RNA–Protein interactions for RNA: ENST00000488454.5

SKA1-204, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 3 BASIC

Gene SKA1, Length 669 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-204ENST00000488454 ACHEP22303 614 aa8.78□□□□□ -1
SKA1-204ENST00000488454 CDKN1AP38936 164 aa8.78□□□□□ -1
SKA1-204ENST00000488454 MMP15P51511 669 aa8.78□□□□□ -1
SKA1-204ENST00000488454 EMX1Q04741 257 aaPredicted RBP8.78□□□□□ -1
SKA1-204ENST00000488454 MZT1Q08AG7 82 aa8.78□□□□□ -1
SKA1-204ENST00000488454 ACSM1Q08AH1 577 aa8.78□□□□□ -1
SKA1-204ENST00000488454 DOC2BQ14184 412 aa8.78□□□□□ -1
SKA1-204ENST00000488454 OR8G1Q15617 311 aa8.78□□□□□ -1
SKA1-204ENST00000488454 TBCEQ15813 527 aaPredicted RBP8.78□□□□□ -1
SKA1-204ENST00000488454 TSTQ16762 297 aaKnown RBP8.78□□□□□ -1
SKA1-204ENST00000488454 C11orf71Q6IPW1 123 aa8.78□□□□□ -1
SKA1-204ENST00000488454 ZNF367Q7RTV3 350 aa8.78□□□□□ -1
SKA1-204ENST00000488454 ZFP41Q8N8Y5 198 aa8.78□□□□□ -1
SKA1-204ENST00000488454 SPERTQ8NA61 448 aa8.78□□□□□ -1
SKA1-204ENST00000488454 ZNF485Q8NCK3 441 aa8.78□□□□□ -1
SKA1-204ENST00000488454 TSPAN14Q8NG11 270 aa8.78□□□□□ -1
SKA1-204ENST00000488454 OR2Z1Q8NG97 314 aa8.78□□□□□ -1
SKA1-204ENST00000488454 OR13C3Q8NGS6 347 aa8.78□□□□□ -1
SKA1-204ENST00000488454 NEU4Q8WWR8 484 aaPredicted RBP8.78□□□□□ -1
SKA1-204ENST00000488454 PIGCQ92535 297 aa8.78□□□□□ -1
SKA1-204ENST00000488454 FCGR1BQ92637 280 aa8.78□□□□□ -1
SKA1-204ENST00000488454 GHSRQ92847 366 aa8.78□□□□□ -1
SKA1-204ENST00000488454 UFD1Q92890 307 aa8.78□□□□□ -1
SKA1-204ENST00000488454 SMIM19Q96E16 107 aa8.78□□□□□ -1
SKA1-204ENST00000488454 OR5M11Q96RB7 305 aa8.78□□□□□ -1
SKA1-204ENST00000488454 PDCD1LG2Q9BQ51 273 aa8.78□□□□□ -1
SKA1-204ENST00000488454 SLC30A2Q9BRI3 323 aa8.78□□□□□ -1
SKA1-204ENST00000488454 PAPOLGQ9BWT3 736 aaKnown RBP8.78□□□□□ -1
SKA1-204ENST00000488454 EGLN1Q9GZT9 426 aa8.78□□□□□ -1
SKA1-204ENST00000488454 VCX3AQ9NNX9 186 aa8.78□□□□□ -1
SKA1-204ENST00000488454 ABCB9Q9NP78 766 aa8.78□□□□□ -1
SKA1-204ENST00000488454 ISYNA1Q9NPH2 558 aa8.78□□□□□ -1
SKA1-204ENST00000488454 ACOT13Q9NPJ3 140 aa8.78□□□□□ -1
SKA1-204ENST00000488454 BEX4Q9NWD9 120 aaPredicted RBP8.78□□□□□ -1
SKA1-204ENST00000488454 ENPP5Q9UJA9 477 aa8.78□□□□□ -1
SKA1-204ENST00000488454 PIGLQ9Y2B2 252 aa8.78□□□□□ -1
SKA1-204ENST00000488454 ZNF281Q9Y2X9 895 aa8.78□□□□□ -1
SKA1-204ENST00000488454 PTPN13Q12923 2485 aa8.78□□□□□ -1
SKA1-204ENST00000488454 HECTD1Q9ULT8 2610 aa8.77□□□□□ -1.01
SKA1-204ENST00000488454 A0A1B0GTI1 187 aa8.77□□□□□ -1.01
SKA1-204ENST00000488454 ANXA2P2A6NMY6 339 aa8.77□□□□□ -1.01
SKA1-204ENST00000488454 DHRS7CA6NNS2 312 aa8.77□□□□□ -1.01
SKA1-204ENST00000488454 H7C417 338 aa8.77□□□□□ -1.01
SKA1-204ENST00000488454 OVOL3O00110 214 aa8.77□□□□□ -1.01
SKA1-204ENST00000488454 EREGO14944 169 aa8.77□□□□□ -1.01
SKA1-204ENST00000488454 PLPP2O43688 288 aa8.77□□□□□ -1.01
SKA1-204ENST00000488454 GMDSO60547 372 aa8.77□□□□□ -1.01
SKA1-204ENST00000488454 CST4P01036 141 aa8.77□□□□□ -1.01
SKA1-204ENST00000488454 IGLV3-1P01715 115 aa8.77□□□□□ -1.01
SKA1-204ENST00000488454 OCM2P0CE71 109 aa8.77□□□□□ -1.01
SKA1-204ENST00000488454 OCMP0CE72 109 aaPredicted RBP8.77□□□□□ -1.01
SKA1-204ENST00000488454 ZNF20P17024 532 aa8.77□□□□□ -1.01
SKA1-204ENST00000488454 CCL1P22362 96 aa8.77□□□□□ -1.01
SKA1-204ENST00000488454 CA6P23280 308 aa8.77□□□□□ -1.01
SKA1-204ENST00000488454 ANOS1P23352 680 aa8.77□□□□□ -1.01
SKA1-204ENST00000488454 TNFAIP6P98066 277 aaPredicted RBP8.77□□□□□ -1.01
SKA1-204ENST00000488454 MLLT11Q13015 90 aaPredicted RBP8.77□□□□□ -1.01
SKA1-204ENST00000488454 GPR50Q13585 617 aa8.77□□□□□ -1.01
SKA1-204ENST00000488454 OR8B8Q15620 311 aa8.77□□□□□ -1.01
SKA1-204ENST00000488454 FAM209AQ5JX71 171 aa8.77□□□□□ -1.01
SKA1-204ENST00000488454 ZBTB37Q5TC79 503 aa8.77□□□□□ -1.01
SKA1-204ENST00000488454 DMKNQ6E0U4 476 aaPredicted RBP8.77□□□□□ -1.01
SKA1-204ENST00000488454 XAF1Q6GPH4 301 aa8.77□□□□□ -1.01
SKA1-204ENST00000488454 CDH24Q86UP0 819 aa8.77□□□□□ -1.01
SKA1-204ENST00000488454 ZCCHC24Q8N2G6 241 aaKnown RBP8.77□□□□□ -1.01
SKA1-204ENST00000488454 OR14K1Q8NGZ2 314 aa8.77□□□□□ -1.01
SKA1-204ENST00000488454 OR8S1Q8NH09 359 aa8.77□□□□□ -1.01
SKA1-204ENST00000488454 GPR148Q8TDV2 347 aa8.77□□□□□ -1.01
SKA1-204ENST00000488454 TSEN15Q8WW01 171 aaKnown RBP8.77□□□□□ -1.01
SKA1-204ENST00000488454 C10orf35Q96D05 121 aa8.77□□□□□ -1.01
SKA1-204ENST00000488454 ELMOD3Q96FG2 381 aa8.77□□□□□ -1.01
SKA1-204ENST00000488454 MGLLQ99685 303 aa8.77□□□□□ -1.01
SKA1-204ENST00000488454 SOX7Q9BT81 388 aa8.77□□□□□ -1.01
SKA1-204ENST00000488454 TPK1Q9H3S4 243 aa8.77□□□□□ -1.01
SKA1-204ENST00000488454 ZNF696Q9H7X3 374 aa8.77□□□□□ -1.01
SKA1-204ENST00000488454 BARX1Q9HBU1 254 aaPredicted RBP8.77□□□□□ -1.01
SKA1-204ENST00000488454 NKIRAS2Q9NYR9 191 aa8.77□□□□□ -1.01
SKA1-204ENST00000488454 DHDHQ9UQ10 334 aa8.77□□□□□ -1.01
SKA1-204ENST00000488454 LSM2Q9Y333 95 aaKnown RBP8.77□□□□□ -1.01
SKA1-204ENST00000488454 RHBDD3Q9Y3P4 386 aa8.77□□□□□ -1.01
SKA1-204ENST00000488454 MPC1Q9Y5U8 109 aa8.77□□□□□ -1.01
SKA1-204ENST00000488454 V9GYS6 101 aa8.77□□□□□ -1.01
SKA1-204ENST00000488454 ROS1P08922 2347 aa8.77□□□□□ -1.01
SKA1-204ENST00000488454 ZSCAN5BA6NJL1 495 aa8.76□□□□□ -1.01
SKA1-204ENST00000488454 ZNF850A8MQ14 1090 aa8.76□□□□□ -1.01
SKA1-204ENST00000488454 LALBAP00709 142 aa8.76□□□□□ -1.01
SKA1-204ENST00000488454 NRASP01111 189 aa8.76□□□□□ -1.01
SKA1-204ENST00000488454 IGHV1-46P01743 117 aa8.76□□□□□ -1.01
SKA1-204ENST00000488454 HLA-DPB1P04440 258 aa8.76□□□□□ -1.01
SKA1-204ENST00000488454 CD1AP06126 327 aa8.76□□□□□ -1.01
SKA1-204ENST00000488454 CD2P06729 351 aa8.76□□□□□ -1.01
SKA1-204ENST00000488454 FAHP16930 419 aa8.76□□□□□ -1.01
SKA1-204ENST00000488454 ACKR3P25106 362 aa8.76□□□□□ -1.01
SKA1-204ENST00000488454 PSMB9P28065 219 aa8.76□□□□□ -1.01
SKA1-204ENST00000488454 SRP9P49458 86 aaKnown RBP8.76□□□□□ -1.01
SKA1-204ENST00000488454 EFNA4P52798 201 aa8.76□□□□□ -1.01
SKA1-204ENST00000488454 ATP5J2P56134 94 aa8.76□□□□□ -1.01
SKA1-204ENST00000488454 CCL8P80075 99 aa8.76□□□□□ -1.01
SKA1-204ENST00000488454 DEFB113Q30KQ7 82 aa8.76□□□□□ -1.01
SKA1-204ENST00000488454 YIF1BQ5BJH7 314 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms