RNA–Protein interactions for RNA: ENST00000488072.1

SHROOM1-205, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-205ENST00000488072 PAPOLGQ9BWT3 736 aaKnown RBP14.48□□□□□ -0.09
SHROOM1-205ENST00000488072 GCM1Q9NP62 436 aa14.48□□□□□ -0.09
SHROOM1-205ENST00000488072 PLCXD1Q9NUJ7 323 aa14.48□□□□□ -0.09
SHROOM1-205ENST00000488072 FBXO9Q9UK97 447 aaPredicted RBP14.48□□□□□ -0.09
SHROOM1-205ENST00000488072 PIGLQ9Y2B2 252 aa14.48□□□□□ -0.09
SHROOM1-205ENST00000488072 FLNAP21333 2647 aaKnown RBP14.47□□□□□ -0.09
SHROOM1-205ENST00000488072 CELSR1Q9NYQ6 3014 aa14.47□□□□□ -0.09
SHROOM1-205ENST00000488072 LOC390937A0A1W2PQ73 354 aa14.47□□□□□ -0.09
SHROOM1-205ENST00000488072 OR4C45A6NMZ5 311 aa14.47□□□□□ -0.09
SHROOM1-205ENST00000488072 PPIHO43447 177 aaKnown RBP14.47□□□□□ -0.09
SHROOM1-205ENST00000488072 GRPP07492 148 aa14.47□□□□□ -0.09
SHROOM1-205ENST00000488072 HTR1AP08908 422 aa14.47□□□□□ -0.09
SHROOM1-205ENST00000488072 DCKP27707 260 aa14.47□□□□□ -0.09
SHROOM1-205ENST00000488072 THBS2P35442 1172 aa14.47□□□□□ -0.09
SHROOM1-205ENST00000488072 PLPP7Q8NBV4 271 aa14.47□□□□□ -0.09
SHROOM1-205ENST00000488072 HPSE2Q8WWQ2 592 aa14.47□□□□□ -0.09
SHROOM1-205ENST00000488072 COX4I2Q96KJ9 171 aa14.47□□□□□ -0.09
SHROOM1-205ENST00000488072 PIMREGQ9BSJ6 248 aa14.47□□□□□ -0.09
SHROOM1-205ENST00000488072 JAM3Q9BX67 310 aa14.47□□□□□ -0.09
SHROOM1-205ENST00000488072 RGCCQ9H4X1 137 aa14.47□□□□□ -0.09
SHROOM1-205ENST00000488072 METTL17Q9H7H0 456 aaPredicted RBP14.47□□□□□ -0.09
SHROOM1-205ENST00000488072 GPR173Q9NS66 373 aa14.47□□□□□ -0.09
SHROOM1-205ENST00000488072 MRPL15Q9P015 296 aaKnown RBP14.47□□□□□ -0.09
SHROOM1-205ENST00000488072 CGGBP1Q9UFW8 167 aaPredicted RBP14.47□□□□□ -0.09
SHROOM1-205ENST00000488072 IL19Q9UHD0 177 aa14.47□□□□□ -0.09
SHROOM1-205ENST00000488072 LOC107986453A0A1B0GWG9 222 aa14.46□□□□□ -0.09
SHROOM1-205ENST00000488072 ANKRD30BLA7E2S9 258 aa14.46□□□□□ -0.09
SHROOM1-205ENST00000488072 ACHEP22303 614 aa14.46□□□□□ -0.09
SHROOM1-205ENST00000488072 GIFP27352 417 aa14.46□□□□□ -0.09
SHROOM1-205ENST00000488072 CSNK2BP67870 215 aa14.46□□□□□ -0.09
SHROOM1-205ENST00000488072 KRTAP1-1Q07627 177 aa14.46□□□□□ -0.09
SHROOM1-205ENST00000488072 ALKBH1Q13686 389 aaKnown RBP14.46□□□□□ -0.09
SHROOM1-205ENST00000488072 ZMAT1Q5H9K5 638 aa14.46□□□□□ -0.09
SHROOM1-205ENST00000488072 MOB3CQ70IA8 216 aa14.46□□□□□ -0.09
SHROOM1-205ENST00000488072 C11orf53Q8IXP5 236 aa14.46□□□□□ -0.09
SHROOM1-205ENST00000488072 SYS1Q8N2H4 156 aa14.46□□□□□ -0.09
SHROOM1-205ENST00000488072 ZNF485Q8NCK3 441 aa14.46□□□□□ -0.09
SHROOM1-205ENST00000488072 ZNF540Q8NDQ6 660 aa14.46□□□□□ -0.09
SHROOM1-205ENST00000488072 RGP1Q92546 391 aaPredicted RBP14.46□□□□□ -0.09
SHROOM1-205ENST00000488072 DIRC2Q96SL1 478 aa14.46□□□□□ -0.09
SHROOM1-205ENST00000488072 ZNF184Q99676 751 aaPredicted RBP14.46□□□□□ -0.09
SHROOM1-205ENST00000488072 PDCD1LG2Q9BQ51 273 aa14.46□□□□□ -0.09
SHROOM1-205ENST00000488072 EGLN1Q9GZT9 426 aa14.46□□□□□ -0.09
SHROOM1-205ENST00000488072 OPA3Q9H6K4 179 aa14.46□□□□□ -0.09
SHROOM1-205ENST00000488072 MOB1AQ9H8S9 216 aa14.46□□□□□ -0.09
SHROOM1-205ENST00000488072 CHODLQ9H9P2 273 aa14.46□□□□□ -0.09
SHROOM1-205ENST00000488072 INPP5EQ9NRR6 644 aa14.46□□□□□ -0.09
SHROOM1-205ENST00000488072 RAB26Q9ULW5 256 aa14.46□□□□□ -0.09
SHROOM1-205ENST00000488072 V9GYS6 101 aa14.46□□□□□ -0.09
SHROOM1-205ENST00000488072 EFCAB10A6NFE3 127 aa14.45□□□□□ -0.1
SHROOM1-205ENST00000488072 TACSTD2P09758 323 aa14.45□□□□□ -0.1
SHROOM1-205ENST00000488072 PIPP12273 146 aaPredicted RBP14.45□□□□□ -0.1
SHROOM1-205ENST00000488072 CCL1P22362 96 aa14.45□□□□□ -0.1
SHROOM1-205ENST00000488072 TNFSF4P23510 183 aa14.45□□□□□ -0.1
SHROOM1-205ENST00000488072 DDOSTP39656 456 aa14.45□□□□□ -0.1
SHROOM1-205ENST00000488072 CD200P41217 278 aa14.45□□□□□ -0.1
SHROOM1-205ENST00000488072 GPR6P46095 362 aaPredicted RBP14.45□□□□□ -0.1
SHROOM1-205ENST00000488072 SNCBQ16143 134 aa14.45□□□□□ -0.1
SHROOM1-205ENST00000488072 FDX2Q6P4F2 183 aa14.45□□□□□ -0.1
SHROOM1-205ENST00000488072 RNF144BQ7Z419 303 aa14.45□□□□□ -0.1
SHROOM1-205ENST00000488072 LURAP1LQ8IV03 231 aa14.45□□□□□ -0.1
SHROOM1-205ENST00000488072 STX19Q8N4C7 294 aa14.45□□□□□ -0.1
SHROOM1-205ENST00000488072 BOLLQ8N9W6 283 aaKnown RBP14.45□□□□□ -0.1
SHROOM1-205ENST00000488072 SEMA6DQ8NFY4 1073 aa14.45□□□□□ -0.1
SHROOM1-205ENST00000488072 OR13C5Q8NGS8 318 aa14.45□□□□□ -0.1
SHROOM1-205ENST00000488072 ITPKCQ96DU7 683 aa14.45□□□□□ -0.1
SHROOM1-205ENST00000488072 TMEM106BQ9NUM4 274 aa14.45□□□□□ -0.1
SHROOM1-205ENST00000488072 PPP1R3CQ9UQK1 317 aa14.45□□□□□ -0.1
SHROOM1-205ENST00000488072 EXOSC1Q9Y3B2 195 aaKnown RBP14.45□□□□□ -0.1
SHROOM1-205ENST00000488072 WIPI2Q9Y4P8 454 aa14.45□□□□□ -0.1
SHROOM1-205ENST00000488072 PNMA8CA0A1B0GUJ8 204 aa14.44□□□□□ -0.1
SHROOM1-205ENST00000488072 A0A1B0GVI7 797 aa14.44□□□□□ -0.1
SHROOM1-205ENST00000488072 SYT7O43581 403 aa14.44□□□□□ -0.1
SHROOM1-205ENST00000488072 DHRS3O75911 302 aa14.44□□□□□ -0.1
SHROOM1-205ENST00000488072 ZFPL1O95159 310 aa14.44□□□□□ -0.1
SHROOM1-205ENST00000488072 CST4P01036 141 aa14.44□□□□□ -0.1
SHROOM1-205ENST00000488072 MT-ND2P03891 347 aa14.44□□□□□ -0.1
SHROOM1-205ENST00000488072 CDK1P06493 297 aa14.44□□□□□ -0.1
SHROOM1-205ENST00000488072 INHBBP09529 407 aa14.44□□□□□ -0.1
SHROOM1-205ENST00000488072 EGR1P18146 543 aa14.44□□□□□ -0.1
SHROOM1-205ENST00000488072 CFL1P23528 166 aaKnown RBP14.44□□□□□ -0.1
SHROOM1-205ENST00000488072 MAP2K3P46734 347 aa14.44□□□□□ -0.1
SHROOM1-205ENST00000488072 DSCR9P59020 149 aa14.44□□□□□ -0.1
SHROOM1-205ENST00000488072 ACTA2P62736 377 aa14.44□□□□□ -0.1
SHROOM1-205ENST00000488072 ACTG2P63267 376 aa14.44□□□□□ -0.1
SHROOM1-205ENST00000488072 RIPPLY1Q0D2K3 151 aa14.44□□□□□ -0.1
SHROOM1-205ENST00000488072 HFEQ30201 348 aa14.44□□□□□ -0.1
SHROOM1-205ENST00000488072 DOK3Q7L591 496 aa14.44□□□□□ -0.1
SHROOM1-205ENST00000488072 KCTD20Q7Z5Y7 419 aa14.44□□□□□ -0.1
SHROOM1-205ENST00000488072 KLHL36Q8N4N3 616 aa14.44□□□□□ -0.1
SHROOM1-205ENST00000488072 CSNK2A3Q8NEV1 391 aa14.44□□□□□ -0.1
SHROOM1-205ENST00000488072 NPRL2Q8WTW4 380 aa14.44□□□□□ -0.1
SHROOM1-205ENST00000488072 OR5P3Q8WZ94 311 aa14.44□□□□□ -0.1
SHROOM1-205ENST00000488072 RPL3LQ92901 407 aaKnown RBP14.44□□□□□ -0.1
SHROOM1-205ENST00000488072 SEH1LQ96EE3 360 aa14.44□□□□□ -0.1
SHROOM1-205ENST00000488072 ADAT3Q96EY9 351 aaPredicted RBP14.44□□□□□ -0.1
SHROOM1-205ENST00000488072 C18orf12Q96KH6 178 aa14.44□□□□□ -0.1
SHROOM1-205ENST00000488072 OR5M11Q96RB7 305 aa14.44□□□□□ -0.1
SHROOM1-205ENST00000488072 C1orf123Q9NWV4 160 aa14.44□□□□□ -0.1
SHROOM1-205ENST00000488072 CNOT2Q9NZN8 540 aaKnown RBP14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms