RNA–Protein interactions for RNA: ENST00000489403.1

CPSF3-204, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 5

Gene CPSF3, Length 688 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-204ENST00000489403 UBE2FQ969M7 185 aa10.19□□□□□ -0.78
CPSF3-204ENST00000489403 REEP6Q96HR9 211 aa10.19□□□□□ -0.78
CPSF3-204ENST00000489403 PKP2Q99959 881 aa10.19□□□□□ -0.78
CPSF3-204ENST00000489403 NMNAT2Q9BZQ4 307 aa10.19□□□□□ -0.78
CPSF3-204ENST00000489403 TCF7L1Q9HCS4 588 aa10.19□□□□□ -0.78
CPSF3-204ENST00000489403 PRPF19Q9UMS4 504 aaKnown RBP10.19□□□□□ -0.78
CPSF3-204ENST00000489403 SLC22A31A6NKX4 558 aa10.18□□□□□ -0.78
CPSF3-204ENST00000489403 RNASEK-C17orf49H0YIS7 233 aa10.18□□□□□ -0.78
CPSF3-204ENST00000489403 TIPRLO75663 272 aa10.18□□□□□ -0.78
CPSF3-204ENST00000489403 KRT36O76013 467 aa10.18□□□□□ -0.78
CPSF3-204ENST00000489403 CCNB2O95067 398 aa10.18□□□□□ -0.78
CPSF3-204ENST00000489403 FBP1P09467 338 aa10.18□□□□□ -0.78
CPSF3-204ENST00000489403 SELLP14151 372 aa10.18□□□□□ -0.78
CPSF3-204ENST00000489403 HSD11B1P28845 292 aa10.18□□□□□ -0.78
CPSF3-204ENST00000489403 SLC25A1P53007 311 aa10.18□□□□□ -0.78
CPSF3-204ENST00000489403 PPP1R8Q12972 351 aaKnown RBP10.18□□□□□ -0.78
CPSF3-204ENST00000489403 KLRD1Q13241 179 aa10.18□□□□□ -0.78
CPSF3-204ENST00000489403 IKZF1Q13422 519 aa10.18□□□□□ -0.78
CPSF3-204ENST00000489403 EIF2B1Q14232 305 aaKnown RBP10.18□□□□□ -0.78
CPSF3-204ENST00000489403 HSP90B2PQ58FF3 399 aa10.18□□□□□ -0.78
CPSF3-204ENST00000489403 LINC01590Q5TEZ4 76 aa10.18□□□□□ -0.78
CPSF3-204ENST00000489403 STUMQ69YW2 141 aa10.18□□□□□ -0.78
CPSF3-204ENST00000489403 PRSS45Q7RTY3 260 aa10.18□□□□□ -0.78
CPSF3-204ENST00000489403 SLC36A1Q7Z2H8 476 aa10.18□□□□□ -0.78
CPSF3-204ENST00000489403 Q8N7P7 452 aa10.18□□□□□ -0.78
CPSF3-204ENST00000489403 OR6K6Q8NGW6 343 aa10.18□□□□□ -0.78
CPSF3-204ENST00000489403 NPRL2Q8WTW4 380 aa10.18□□□□□ -0.78
CPSF3-204ENST00000489403 SGK3Q96BR1 496 aa10.18□□□□□ -0.78
CPSF3-204ENST00000489403 C12orf43Q96C57 262 aaKnown RBP10.18□□□□□ -0.78
CPSF3-204ENST00000489403 DMRTB1Q96MA1 342 aa10.18□□□□□ -0.78
CPSF3-204ENST00000489403 CDRT15Q96T59 188 aa10.18□□□□□ -0.78
CPSF3-204ENST00000489403 DCTN5Q9BTE1 182 aa10.18□□□□□ -0.78
CPSF3-204ENST00000489403 TSSK6Q9BXA6 273 aa10.18□□□□□ -0.78
CPSF3-204ENST00000489403 TLNRD1Q9H1K6 362 aa10.18□□□□□ -0.78
CPSF3-204ENST00000489403 TOR3AQ9H497 397 aa10.18□□□□□ -0.78
CPSF3-204ENST00000489403 C16orf95Q9H693 158 aa10.18□□□□□ -0.78
CPSF3-204ENST00000489403 ARMC1Q9NVT9 282 aa10.18□□□□□ -0.78
CPSF3-204ENST00000489403 DNAJC27Q9NZQ0 273 aa10.18□□□□□ -0.78
CPSF3-204ENST00000489403 ZNF319Q9P2F9 582 aa10.18□□□□□ -0.78
CPSF3-204ENST00000489403 DNAJB11Q9UBS4 358 aa10.18□□□□□ -0.78
CPSF3-204ENST00000489403 VPREB3Q9UKI3 123 aa10.18□□□□□ -0.78
CPSF3-204ENST00000489403 CAB39Q9Y376 341 aaPredicted RBP10.18□□□□□ -0.78
CPSF3-204ENST00000489403 FAM96BQ9Y3D0 163 aa10.18□□□□□ -0.78
CPSF3-204ENST00000489403 A0A1W2PRD5 423 aa10.17□□□□□ -0.78
CPSF3-204ENST00000489403 A0A1W2PRF3 423 aa10.17□□□□□ -0.78
CPSF3-204ENST00000489403 A0A1W2PRM7 423 aa10.17□□□□□ -0.78
CPSF3-204ENST00000489403 CDIPTO14735 213 aa10.17□□□□□ -0.78
CPSF3-204ENST00000489403 SOX14O95416 240 aa10.17□□□□□ -0.78
CPSF3-204ENST00000489403 SLC15A1P46059 708 aa10.17□□□□□ -0.78
CPSF3-204ENST00000489403 GSK3AP49840 483 aa10.17□□□□□ -0.78
CPSF3-204ENST00000489403 ZNF121P58317 390 aaPredicted RBP10.17□□□□□ -0.78
CPSF3-204ENST00000489403 GFOD2Q3B7J2 385 aa10.17□□□□□ -0.78
CPSF3-204ENST00000489403 DHRS7BQ6IAN0 325 aaPredicted RBP10.17□□□□□ -0.78
CPSF3-204ENST00000489403 FAM57BQ71RH2 274 aa10.17□□□□□ -0.78
CPSF3-204ENST00000489403 C1QL4Q86Z23 238 aa10.17□□□□□ -0.78
CPSF3-204ENST00000489403 LINC00471Q8N535 108 aa10.17□□□□□ -0.78
CPSF3-204ENST00000489403 AQP11Q8NBQ7 271 aa10.17□□□□□ -0.78
CPSF3-204ENST00000489403 OR2T33Q8NG76 320 aa10.17□□□□□ -0.78
CPSF3-204ENST00000489403 OR5T2Q8NGG2 359 aa10.17□□□□□ -0.78
CPSF3-204ENST00000489403 OR6N2Q8NGY6 317 aa10.17□□□□□ -0.78
CPSF3-204ENST00000489403 C8orf46Q8TAG6 207 aa10.17□□□□□ -0.78
CPSF3-204ENST00000489403 RNF133Q8WVZ7 376 aa10.17□□□□□ -0.78
CPSF3-204ENST00000489403 TNFRSF14Q92956 283 aa10.17□□□□□ -0.78
CPSF3-204ENST00000489403 ITPKCQ96DU7 683 aa10.17□□□□□ -0.78
CPSF3-204ENST00000489403 PAPOLGQ9BWT3 736 aaKnown RBP10.17□□□□□ -0.78
CPSF3-204ENST00000489403 BAIAP2Q9UQB8 552 aa10.17□□□□□ -0.78
CPSF3-204ENST00000489403 RHBDD3Q9Y3P4 386 aa10.17□□□□□ -0.78
CPSF3-204ENST00000489403 BTBD17A6NE02 478 aa10.16□□□□□ -0.78
CPSF3-204ENST00000489403 NPFFO15130 113 aa10.16□□□□□ -0.78
CPSF3-204ENST00000489403 GPR37O15354 613 aa10.16□□□□□ -0.78
CPSF3-204ENST00000489403 NDUFB3O43676 98 aa10.16□□□□□ -0.78
CPSF3-204ENST00000489403 SNX3O60493 162 aa10.16□□□□□ -0.78
CPSF3-204ENST00000489403 TSPAN9O75954 239 aa10.16□□□□□ -0.78
CPSF3-204ENST00000489403 TFF1P04155 84 aa10.16□□□□□ -0.78
CPSF3-204ENST00000489403 ATP6V1B2P21281 511 aa10.16□□□□□ -0.78
CPSF3-204ENST00000489403 CFL1P23528 166 aaKnown RBP10.16□□□□□ -0.78
CPSF3-204ENST00000489403 GNALP38405 381 aa10.16□□□□□ -0.78
CPSF3-204ENST00000489403 NAA10P41227 235 aaPredicted RBP10.16□□□□□ -0.78
CPSF3-204ENST00000489403 MAGEA2P43356 314 aa10.16□□□□□ -0.78
CPSF3-204ENST00000489403 TGM4P49221 684 aa10.16□□□□□ -0.78
CPSF3-204ENST00000489403 GMFBP60983 142 aa10.16□□□□□ -0.78
CPSF3-204ENST00000489403 GUCA2AQ02747 115 aa10.16□□□□□ -0.78
CPSF3-204ENST00000489403 LRRC10Q5BKY1 277 aa10.16□□□□□ -0.78
CPSF3-204ENST00000489403 ATPAF1Q5TC12 328 aaPredicted RBP10.16□□□□□ -0.78
CPSF3-204ENST00000489403 CYP2R1Q6VVX0 501 aa10.16□□□□□ -0.78
CPSF3-204ENST00000489403 ERI1Q8IV48 349 aaKnown RBP10.16□□□□□ -0.78
CPSF3-204ENST00000489403 CMTM4Q8IZR5 234 aa10.16□□□□□ -0.78
CPSF3-204ENST00000489403 PNKDQ8N490 385 aa10.16□□□□□ -0.78
CPSF3-204ENST00000489403 GALNT4Q8N4A0 578 aa10.16□□□□□ -0.78
CPSF3-204ENST00000489403 OR52H1Q8NGJ2 320 aa10.16□□□□□ -0.78
CPSF3-204ENST00000489403 FAM110DQ8TAY7 271 aaPredicted RBP10.16□□□□□ -0.78
CPSF3-204ENST00000489403 INTS14Q96SY0 518 aa10.16□□□□□ -0.78
CPSF3-204ENST00000489403 AMELYQ99218 206 aa10.16□□□□□ -0.78
CPSF3-204ENST00000489403 ABHD6Q9BV23 337 aa10.16□□□□□ -0.78
CPSF3-204ENST00000489403 FAM107BQ9H098 131 aa10.16□□□□□ -0.78
CPSF3-204ENST00000489403 WDR13Q9H1Z4 485 aa10.16□□□□□ -0.78
CPSF3-204ENST00000489403 SP140LQ9H930 580 aa10.16□□□□□ -0.78
CPSF3-204ENST00000489403 BRD7Q9NPI1 651 aa10.16□□□□□ -0.78
CPSF3-204ENST00000489403 MED4Q9NPJ6 270 aa10.16□□□□□ -0.78
CPSF3-204ENST00000489403 SNTG1Q9NSN8 517 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms