RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 FBXO17Q96EF6 278 aa16.79■□□□□ 0.28
CCM2-216ENST00000488727 ZNF416Q9BWM5 594 aa16.79■□□□□ 0.28
CCM2-216ENST00000488727 DDX28Q9NUL7 540 aaKnown RBP16.79■□□□□ 0.28
CCM2-216ENST00000488727 COPZ2Q9P299 210 aa16.79■□□□□ 0.28
CCM2-216ENST00000488727 OR5V1Q9UGF6 321 aa16.79■□□□□ 0.28
CCM2-216ENST00000488727 DCHS2Q6V1P9 2916 aa16.78■□□□□ 0.28
CCM2-216ENST00000488727 WNT11O96014 354 aa16.78■□□□□ 0.28
CCM2-216ENST00000488727 CD3GP09693 182 aa16.78■□□□□ 0.28
CCM2-216ENST00000488727 CD79AP11912 226 aa16.78■□□□□ 0.28
CCM2-216ENST00000488727 CRYGSP22914 178 aa16.78■□□□□ 0.28
CCM2-216ENST00000488727 GUCA1AP43080 201 aaPredicted RBP16.78■□□□□ 0.28
CCM2-216ENST00000488727 KLF9Q13886 244 aaPredicted RBP16.78■□□□□ 0.28
CCM2-216ENST00000488727 KCNMB1Q16558 191 aa16.78■□□□□ 0.28
CCM2-216ENST00000488727 MDP1Q86V88 176 aa16.78■□□□□ 0.28
CCM2-216ENST00000488727 RNF170Q96K19 258 aa16.78■□□□□ 0.28
CCM2-216ENST00000488727 ABHD6Q9BV23 337 aa16.78■□□□□ 0.28
CCM2-216ENST00000488727 ZNF275Q9NSD4 429 aaPredicted RBP16.78■□□□□ 0.28
CCM2-216ENST00000488727 NUBP2Q9Y5Y2 271 aa16.78■□□□□ 0.28
CCM2-216ENST00000488727 A8MV72 311 aaPredicted RBP16.77■□□□□ 0.28
CCM2-216ENST00000488727 RGS13O14921 159 aa16.77■□□□□ 0.28
CCM2-216ENST00000488727 MMP7P09237 267 aaPredicted RBP16.77■□□□□ 0.28
CCM2-216ENST00000488727 ZNF83P51522 516 aa16.77■□□□□ 0.28
CCM2-216ENST00000488727 RIDAP52758 137 aaKnown RBP16.77■□□□□ 0.28
CCM2-216ENST00000488727 RRAS2P62070 204 aaPredicted RBP16.77■□□□□ 0.28
CCM2-216ENST00000488727 MRPS10P82664 201 aaKnown RBP16.77■□□□□ 0.28
CCM2-216ENST00000488727 EIF2B1Q14232 305 aaKnown RBP16.77■□□□□ 0.28
CCM2-216ENST00000488727 GSG1Q2KHT4 349 aa16.77■□□□□ 0.28
CCM2-216ENST00000488727 C1QTNF12Q5T7M4 302 aa16.77■□□□□ 0.28
CCM2-216ENST00000488727 KRT74Q7RTS7 529 aa16.77■□□□□ 0.28
CCM2-216ENST00000488727 KRT77Q7Z794 578 aa16.77■□□□□ 0.28
CCM2-216ENST00000488727 ZSCAN2Q7Z7L9 614 aaPredicted RBP16.77■□□□□ 0.28
CCM2-216ENST00000488727 MYPOPQ86VE0 399 aaPredicted RBP16.77■□□□□ 0.28
CCM2-216ENST00000488727 OR10AC1Q8NH08 325 aa16.77■□□□□ 0.28
CCM2-216ENST00000488727 TMEM106AQ96A25 262 aa16.77■□□□□ 0.28
CCM2-216ENST00000488727 HAVCR1Q96D42 359 aa16.77■□□□□ 0.28
CCM2-216ENST00000488727 ZNF75AQ96N20 296 aa16.77■□□□□ 0.28
CCM2-216ENST00000488727 TRAF4Q9BUZ4 470 aaPredicted RBP16.77■□□□□ 0.28
CCM2-216ENST00000488727 RANGRFQ9HD47 186 aaPredicted RBP16.77■□□□□ 0.28
CCM2-216ENST00000488727 KCNN3Q9UGI6 736 aa16.77■□□□□ 0.28
CCM2-216ENST00000488727 HECTD1Q9ULT8 2610 aa16.77■□□□□ 0.27
CCM2-216ENST00000488727 TRAV8-7A0A075B6U6 113 aa16.76■□□□□ 0.27
CCM2-216ENST00000488727 DEFB108AA8MXU0 73 aa16.76■□□□□ 0.27
CCM2-216ENST00000488727 SRSF10O75494 262 aaKnown RBP16.76■□□□□ 0.27
CCM2-216ENST00000488727 HRGP04196 525 aa16.76■□□□□ 0.27
CCM2-216ENST00000488727 CST2P09228 141 aa16.76■□□□□ 0.27
CCM2-216ENST00000488727 SRP9P49458 86 aaKnown RBP16.76■□□□□ 0.27
CCM2-216ENST00000488727 RAB1AP62820 205 aa16.76■□□□□ 0.27
CCM2-216ENST00000488727 IFITM2Q01629 132 aa16.76■□□□□ 0.27
CCM2-216ENST00000488727 SSX8Q7RTT4 187 aa16.76■□□□□ 0.27
CCM2-216ENST00000488727 CATSPERDQ86XM0 798 aa16.76■□□□□ 0.27
CCM2-216ENST00000488727 C15orf40Q8WUR7 153 aa16.76■□□□□ 0.27
CCM2-216ENST00000488727 NANOS1Q8WY41 292 aaKnown RBP16.76■□□□□ 0.27
CCM2-216ENST00000488727 FOXJ3Q9UPW0 622 aa16.76■□□□□ 0.27
CCM2-216ENST00000488727 MRPS7Q9Y2R9 242 aaKnown RBP16.76■□□□□ 0.27
CCM2-216ENST00000488727 C7orf66A4D0T2 115 aa16.76■□□□□ 0.27
CCM2-216ENST00000488727 ANXA2P2A6NMY6 339 aa16.76■□□□□ 0.27
CCM2-216ENST00000488727 GABARAPH6UMI1 98 aa16.76■□□□□ 0.27
CCM2-216ENST00000488727 IGKV3-15P01624 115 aa16.76■□□□□ 0.27
CCM2-216ENST00000488727 ANXA2P07355 339 aaKnown RBP16.76■□□□□ 0.27
CCM2-216ENST00000488727 CELA3BP08861 270 aa16.76■□□□□ 0.27
CCM2-216ENST00000488727 ZNF32P17041 273 aa16.76■□□□□ 0.27
CCM2-216ENST00000488727 RAG2P55895 527 aa16.76■□□□□ 0.27
CCM2-216ENST00000488727 RAB25P57735 213 aa16.76■□□□□ 0.27
CCM2-216ENST00000488727 LSM6P62312 80 aaKnown RBP16.76■□□□□ 0.27
CCM2-216ENST00000488727 OR51A4Q8NGJ6 313 aa16.76■□□□□ 0.27
CCM2-216ENST00000488727 SYNPRQ8TBG9 265 aa16.76■□□□□ 0.27
CCM2-216ENST00000488727 AKAP1Q92667 903 aaKnown RBP eCLIP16.76■□□□□ 0.27
CCM2-216ENST00000488727 S100A16Q96FQ6 103 aaKnown RBP16.76■□□□□ 0.27
CCM2-216ENST00000488727 STEAP1Q9UHE8 339 aa16.76■□□□□ 0.27
CCM2-216ENST00000488727 LRP12Q9Y561 859 aa16.76■□□□□ 0.27
CCM2-216ENST00000488727 CADP27708 2225 aa16.76■□□□□ 0.27
CCM2-216ENST00000488727 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP16.75■□□□□ 0.27
CCM2-216ENST00000488727 DHFRP00374 187 aa16.75■□□□□ 0.27
CCM2-216ENST00000488727 PNPP00491 289 aa16.75■□□□□ 0.27
CCM2-216ENST00000488727 IGLV1-44P01699 117 aa16.75■□□□□ 0.27
CCM2-216ENST00000488727 CBR1P16152 277 aa16.75■□□□□ 0.27
CCM2-216ENST00000488727 GDNFP39905 211 aa16.75■□□□□ 0.27
CCM2-216ENST00000488727 ART1P52961 327 aa16.75■□□□□ 0.27
CCM2-216ENST00000488727 DAZAP2Q15038 168 aaPredicted RBP16.75■□□□□ 0.27
CCM2-216ENST00000488727 DEGS2Q6QHC5 323 aa16.75■□□□□ 0.27
CCM2-216ENST00000488727 CDH24Q86UP0 819 aa16.75■□□□□ 0.27
CCM2-216ENST00000488727 NOXA1Q86UR1 476 aa16.75■□□□□ 0.27
CCM2-216ENST00000488727 TSEN15Q8WW01 171 aaKnown RBP16.75■□□□□ 0.27
CCM2-216ENST00000488727 ITFG2Q969R8 447 aa16.75■□□□□ 0.27
CCM2-216ENST00000488727 DMRTB1Q96MA1 342 aa16.75■□□□□ 0.27
CCM2-216ENST00000488727 FYTTD1Q96QD9 318 aaKnown RBP16.75■□□□□ 0.27
CCM2-216ENST00000488727 ASH2LQ9UBL3 628 aa16.75■□□□□ 0.27
CCM2-216ENST00000488727 RBMX2Q9Y388 322 aaKnown RBP16.75■□□□□ 0.27
CCM2-216ENST00000488727 LHFPL6Q9Y693 200 aa16.75■□□□□ 0.27
CCM2-216ENST00000488727 R4GMQ9 66 aa16.75■□□□□ 0.27
CCM2-216ENST00000488727 HRNRQ86YZ3 2850 aaPredicted RBP16.74■□□□□ 0.27
CCM2-216ENST00000488727 IGHV1-18A0A0C4DH31 117 aa16.74■□□□□ 0.27
CCM2-216ENST00000488727 DPRXA6NFQ7 191 aa16.74■□□□□ 0.27
CCM2-216ENST00000488727 M0R1B8 84 aa16.74■□□□□ 0.27
CCM2-216ENST00000488727 ECDO95905 644 aaPredicted RBP16.74■□□□□ 0.27
CCM2-216ENST00000488727 TCRBP04435 133 aa16.74■□□□□ 0.27
CCM2-216ENST00000488727 ZNF823P16415 610 aa16.74■□□□□ 0.27
CCM2-216ENST00000488727 FSTP19883 344 aa16.74■□□□□ 0.27
CCM2-216ENST00000488727 LOXP28300 417 aaPredicted RBP16.74■□□□□ 0.27
CCM2-216ENST00000488727 PTH2RP49190 550 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms