00000490278 SPINT4Q6UDR6 99 aa2.04□□□□□ -2.08
CD46-216ENST00000490278 Q6ZSR6 202 aa2.04□□□□□ -2.08
CD46-216ENST00000490278 TMCO2Q7Z6W1 182 aaPredicted RBP2.04□□□□□ -2.08
CD46-216ENST00000490278 ADGRA3Q8IWK6 1321 aa2.04□□□□□ -2.08
CD46-216ENST00000490278 CMTM8Q8IZV2 173 aa2.04□□□□□ -2.08
CD46-216ENST00000490278 DRAM1Q8N682 238 aa2.04□□□□□ -2.08
CD46-216ENST00000490278 OR2T29Q8NH02 315 aa2.04□□□□□ -2.08
CD46-216ENST00000490278 CPNE4Q96A23 557 aaPredicted RBP2.04□□□□□ -2.08
CD46-216ENST00000490278 CSPG4P5Q96PW8 444 aa2.04□□□□□ -2.08
CD46-216ENST00000490278 FRMD8P1Q9BZ68 369 aaPredicted RBP2.04□□□□□ -2.08
CD46-216ENST00000490278 C8orf33Q9H7E9 229 aaPredicted RBP2.04□□□□□ -2.08
CD46-216ENST00000490278 TREX1Q9NSU2 369 aa2.04□□□□□ -2.08
CD46-216ENST00000490278 RBFOX1Q9NWB1 397 aaKnown RBP2.04□□□□□ -2.08
CD46-216ENST00000490278 FARSAQ9Y285 508 aaKnown RBP2.04□□□□□ -2.08
CD46-216ENST00000490278 ZNF257Q9Y2Q1 563 aa2.04□□□□□ -2.08
CD46-216ENST00000490278 TNKS1BP1Q9C0C2 1729 aaKnown RBP2.03□□□□□ -2.08
CD46-216ENST00000490278 TTC41PQ6P2S7 1318 aa2.03□□□□□ -2.08
CD46-216ENST00000490278 A0A1B0GTQ1 180 aa2.03□□□□□ -2.08
CD46-216ENST00000490278 CASC3O15234 703 aaKnown RBP2.03□□□□□ -2.08
CD46-216ENST00000490278 SCELO95171 688 aa2.03□□□□□ -2.08
CD46-216ENST00000490278 LHBP01229 141 aa2.03□□□□□ -2.08
CD46-216ENST00000490278 PTHP01270 115 aa2.03□□□□□ -2.08
CD46-216ENST00000490278 CATP04040 527 aaKnown RBP2.03□□□□□ -2.08
CD46-216ENST00000490278 RALBP11234 206 aa2.03□□□□□ -2.08
CD46-216ENST00000490278 PRKACBP22694 351 aa2.03□□□□□ -2.08
CD46-216ENST00000490278 OR1G1P47890 313 aa2.03□□□□□ -2.08
CD46-216ENST00000490278 HADHQ16836 314 aaKnown RBP2.03□□□□□ -2.08
CD46-216ENST00000490278 KLHL12Q53G59 568 aa2.03□□□□□ -2.08
CD46-216ENST00000490278 PIP5KL1Q5T9C9 394 aa2.03□□□□□ -2.08
CD46-216ENST00000490278 KIF2BQ8N4N8 673 aa2.03□□□□□ -2.08
CD46-216ENST00000490278 KLF14Q8TD94 323 aaPredicted RBP2.03□□□□□ -2.08
CD46-216ENST00000490278 PHF10Q8WUB8 498 aaKnown RBP2.03□□□□□ -2.08
CD46-216ENST00000490278 PEX13Q92968 403 aa2.03□□□□□ -2.08
CD46-216ENST00000490278 NAT6Q93015 286 aa2.03□□□□□ -2.08
CD46-216ENST00000490278 ISOC2Q96AB3 205 aa2.03□□□□□ -2.08
CD46-216ENST00000490278 WDR34Q96EX3 536 aa2.03□□□□□ -2.08
CD46-216ENST00000490278 RHOXF2Q9BQY4 288 aa2.03□□□□□ -2.08
CD46-216ENST00000490278 MARVELD1Q9BSK0 173 aa2.03□□□□□ -2.08
CD46-216ENST00000490278 SFXN3Q9BWM7 321 aa2.03□□□□□ -2.08
CD46-216ENST00000490278 REEP1Q9H902 201 aa2.03□□□□□ -2.08
CD46-216ENST00000490278 CSNK1G1Q9HCP0 422 aa2.03□□□□□ -2.08
CD46-216ENST00000490278 TSPOAP1O95153 1857 aa2.03□□□□□ -2.09
CD46-216ENST00000490278 SLC22A20A6NK97 555 aa2.02□□□□□ -2.09
CD46-216ENST00000490278 GOLGA8JA6NMD2 632 aa2.02□□□□□ -2.09
CD46-216ENST00000490278 CENPBD1B2RD01 187 aa2.02□□□□□ -2.09
CD46-216ENST00000490278 PSPHP1O15172 72 aa2.02□□□□□ -2.09
CD46-216ENST00000490278 SCO1O75880 301 aa2.02□□□□□ -2.09
CD46-216ENST00000490278 IGLV2-8P01709 118 aa2.02□□□□□ -2.09
CD46-216ENST00000490278 GOLGA8HP0CJ92 632 aa2.02□□□□□ -2.09
CD46-216ENST00000490278 THRAP10827 490 aa2.02□□□□□ -2.09
CD46-216ENST00000490278 NTF3P20783 257 aa2.02□□□□□ -2.09
CD46-216ENST00000490278 GDI2P50395 445 aaKnown RBP2.02□□□□□ -2.09
CD46-216ENST00000490278 CMC4P56277 68 aaPredicted RBP2.02□□□□□ -2.09
CD46-216ENST00000490278 CLDN6P56747 220 aa2.02□□□□□ -2.09
CD46-216ENST00000490278 CLDN8P56748 225 aa2.02□□□□□ -2.09
CD46-216ENST00000490278 TAS2R43P59537 309 aa2.02□□□□□ -2.09
CD46-216ENST00000490278 ATP6V0D1P61421 351 aa2.02□□□□□ -2.09
CD46-216ENST00000490278 YWHAEP62258 255 aaKnown RBP2.02□□□□□ -2.09
CD46-216ENST00000490278 SPAG1Q07617 926 aa2.02□□□□□ -2.09
CD46-216ENST00000490278 IGFBP7Q16270 282 aa2.02□□□□□ -2.09
CD46-216ENST00000490278 C6orf99Q4VX62 202 aa2.02□□□□□ -2.09
CD46-216ENST00000490278 TPRG1LQ5T0D9 272 aa2.02□□□□□ -2.09
CD46-216ENST00000490278 TMEM236Q5W0B7 351 aa2.02□□□□□ -2.09
CD46-216ENST00000490278 PRSS54Q6PEW0 395 aa2.02□□□□□ -2.09
CD46-216ENST00000490278 DEGS2Q6QHC5 323 aa2.02□□□□□ -2.09
CD46-216ENST00000490278 CASP12Q6UXS9 341 aa2.02□□□□□ -2.09
CD46-216ENST00000490278 SLC30A8Q8IWU4 369 aa2.02□□□□□ -2.09
CD46-216ENST00000490278 TRAM1L1Q8N609 369 aa2.02□□□□□ -2.09
CD46-216ENST00000490278 OR2Z1Q8NG97 314 aa2.02□□□□□ -2.09
CD46-216ENST00000490278 ZFP3Q96NJ6 502 aa2.02□□□□□ -2.09
CD46-216ENST00000490278 RDH12Q96NR8 316 aa2.02□□□□□ -2.09
CD46-216ENST00000490278 GPR82Q96P67 336 aa2.02□□□□□ -2.09
CD46-216ENST00000490278 NAA50Q9GZZ1 169 aaKnown RBP2.02□□□□□ -2.09
CD46-216ENST00000490278 NCOR1P1Q9H4R4 102 aa2.02□□□□□ -2.09
CD46-216ENST00000490278 PRSS16Q9NQE7 514 aa2.02□□□□□ -2.09
CD46-216ENST00000490278 FBXO8Q9NRD0 319 aa2.02□□□□□ -2.09
CD46-216ENST00000490278 ADA2Q9NZK5 511 aa2.02□□□□□ -2.09
CD46-216ENST00000490278 RABL2AQ9UBK7 228 aaPredicted RBP2.02□□□□□ -2.09
CD46-216ENST00000490278 PSME2Q9UL46 239 aa2.02□□□□□ -2.09
CD46-216ENST00000490278 CEACAM18A8MTB9 384 aa2.01□□□□□ -2.09
CD46-216ENST00000490278 ZNF99A8MXY4 864 aaPredicted RBP2.01□□□□□ -2.09
CD46-216ENST00000490278 MPV17P39210 176 aa2.01□□□□□ -2.09
CD46-216ENST00000490278 TAS2R39P59534 338 aa2.01□□□□□ -2.09
CD46-216ENST00000490278 MAD2L1BPQ15013 274 aaPredicted RBP2.01□□□□□ -2.09
CD46-216ENST00000490278 LUZP6Q538Z0 58 aa2.01□□□□□ -2.09
CD46-216ENST00000490278 HIKESHIQ53FT3 197 aa2.01□□□□□ -2.09
CD46-216ENST00000490278 TTC19Q6DKK2 380 aaPredicted RBP2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms