RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 DNPH1O43598 174 aa22.98■■□□□ 1.27
HLA-C-208ENST00000487245 CDC14BO60729 498 aa22.98■■□□□ 1.27
HLA-C-208ENST00000487245 ABOP16442 354 aa22.98■■□□□ 1.27
HLA-C-208ENST00000487245 GJC3Q8NFK1 279 aa22.98■■□□□ 1.27
HLA-C-208ENST00000487245 OR4K15Q8NH41 348 aa22.98■■□□□ 1.27
HLA-C-208ENST00000487245 VRK1Q99986 396 aaPredicted RBP22.98■■□□□ 1.27
HLA-C-208ENST00000487245 HIST1H1DP16402 221 aaKnown RBP22.98■■□□□ 1.27
HLA-C-208ENST00000487245 ACP1P24666 158 aa22.98■■□□□ 1.27
HLA-C-208ENST00000487245 ARRDC1Q8N5I2 433 aa22.98■■□□□ 1.27
HLA-C-208ENST00000487245 NICN1Q9BSH3 213 aa22.98■■□□□ 1.27
HLA-C-208ENST00000487245 ZNF416Q9BWM5 594 aa22.98■■□□□ 1.27
HLA-C-208ENST00000487245 FN3KRPQ9HA64 309 aa22.98■■□□□ 1.27
HLA-C-208ENST00000487245 ZNF319Q9P2F9 582 aa22.98■■□□□ 1.27
HLA-C-208ENST00000487245 LAMA1P25391 3075 aa22.97■■□□□ 1.27
HLA-C-208ENST00000487245 EML6Q6ZMW3 1958 aa22.97■■□□□ 1.27
HLA-C-208ENST00000487245 CCSO14618 274 aa22.97■■□□□ 1.27
HLA-C-208ENST00000487245 IGLV3-1P01715 115 aa22.97■■□□□ 1.27
HLA-C-208ENST00000487245 LIPCP11150 499 aa22.97■■□□□ 1.27
HLA-C-208ENST00000487245 HOXD11P31277 338 aaPredicted RBP22.97■■□□□ 1.27
HLA-C-208ENST00000487245 CBX5P45973 191 aa22.97■■□□□ 1.27
HLA-C-208ENST00000487245 ATP1B3P54709 279 aa22.97■■□□□ 1.27
HLA-C-208ENST00000487245 OR9K2Q8NGE7 335 aa22.97■■□□□ 1.27
HLA-C-208ENST00000487245 JSRP1Q96MG2 331 aaPredicted RBP22.97■■□□□ 1.27
HLA-C-208ENST00000487245 OCSTAMPQ9BR26 566 aa22.97■■□□□ 1.27
HLA-C-208ENST00000487245 WDR13Q9H1Z4 485 aa22.97■■□□□ 1.27
HLA-C-208ENST00000487245 DLSTP36957 453 aa22.96■■□□□ 1.27
HLA-C-208ENST00000487245 SUCLG1P53597 346 aaKnown RBP22.96■■□□□ 1.27
HLA-C-208ENST00000487245 SIGLEC14Q08ET2 396 aa22.96■■□□□ 1.27
HLA-C-208ENST00000487245 DCAF12Q5T6F0 453 aa22.96■■□□□ 1.27
HLA-C-208ENST00000487245 TFAP2EQ6VUC0 442 aa22.96■■□□□ 1.27
HLA-C-208ENST00000487245 FAM57BQ71RH2 274 aa22.96■■□□□ 1.27
HLA-C-208ENST00000487245 ADAD2Q8NCV1 583 aaKnown RBP22.96■■□□□ 1.27
HLA-C-208ENST00000487245 CCDC54Q8NEL0 328 aa22.96■■□□□ 1.27
HLA-C-208ENST00000487245 OR56B1Q8NGI3 324 aa22.96■■□□□ 1.27
HLA-C-208ENST00000487245 OR14K1Q8NGZ2 314 aa22.96■■□□□ 1.27
HLA-C-208ENST00000487245 TERB2Q8NHR7 220 aa22.96■■□□□ 1.27
HLA-C-208ENST00000487245 RAB3CQ96E17 227 aa22.96■■□□□ 1.27
HLA-C-208ENST00000487245 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP22.96■■□□□ 1.27
HLA-C-208ENST00000487245 A0A0B4J2A0 478 aa22.96■■□□□ 1.27
HLA-C-208ENST00000487245 APOC1P02654 83 aa22.96■■□□□ 1.27
HLA-C-208ENST00000487245 PRF1P14222 555 aa22.96■■□□□ 1.27
HLA-C-208ENST00000487245 CHAF1BQ13112 559 aa22.96■■□□□ 1.27
HLA-C-208ENST00000487245 PLAC9Q5JTB6 97 aa22.96■■□□□ 1.27
HLA-C-208ENST00000487245 RNF144BQ7Z419 303 aa22.96■■□□□ 1.27
HLA-C-208ENST00000487245 TMEM104Q8NE00 496 aa22.96■■□□□ 1.27
HLA-C-208ENST00000487245 LHFPL5Q8TAF8 219 aa22.96■■□□□ 1.27
HLA-C-208ENST00000487245 THAP6Q8TBB0 222 aa22.96■■□□□ 1.27
HLA-C-208ENST00000487245 PGAM5Q96HS1 289 aa22.96■■□□□ 1.27
HLA-C-208ENST00000487245 SEC22AQ96IW7 307 aa22.96■■□□□ 1.27
HLA-C-208ENST00000487245 SF3B5Q9BWJ5 86 aaKnown RBP22.96■■□□□ 1.27
HLA-C-208ENST00000487245 TMEM59Q9BXS4 323 aa22.96■■□□□ 1.27
HLA-C-208ENST00000487245 BARX1Q9HBU1 254 aaPredicted RBP22.96■■□□□ 1.27
HLA-C-208ENST00000487245 GHRLQ9UBU3 117 aa22.96■■□□□ 1.27
HLA-C-208ENST00000487245 SHPKQ9UHJ6 478 aa22.96■■□□□ 1.27
HLA-C-208ENST00000487245 GPR160Q9UJ42 338 aa22.96■■□□□ 1.27
HLA-C-208ENST00000487245 MFNGO00587 321 aa22.95■■□□□ 1.26
HLA-C-208ENST00000487245 DHHO43323 396 aa22.95■■□□□ 1.26
HLA-C-208ENST00000487245 MPIG6BO95866 241 aa22.95■■□□□ 1.26
HLA-C-208ENST00000487245 PMP2P02689 132 aa22.95■■□□□ 1.26
HLA-C-208ENST00000487245 SLC2A1P11166 492 aa22.95■■□□□ 1.26
HLA-C-208ENST00000487245 ALDH3B1P43353 468 aa22.95■■□□□ 1.26
HLA-C-208ENST00000487245 OR3A4PP47883 348 aa22.95■■□□□ 1.26
HLA-C-208ENST00000487245 TMEM123Q8N131 208 aa22.95■■□□□ 1.26
HLA-C-208ENST00000487245 FAM89BQ8N5H3 189 aa22.95■■□□□ 1.26
HLA-C-208ENST00000487245 TMEM185AQ8NFB2 350 aa22.95■■□□□ 1.26
HLA-C-208ENST00000487245 FAM71F1Q96KD3 344 aaPredicted RBP22.95■■□□□ 1.26
HLA-C-208ENST00000487245 SOX7Q9BT81 388 aa22.95■■□□□ 1.26
HLA-C-208ENST00000487245 PADI1Q9ULC6 663 aa22.95■■□□□ 1.26
HLA-C-208ENST00000487245 P04436 131 aa22.94■■□□□ 1.26
HLA-C-208ENST00000487245 SRD5A2P31213 254 aa22.94■■□□□ 1.26
HLA-C-208ENST00000487245 ZNF84P51523 738 aa22.94■■□□□ 1.26
HLA-C-208ENST00000487245 HIST1H3AP68431 136 aa22.94■■□□□ 1.26
HLA-C-208ENST00000487245 MICBQ29980 383 aa22.94■■□□□ 1.26
HLA-C-208ENST00000487245 HIST2H3PS2Q5TEC6 136 aa22.94■■□□□ 1.26
HLA-C-208ENST00000487245 Q6ZSR3 168 aa22.94■■□□□ 1.26
HLA-C-208ENST00000487245 HIST2H3AQ71DI3 136 aa22.94■■□□□ 1.26
HLA-C-208ENST00000487245 RELL2Q8NC24 303 aaPredicted RBP22.94■■□□□ 1.26
HLA-C-208ENST00000487245 KCNE4Q8WWG9 221 aa22.94■■□□□ 1.26
HLA-C-208ENST00000487245 MRPS24Q96EL2 167 aaKnown RBP22.94■■□□□ 1.26
HLA-C-208ENST00000487245 URM1Q9BTM9 101 aaKnown RBP22.94■■□□□ 1.26
HLA-C-208ENST00000487245 GPR132Q9UNW8 380 aa22.94■■□□□ 1.26
HLA-C-208ENST00000487245 TRBV6-7A0A0A0MS04 114 aa22.94■■□□□ 1.26
HLA-C-208ENST00000487245 LGALS8O00214 317 aa22.94■■□□□ 1.26
HLA-C-208ENST00000487245 WDPCPO95876 746 aa22.94■■□□□ 1.26
HLA-C-208ENST00000487245 TMEM50BP56557 158 aa22.94■■□□□ 1.26
HLA-C-208ENST00000487245 ENDOGQ14249 297 aaKnown RBP22.94■■□□□ 1.26
HLA-C-208ENST00000487245 OR10K1Q8NGX5 313 aa22.94■■□□□ 1.26
HLA-C-208ENST00000487245 CDC6Q99741 560 aa22.94■■□□□ 1.26
HLA-C-208ENST00000487245 NMES1Q9C002 83 aa22.94■■□□□ 1.26
HLA-C-208ENST00000487245 LOC100509620A0A075B734 347 aa22.93■■□□□ 1.26
HLA-C-208ENST00000487245 A0A0J9YW62 118 aa22.93■■□□□ 1.26
HLA-C-208ENST00000487245 A0A0U1RQV5 110 aa22.93■■□□□ 1.26
HLA-C-208ENST00000487245 SOCS1O15524 211 aa22.93■■□□□ 1.26
HLA-C-208ENST00000487245 HCKP08631 526 aa22.93■■□□□ 1.26
HLA-C-208ENST00000487245 ZNF883P0CG24 379 aa22.93■■□□□ 1.26
HLA-C-208ENST00000487245 AVPR2P30518 371 aa22.93■■□□□ 1.26
HLA-C-208ENST00000487245 CYCSP99999 105 aaKnown RBP22.93■■□□□ 1.26
HLA-C-208ENST00000487245 TMEM128Q5BJH2 165 aa22.93■■□□□ 1.26
HLA-C-208ENST00000487245 RTN4RL2Q86UN3 420 aa22.93■■□□□ 1.26
HLA-C-208ENST00000487245 SREK1IP1Q8N9Q2 155 aaPredicted RBP22.93■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms