RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 OR56A4Q8NGH8 313 aa2.53□□□□□ -2
ITGB1-214ENST00000488427 STMN2Q93045 179 aa2.53□□□□□ -2
ITGB1-214ENST00000488427 ZNF607Q96SK3 696 aa2.53□□□□□ -2
ITGB1-214ENST00000488427 KCTD14Q9BQ13 255 aaPredicted RBP2.53□□□□□ -2
ITGB1-214ENST00000488427 NDFIP1Q9BT67 221 aa2.53□□□□□ -2
ITGB1-214ENST00000488427 SCRT1Q9BWW7 348 aa2.53□□□□□ -2
ITGB1-214ENST00000488427 RMND5AQ9H871 391 aa2.53□□□□□ -2
ITGB1-214ENST00000488427 CGNQ9P2M7 1197 aaKnown RBP2.53□□□□□ -2
ITGB1-214ENST00000488427 KIAA1109Q2LD37 5005 aa2.53□□□□□ -2
ITGB1-214ENST00000488427 DNAH1Q9P2D7 4330 aa2.53□□□□□ -2
ITGB1-214ENST00000488427 CMYA5Q8N3K9 4069 aa2.52□□□□□ -2.01
ITGB1-214ENST00000488427 DYNC1I1O14576 645 aa2.52□□□□□ -2.01
ITGB1-214ENST00000488427 NDC80O14777 642 aa2.52□□□□□ -2.01
ITGB1-214ENST00000488427 ARPC3O15145 178 aa2.52□□□□□ -2.01
ITGB1-214ENST00000488427 TOX3O15405 576 aaPredicted RBP2.52□□□□□ -2.01
ITGB1-214ENST00000488427 SLC37A4O43826 429 aa2.52□□□□□ -2.01
ITGB1-214ENST00000488427 PALMO75781 387 aa2.52□□□□□ -2.01
ITGB1-214ENST00000488427 BGLAPP02818 100 aa2.52□□□□□ -2.01
ITGB1-214ENST00000488427 CAPN1P07384 714 aa2.52□□□□□ -2.01
ITGB1-214ENST00000488427 OMGP23515 440 aa2.52□□□□□ -2.01
ITGB1-214ENST00000488427 RORAP35398 523 aa2.52□□□□□ -2.01
ITGB1-214ENST00000488427 UGT2B15P54855 530 aa2.52□□□□□ -2.01
ITGB1-214ENST00000488427 FGL1Q08830 312 aa2.52□□□□□ -2.01
ITGB1-214ENST00000488427 ELP6Q0PNE2 266 aa2.52□□□□□ -2.01
ITGB1-214ENST00000488427 MADCAM1Q13477 382 aa2.52□□□□□ -2.01
ITGB1-214ENST00000488427 ARHGAP19Q14CB8 494 aa2.52□□□□□ -2.01
ITGB1-214ENST00000488427 PDK3Q15120 406 aa2.52□□□□□ -2.01
ITGB1-214ENST00000488427 SGCAQ16586 387 aa2.52□□□□□ -2.01
ITGB1-214ENST00000488427 DUSP7Q16829 419 aa2.52□□□□□ -2.01
ITGB1-214ENST00000488427 KCTD21Q4G0X4 260 aa2.52□□□□□ -2.01
ITGB1-214ENST00000488427 ATAD3BQ5T9A4 648 aa2.52□□□□□ -2.01
ITGB1-214ENST00000488427 CES3Q6UWW8 571 aa2.52□□□□□ -2.01
ITGB1-214ENST00000488427 RPRMLQ8N4K4 120 aa2.52□□□□□ -2.01
ITGB1-214ENST00000488427 UBALD1Q8TB05 177 aa2.52□□□□□ -2.01
ITGB1-214ENST00000488427 LINC01560Q8TB33 94 aa2.52□□□□□ -2.01
ITGB1-214ENST00000488427 FAM57AQ8TBR7 257 aa2.52□□□□□ -2.01
ITGB1-214ENST00000488427 SLC37A2Q8TED4 501 aa2.52□□□□□ -2.01
ITGB1-214ENST00000488427 EMG1Q92979 244 aaKnown RBP2.52□□□□□ -2.01
ITGB1-214ENST00000488427 RNASE6Q93091 150 aaKnown RBP2.52□□□□□ -2.01
ITGB1-214ENST00000488427 SMARCD1Q96GM5 515 aa2.52□□□□□ -2.01
ITGB1-214ENST00000488427 TTC25Q96NG3 672 aa2.52□□□□□ -2.01
ITGB1-214ENST00000488427 COL21A1Q96P44 957 aa2.52□□□□□ -2.01
ITGB1-214ENST00000488427 CCT7Q99832 543 aa2.52□□□□□ -2.01
ITGB1-214ENST00000488427 MED10Q9BTT4 135 aa2.52□□□□□ -2.01
ITGB1-214ENST00000488427 PARD6BQ9BYG5 372 aa2.52□□□□□ -2.01
ITGB1-214ENST00000488427 ASB7Q9H672 318 aa2.52□□□□□ -2.01
ITGB1-214ENST00000488427 CALYQ9NYX4 217 aa2.52□□□□□ -2.01
ITGB1-214ENST00000488427 POLDIP2Q9Y2S7 368 aa2.52□□□□□ -2.01
ITGB1-214ENST00000488427 NCKAP5O14513 1909 aa2.52□□□□□ -2.01
ITGB1-214ENST00000488427 ABCA13Q86UQ4 5058 aa2.51□□□□□ -2.01
ITGB1-214ENST00000488427 A0A0B4J2A0 478 aa2.51□□□□□ -2.01
ITGB1-214ENST00000488427 METTL21EPA6NDL7 271 aa2.51□□□□□ -2.01
ITGB1-214ENST00000488427 SLC16A4O15374 487 aa2.51□□□□□ -2.01
ITGB1-214ENST00000488427 GMFGO60234 142 aa2.51□□□□□ -2.01
ITGB1-214ENST00000488427 KLF7O75840 302 aaPredicted RBP2.51□□□□□ -2.01
ITGB1-214ENST00000488427 CTDNEP1O95476 244 aa2.51□□□□□ -2.01
ITGB1-214ENST00000488427 MRPL3P09001 348 aaKnown RBP2.51□□□□□ -2.01
ITGB1-214ENST00000488427 NELFEP18615 380 aaKnown RBP2.51□□□□□ -2.01
ITGB1-214ENST00000488427 PCMT1P22061 227 aa2.51□□□□□ -2.01
ITGB1-214ENST00000488427 WARSP23381 471 aaKnown RBP2.51□□□□□ -2.01
ITGB1-214ENST00000488427 AK4P27144 223 aaPredicted RBP2.51□□□□□ -2.01
ITGB1-214ENST00000488427 KLHL40Q2TBA0 621 aa2.51□□□□□ -2.01
ITGB1-214ENST00000488427 SFT2D3Q587I9 215 aa2.51□□□□□ -2.01
ITGB1-214ENST00000488427 DMRTC1Q5HYR2 192 aa2.51□□□□□ -2.01
ITGB1-214ENST00000488427 CFAP157Q5JU67 520 aa2.51□□□□□ -2.01
ITGB1-214ENST00000488427 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.51□□□□□ -2.01
ITGB1-214ENST00000488427 PP632Q6XCG6 107 aa2.51□□□□□ -2.01
ITGB1-214ENST00000488427 TMEM123Q8N131 208 aa2.51□□□□□ -2.01
ITGB1-214ENST00000488427 ACTRT1Q8TDG2 376 aa2.51□□□□□ -2.01
ITGB1-214ENST00000488427 CXorf40AQ8TE69 158 aa2.51□□□□□ -2.01
ITGB1-214ENST00000488427 ZNF418Q8TF45 676 aaPredicted RBP2.51□□□□□ -2.01
ITGB1-214ENST00000488427 DEDD2Q8WXF8 326 aa2.51□□□□□ -2.01
ITGB1-214ENST00000488427 AURKBQ96GD4 344 aaPredicted RBP2.51□□□□□ -2.01
ITGB1-214ENST00000488427 ZNF514Q96K75 400 aaPredicted RBP2.51□□□□□ -2.01
ITGB1-214ENST00000488427 LYSTQ99698 3801 aa2.51□□□□□ -2.01
ITGB1-214ENST00000488427 RSPO3Q9BXY4 272 aaPredicted RBP2.51□□□□□ -2.01
ITGB1-214ENST00000488427 RAB33BQ9H082 229 aa2.51□□□□□ -2.01
ITGB1-214ENST00000488427 RNF167Q9H6Y7 350 aa2.51□□□□□ -2.01
ITGB1-214ENST00000488427 PALMDQ9NP74 551 aa2.51□□□□□ -2.01
ITGB1-214ENST00000488427 SAMSN1Q9NSI8 373 aaKnown RBP2.51□□□□□ -2.01
ITGB1-214ENST00000488427 XCL2Q9UBD3 114 aa2.51□□□□□ -2.01
ITGB1-214ENST00000488427 SHPKQ9UHJ6 478 aa2.51□□□□□ -2.01
ITGB1-214ENST00000488427 CD84Q9UIB8 345 aa2.51□□□□□ -2.01
ITGB1-214ENST00000488427 STOML2Q9UJZ1 356 aa2.51□□□□□ -2.01
ITGB1-214ENST00000488427 FRAS1Q86XX4 4008 aa2.51□□□□□ -2.01
ITGB1-214ENST00000488427 SNRNP200O75643 2136 aaKnown RBP2.5□□□□□ -2.01
ITGB1-214ENST00000488427 RAMP3O60896 148 aa2.5□□□□□ -2.01
ITGB1-214ENST00000488427 UPK3AO75631 287 aa2.5□□□□□ -2.01
ITGB1-214ENST00000488427 IGHV3-43DP0DP04 118 aa2.5□□□□□ -2.01
ITGB1-214ENST00000488427 FOLR1P15328 257 aa2.5□□□□□ -2.01
ITGB1-214ENST00000488427 ACTR1BP42025 376 aa2.5□□□□□ -2.01
ITGB1-214ENST00000488427 CRISP3P54108 245 aa2.5□□□□□ -2.01
ITGB1-214ENST00000488427 MAP3K7CLP57077 242 aa2.5□□□□□ -2.01
ITGB1-214ENST00000488427 ACTR1AP61163 376 aa2.5□□□□□ -2.01
ITGB1-214ENST00000488427 RPS24P62847 133 aaKnown RBP2.5□□□□□ -2.01
ITGB1-214ENST00000488427 TFAMQ00059 246 aaKnown RBP2.5□□□□□ -2.01
ITGB1-214ENST00000488427 ACVR1Q04771 509 aa2.5□□□□□ -2.01
ITGB1-214ENST00000488427 FBXL19-AS1Q494R0 122 aa2.5□□□□□ -2.01
ITGB1-214ENST00000488427 MLIPQ5VWP3 458 aa2.5□□□□□ -2.01
ITGB1-214ENST00000488427 SCD5Q86SK9 330 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms