RNA–Protein interactions for RNA: ENST00000489573.5

SMC4-221, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 1 (best)

Gene SMC4, Length 1,553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-221ENST00000489573 CLVS2Q5SYC1 327 aa18.66■□□□□ 0.58
SMC4-221ENST00000489573 TMEM42Q69YG0 159 aa18.66■□□□□ 0.58
SMC4-221ENST00000489573 ALKBH2Q6NS38 261 aa18.66■□□□□ 0.58
SMC4-221ENST00000489573 UNQ6126/PRO20091Q6UXV3 157 aa18.66■□□□□ 0.58
SMC4-221ENST00000489573 CDH26Q8IXH8 852 aa18.66■□□□□ 0.58
SMC4-221ENST00000489573 DIRAS2Q96HU8 199 aa18.66■□□□□ 0.58
SMC4-221ENST00000489573 SORCS2Q96PQ0 1159 aa18.66■□□□□ 0.58
SMC4-221ENST00000489573 GPR173Q9NS66 373 aa18.66■□□□□ 0.58
SMC4-221ENST00000489573 NPAP1Q9NZP6 1156 aa18.66■□□□□ 0.58
SMC4-221ENST00000489573 IGHV2OR16-5A0A0B4J2B6 119 aa18.65■□□□□ 0.58
SMC4-221ENST00000489573 A0A1B0GUH1 482 aa18.65■□□□□ 0.58
SMC4-221ENST00000489573 FAM25AB3EWG3 89 aa18.65■□□□□ 0.58
SMC4-221ENST00000489573 FAM25CB3EWG5 89 aa18.65■□□□□ 0.58
SMC4-221ENST00000489573 FAM25GB3EWG6 89 aa18.65■□□□□ 0.58
SMC4-221ENST00000489573 J3QRK9 145 aa18.65■□□□□ 0.58
SMC4-221ENST00000489573 M0R1B8 84 aa18.65■□□□□ 0.58
SMC4-221ENST00000489573 PRF1P14222 555 aa18.65■□□□□ 0.58
SMC4-221ENST00000489573 UCP2P55851 309 aa18.65■□□□□ 0.58
SMC4-221ENST00000489573 SSX8Q7RTT4 187 aa18.65■□□□□ 0.58
SMC4-221ENST00000489573 LRRC28Q86X40 367 aaPredicted RBP18.65■□□□□ 0.58
SMC4-221ENST00000489573 GALNT11Q8NCW6 608 aa18.65■□□□□ 0.58
SMC4-221ENST00000489573 CSNK2A3Q8NEV1 391 aa18.65■□□□□ 0.58
SMC4-221ENST00000489573 BORCS5Q969J3 196 aa18.65■□□□□ 0.58
SMC4-221ENST00000489573 CCDC120Q96HB5 630 aa18.65■□□□□ 0.58
SMC4-221ENST00000489573 BBC3Q96PG8 261 aaPredicted RBP18.65■□□□□ 0.58
SMC4-221ENST00000489573 NKX3-1Q99801 234 aaPredicted RBP18.65■□□□□ 0.58
SMC4-221ENST00000489573 UQCC2Q9BRT2 126 aa18.65■□□□□ 0.58
SMC4-221ENST00000489573 OR5V1Q9UGF6 321 aa18.65■□□□□ 0.58
SMC4-221ENST00000489573 KCNN3Q9UGI6 736 aa18.65■□□□□ 0.58
SMC4-221ENST00000489573 ETV7Q9Y603 341 aa18.65■□□□□ 0.58
SMC4-221ENST00000489573 ELK1P19419 428 aa18.64■□□□□ 0.58
SMC4-221ENST00000489573 AZGP1P25311 298 aaKnown RBP18.64■□□□□ 0.58
SMC4-221ENST00000489573 ZNF93P35789 620 aaPredicted RBP18.64■□□□□ 0.58
SMC4-221ENST00000489573 NAAAQ02083 359 aa18.64■□□□□ 0.58
SMC4-221ENST00000489573 CNN3Q15417 329 aaKnown RBP18.64■□□□□ 0.58
SMC4-221ENST00000489573 SPATA46Q5T0L3 261 aa18.64■□□□□ 0.58
SMC4-221ENST00000489573 CNIH2Q6PI25 160 aa18.64■□□□□ 0.58
SMC4-221ENST00000489573 FBXW12Q6X9E4 464 aa18.64■□□□□ 0.58
SMC4-221ENST00000489573 OR1J1Q8NGS3 322 aa18.64■□□□□ 0.58
SMC4-221ENST00000489573 UBASH3BQ8TF42 649 aa18.64■□□□□ 0.58
SMC4-221ENST00000489573 SLC25A28Q96A46 364 aa18.64■□□□□ 0.58
SMC4-221ENST00000489573 CMTM3Q96MX0 182 aa18.64■□□□□ 0.58
SMC4-221ENST00000489573 RHBDD3Q9Y3P4 386 aa18.64■□□□□ 0.58
SMC4-221ENST00000489573 FAM90A27PA6NNH2 459 aa18.64■□□□□ 0.57
SMC4-221ENST00000489573 GMDSO60547 372 aa18.64■□□□□ 0.57
SMC4-221ENST00000489573 NRASP01111 189 aa18.64■□□□□ 0.57
SMC4-221ENST00000489573 EIF4EP06730 217 aaKnown RBP18.64■□□□□ 0.57
SMC4-221ENST00000489573 CALCRP30988 508 aa18.64■□□□□ 0.57
SMC4-221ENST00000489573 RAD52P43351 418 aa18.64■□□□□ 0.57
SMC4-221ENST00000489573 EVX1P49640 407 aa18.64■□□□□ 0.57
SMC4-221ENST00000489573 DCTN2Q13561 401 aaKnown RBP18.64■□□□□ 0.57
SMC4-221ENST00000489573 FBXL19-AS1Q494R0 122 aa18.64■□□□□ 0.57
SMC4-221ENST00000489573 UBE2NLQ5JXB2 153 aa18.64■□□□□ 0.57
SMC4-221ENST00000489573 SEZ6L2Q6UXD5 910 aa18.64■□□□□ 0.57
SMC4-221ENST00000489573 SSC4DQ8WTU2 575 aa18.64■□□□□ 0.57
SMC4-221ENST00000489573 NPRL2Q8WTW4 380 aa18.64■□□□□ 0.57
SMC4-221ENST00000489573 PIGTQ969N2 578 aa18.64■□□□□ 0.57
SMC4-221ENST00000489573 SPSB1Q96BD6 273 aa18.64■□□□□ 0.57
SMC4-221ENST00000489573 FAM3DQ96BQ1 224 aa18.64■□□□□ 0.57
SMC4-221ENST00000489573 TECTBQ96PL2 329 aa18.64■□□□□ 0.57
SMC4-221ENST00000489573 CNTD2Q9H8S5 307 aa18.64■□□□□ 0.57
SMC4-221ENST00000489573 NEK6Q9HC98 313 aa18.64■□□□□ 0.57
SMC4-221ENST00000489573 V9GYH0 126 aa18.64■□□□□ 0.57
SMC4-221ENST00000489573 CD300LBA8K4G0 201 aa18.63■□□□□ 0.57
SMC4-221ENST00000489573 APOA1P02647 267 aa18.63■□□□□ 0.57
SMC4-221ENST00000489573 PPP3CBP16298 524 aa18.63■□□□□ 0.57
SMC4-221ENST00000489573 PPP5CP53041 499 aa18.63■□□□□ 0.57
SMC4-221ENST00000489573 ERVS71-1P61550 626 aa18.63■□□□□ 0.57
SMC4-221ENST00000489573 FTMTQ8N4E7 242 aa18.63■□□□□ 0.57
SMC4-221ENST00000489573 OR51D1Q8NGF3 324 aa18.63■□□□□ 0.57
SMC4-221ENST00000489573 OR4D6Q8NGJ1 314 aa18.63■□□□□ 0.57
SMC4-221ENST00000489573 SLC25A40Q8TBP6 338 aa18.63■□□□□ 0.57
SMC4-221ENST00000489573 PIGCQ92535 297 aa18.63■□□□□ 0.57
SMC4-221ENST00000489573 SPACA5Q96QH8 159 aa18.63■□□□□ 0.57
SMC4-221ENST00000489573 BCL2L14Q9BZR8 327 aa18.63■□□□□ 0.57
SMC4-221ENST00000489573 OR2J1Q9GZK6 312 aa18.63■□□□□ 0.57
SMC4-221ENST00000489573 CYSLTR2Q9NS75 346 aa18.63■□□□□ 0.57
SMC4-221ENST00000489573 ERRFI1Q9UJM3 462 aaPredicted RBP18.63■□□□□ 0.57
SMC4-221ENST00000489573 LOC100289279A0A1B0GTE1 492 aa18.62■□□□□ 0.57
SMC4-221ENST00000489573 CST4P01036 141 aa18.62■□□□□ 0.57
SMC4-221ENST00000489573 PRKACBP22694 351 aa18.62■□□□□ 0.57
SMC4-221ENST00000489573 TUBG1P23258 451 aa18.62■□□□□ 0.57
SMC4-221ENST00000489573 CD40LGP29965 261 aa18.62■□□□□ 0.57
SMC4-221ENST00000489573 POU3F4P49335 361 aa18.62■□□□□ 0.57
SMC4-221ENST00000489573 CAPZA1P52907 286 aa18.62■□□□□ 0.57
SMC4-221ENST00000489573 TLE1Q04724 770 aa18.62■□□□□ 0.57
SMC4-221ENST00000489573 RIN1Q13671 783 aa18.62■□□□□ 0.57
SMC4-221ENST00000489573 DMRTC1Q5HYR2 192 aa18.62■□□□□ 0.57
SMC4-221ENST00000489573 MTFR2Q6P444 385 aa18.62■□□□□ 0.57
SMC4-221ENST00000489573 FAM131AQ6UXB0 335 aa18.62■□□□□ 0.57
SMC4-221ENST00000489573 C22orf34Q6ZV56 151 aa18.62■□□□□ 0.57
SMC4-221ENST00000489573 KRT74Q7RTS7 529 aa18.62■□□□□ 0.57
SMC4-221ENST00000489573 LILRB4Q8NHJ6 448 aa18.62■□□□□ 0.57
SMC4-221ENST00000489573 PRR7Q8TB68 274 aa18.62■□□□□ 0.57
SMC4-221ENST00000489573 PAPOLGQ9BWT3 736 aaKnown RBP18.62■□□□□ 0.57
SMC4-221ENST00000489573 TUBG2Q9NRH3 451 aa18.62■□□□□ 0.57
SMC4-221ENST00000489573 EXTL2Q9UBQ6 330 aa18.62■□□□□ 0.57
SMC4-221ENST00000489573 FABP12A6NFH5 140 aa18.61■□□□□ 0.57
SMC4-221ENST00000489573 CRYAAP02489 173 aa18.61■□□□□ 0.57
SMC4-221ENST00000489573 TALDO1P37837 337 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms