RNA–Protein interactions for RNA: ENST00000488591.1

CXCL12-207, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 2

Gene CXCL12, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-207ENST00000488591 ZNF684Q5T5D7 378 aa12.69□□□□□ -0.38
CXCL12-207ENST00000488591 ZNF691Q5VV52 312 aa12.69□□□□□ -0.38
CXCL12-207ENST00000488591 PRAMEF6Q5VXH4 476 aa12.69□□□□□ -0.38
CXCL12-207ENST00000488591 LIPNQ5VXI9 398 aa12.69□□□□□ -0.38
CXCL12-207ENST00000488591 ELMOD2Q8IZ81 293 aa12.69□□□□□ -0.38
CXCL12-207ENST00000488591 MUC20Q8N307 709 aaPredicted RBP12.69□□□□□ -0.38
CXCL12-207ENST00000488591 KLHL36Q8N4N3 616 aa12.69□□□□□ -0.38
CXCL12-207ENST00000488591 SPICQ8N5J4 248 aa12.69□□□□□ -0.38
CXCL12-207ENST00000488591 SEMA6DQ8NFY4 1073 aa12.69□□□□□ -0.38
CXCL12-207ENST00000488591 Q8TCH9 128 aa12.69□□□□□ -0.38
CXCL12-207ENST00000488591 PIGCQ92535 297 aa12.69□□□□□ -0.38
CXCL12-207ENST00000488591 LGALS12Q96DT0 336 aa12.69□□□□□ -0.38
CXCL12-207ENST00000488591 C1orf159Q96HA4 380 aa12.69□□□□□ -0.38
CXCL12-207ENST00000488591 FAM71F1Q96KD3 344 aaPredicted RBP12.69□□□□□ -0.38
CXCL12-207ENST00000488591 MICU1Q9BPX6 476 aa12.69□□□□□ -0.38
CXCL12-207ENST00000488591 G6PC2Q9NQR9 355 aa12.69□□□□□ -0.38
CXCL12-207ENST00000488591 GPR84Q9NQS5 396 aa12.69□□□□□ -0.38
CXCL12-207ENST00000488591 UFSP2Q9NUQ7 469 aa12.69□□□□□ -0.38
CXCL12-207ENST00000488591 DCAF16Q9NXF7 216 aa12.69□□□□□ -0.38
CXCL12-207ENST00000488591 UBAP1Q9NZ09 502 aa12.69□□□□□ -0.38
CXCL12-207ENST00000488591 ZNF816-ZNF321PA0A0X1KG74 233 aa12.68□□□□□ -0.38
CXCL12-207ENST00000488591 A6NLC8 198 aa12.68□□□□□ -0.38
CXCL12-207ENST00000488591 H0YAE9 185 aa12.68□□□□□ -0.38
CXCL12-207ENST00000488591 J3QRE1 110 aa12.68□□□□□ -0.38
CXCL12-207ENST00000488591 PTBP3O95758 552 aaKnown RBP12.68□□□□□ -0.38
CXCL12-207ENST00000488591 CYB5R3P00387 301 aaPredicted RBP12.68□□□□□ -0.38
CXCL12-207ENST00000488591 TTRP02766 147 aa12.68□□□□□ -0.38
CXCL12-207ENST00000488591 ACKR3P25106 362 aa12.68□□□□□ -0.38
CXCL12-207ENST00000488591 MDH2P40926 338 aaKnown RBP12.68□□□□□ -0.38
CXCL12-207ENST00000488591 ACTA2P62736 377 aa12.68□□□□□ -0.38
CXCL12-207ENST00000488591 ACTG2P63267 376 aa12.68□□□□□ -0.38
CXCL12-207ENST00000488591 RIPPLY1Q0D2K3 151 aa12.68□□□□□ -0.38
CXCL12-207ENST00000488591 PRDX4Q13162 271 aa12.68□□□□□ -0.38
CXCL12-207ENST00000488591 MPPED2Q15777 294 aa12.68□□□□□ -0.38
CXCL12-207ENST00000488591 TMEM155Q4W5P6 130 aa12.68□□□□□ -0.38
CXCL12-207ENST00000488591 TP53I3Q53FA7 332 aa12.68□□□□□ -0.38
CXCL12-207ENST00000488591 ZBTB37Q5TC79 503 aa12.68□□□□□ -0.38
CXCL12-207ENST00000488591 LRRC28Q86X40 367 aaPredicted RBP12.68□□□□□ -0.38
CXCL12-207ENST00000488591 DVL3Q92997 716 aaPredicted RBP12.68□□□□□ -0.38
CXCL12-207ENST00000488591 PPP1R14AQ96A00 147 aa12.68□□□□□ -0.38
CXCL12-207ENST00000488591 SOX7Q9BT81 388 aa12.68□□□□□ -0.38
CXCL12-207ENST00000488591 ADI1Q9BV57 179 aa12.68□□□□□ -0.38
CXCL12-207ENST00000488591 RTL8AQ9BWD3 113 aa12.68□□□□□ -0.38
CXCL12-207ENST00000488591 AMBNQ9NP70 447 aa12.68□□□□□ -0.38
CXCL12-207ENST00000488591 INPP5EQ9NRR6 644 aa12.68□□□□□ -0.38
CXCL12-207ENST00000488591 RNF7Q9UBF6 113 aa12.68□□□□□ -0.38
CXCL12-207ENST00000488591 NSD1Q96L73 2696 aaPredicted RBP12.68□□□□□ -0.38
CXCL12-207ENST00000488591 NIPBLQ6KC79 2804 aaeCLIP12.67□□□□□ -0.38
CXCL12-207ENST00000488591 PPIAL4EA0A075B759 164 aa12.67□□□□□ -0.38
CXCL12-207ENST00000488591 IRGMA1A4Y4 181 aa12.67□□□□□ -0.38
CXCL12-207ENST00000488591 ZNF850A8MQ14 1090 aa12.67□□□□□ -0.38
CXCL12-207ENST00000488591 PPIAL4DF5H284 164 aa12.67□□□□□ -0.38
CXCL12-207ENST00000488591 FAM20BO75063 409 aa12.67□□□□□ -0.38
CXCL12-207ENST00000488591 DHRS3O75911 302 aa12.67□□□□□ -0.38
CXCL12-207ENST00000488591 CLIC3O95833 236 aa12.67□□□□□ -0.38
CXCL12-207ENST00000488591 IGLV3-1P01715 115 aa12.67□□□□□ -0.38
CXCL12-207ENST00000488591 IGHV2-5P01817 119 aa12.67□□□□□ -0.38
CXCL12-207ENST00000488591 PPIAL4FP0DN26 164 aa12.67□□□□□ -0.38
CXCL12-207ENST00000488591 PCMT1P22061 227 aa12.67□□□□□ -0.38
CXCL12-207ENST00000488591 CAPGP40121 348 aa12.67□□□□□ -0.38
CXCL12-207ENST00000488591 PMELP40967 661 aa12.67□□□□□ -0.38
CXCL12-207ENST00000488591 ADARB1P78563 741 aaKnown RBP12.67□□□□□ -0.38
CXCL12-207ENST00000488591 ZMYND11Q15326 602 aa12.67□□□□□ -0.38
CXCL12-207ENST00000488591 CDONQ4KMG0 1287 aa12.67□□□□□ -0.38
CXCL12-207ENST00000488591 DOK3Q7L591 496 aa12.67□□□□□ -0.38
CXCL12-207ENST00000488591 CATSPERDQ86XM0 798 aa12.67□□□□□ -0.38
CXCL12-207ENST00000488591 ZDHHC23Q8IYP9 409 aa12.67□□□□□ -0.38
CXCL12-207ENST00000488591 OR51F2Q8NH61 342 aa12.67□□□□□ -0.38
CXCL12-207ENST00000488591 APH1BQ8WW43 257 aa12.67□□□□□ -0.38
CXCL12-207ENST00000488591 RORBQ92753 470 aa12.67□□□□□ -0.38
CXCL12-207ENST00000488591 RNPEPL1Q9HAU8 725 aa12.67□□□□□ -0.38
CXCL12-207ENST00000488591 MRPS18AQ9NVS2 196 aaKnown RBP12.67□□□□□ -0.38
CXCL12-207ENST00000488591 C1orf123Q9NWV4 160 aa12.67□□□□□ -0.38
CXCL12-207ENST00000488591 TMEM160Q9NX00 188 aa12.67□□□□□ -0.38
CXCL12-207ENST00000488591 NKX1-2Q9UD57 310 aaPredicted RBP12.67□□□□□ -0.38
CXCL12-207ENST00000488591 ENPP5Q9UJA9 477 aa12.67□□□□□ -0.38
CXCL12-207ENST00000488591 PIGLQ9Y2B2 252 aa12.67□□□□□ -0.38
CXCL12-207ENST00000488591 PPIAL4AQ9Y536 164 aa12.67□□□□□ -0.38
CXCL12-207ENST00000488591 HSPE1-MOB4S4R3N1 261 aa12.67□□□□□ -0.38
CXCL12-207ENST00000488591 A0A1B0GVI7 797 aa12.66□□□□□ -0.38
CXCL12-207ENST00000488591 hCG_1807616A0A1W2PRN6 198 aa12.66□□□□□ -0.38
CXCL12-207ENST00000488591 FAM157AC9JC47 383 aa12.66□□□□□ -0.38
CXCL12-207ENST00000488591 J3QLW9 94 aa12.66□□□□□ -0.38
CXCL12-207ENST00000488591 P2RY10O00398 339 aa12.66□□□□□ -0.38
CXCL12-207ENST00000488591 WBP4O75554 376 aaKnown RBP12.66□□□□□ -0.38
CXCL12-207ENST00000488591 FSTL3O95633 263 aa12.66□□□□□ -0.38
CXCL12-207ENST00000488591 MSMBP08118 114 aa12.66□□□□□ -0.38
CXCL12-207ENST00000488591 ZNF19P17023 458 aa12.66□□□□□ -0.38
CXCL12-207ENST00000488591 CPT2P23786 658 aa12.66□□□□□ -0.38
CXCL12-207ENST00000488591 DVL1P1P54792 670 aaPredicted RBP12.66□□□□□ -0.38
CXCL12-207ENST00000488591 GALEQ14376 348 aa12.66□□□□□ -0.38
CXCL12-207ENST00000488591 KCTD8Q6ZWB6 473 aa12.66□□□□□ -0.38
CXCL12-207ENST00000488591 ZNF771Q7L3S4 317 aaPredicted RBP12.66□□□□□ -0.38
CXCL12-207ENST00000488591 LHFPL3Q86UP9 236 aa12.66□□□□□ -0.38
CXCL12-207ENST00000488591 GLCCI1Q86VQ1 547 aa12.66□□□□□ -0.38
CXCL12-207ENST00000488591 EGFL6Q8IUX8 553 aa12.66□□□□□ -0.38
CXCL12-207ENST00000488591 C8orf59Q8N0T1 100 aaPredicted RBP12.66□□□□□ -0.38
CXCL12-207ENST00000488591 CCDC54Q8NEL0 328 aa12.66□□□□□ -0.38
CXCL12-207ENST00000488591 OR1M1Q8NGA1 313 aa12.66□□□□□ -0.38
CXCL12-207ENST00000488591 ITPKCQ96DU7 683 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms