RNA–Protein interactions for RNA: ENST00000487026.5

LIME1-206, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LIME1, Length 805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-206ENST00000487026 TMIGD2Q96BF3 282 aa20.32■□□□□ 0.84
LIME1-206ENST00000487026 PGAM5Q96HS1 289 aa20.32■□□□□ 0.84
LIME1-206ENST00000487026 WDFY2Q96P53 400 aa20.32■□□□□ 0.84
LIME1-206ENST00000487026 CCL13Q99616 98 aa20.32■□□□□ 0.84
LIME1-206ENST00000487026 SP140LQ9H930 580 aa20.32■□□□□ 0.84
LIME1-206ENST00000487026 PDP1Q9P0J1 537 aaPredicted RBP20.32■□□□□ 0.84
LIME1-206ENST00000487026 DUX4Q9UBX2 424 aa20.32■□□□□ 0.84
LIME1-206ENST00000487026 GNGT2O14610 69 aa20.31■□□□□ 0.84
LIME1-206ENST00000487026 SELENOFO60613 162 aa20.31■□□□□ 0.84
LIME1-206ENST00000487026 OR52H1Q8NGJ2 320 aa20.31■□□□□ 0.84
LIME1-206ENST00000487026 THEM6Q8WUY1 208 aa20.31■□□□□ 0.84
LIME1-206ENST00000487026 CANT1Q8WVQ1 401 aa20.31■□□□□ 0.84
LIME1-206ENST00000487026 ST8SIA4Q92187 359 aa20.31■□□□□ 0.84
LIME1-206ENST00000487026 THTPAQ9BU02 230 aa20.31■□□□□ 0.84
LIME1-206ENST00000487026 OR10A2Q9H208 303 aa20.31■□□□□ 0.84
LIME1-206ENST00000487026 KIF17Q9P2E2 1029 aa20.31■□□□□ 0.84
LIME1-206ENST00000487026 MEGF8Q7Z7M0 2845 aa20.31■□□□□ 0.84
LIME1-206ENST00000487026 FAM181BA6NEQ2 426 aa20.3■□□□□ 0.84
LIME1-206ENST00000487026 SRRM5B3KS81 715 aa20.3■□□□□ 0.84
LIME1-206ENST00000487026 APOC1P02654 83 aa20.3■□□□□ 0.84
LIME1-206ENST00000487026 PAICSP22234 425 aaKnown RBP20.3■□□□□ 0.84
LIME1-206ENST00000487026 BPIFB3P59826 476 aa20.3■□□□□ 0.84
LIME1-206ENST00000487026 PRR31Q5SQ13 230 aa20.3■□□□□ 0.84
LIME1-206ENST00000487026 METTL11BQ5VVY1 283 aa20.3■□□□□ 0.84
LIME1-206ENST00000487026 WDR82Q6UXN9 313 aa20.3■□□□□ 0.84
LIME1-206ENST00000487026 Q6YL49 198 aa20.3■□□□□ 0.84
LIME1-206ENST00000487026 HIST2H2ABQ8IUE6 130 aaPredicted RBP20.3■□□□□ 0.84
LIME1-206ENST00000487026 HS3ST5Q8IZT8 346 aa20.3■□□□□ 0.84
LIME1-206ENST00000487026 LHX4Q969G2 390 aa20.3■□□□□ 0.84
LIME1-206ENST00000487026 PAPOLGQ9BWT3 736 aaKnown RBP20.3■□□□□ 0.84
LIME1-206ENST00000487026 SIRPDQ9H106 197 aa20.3■□□□□ 0.84
LIME1-206ENST00000487026 RNPEPL1Q9HAU8 725 aa20.3■□□□□ 0.84
LIME1-206ENST00000487026 POM121CA8CG34 1229 aa20.29■□□□□ 0.84
LIME1-206ENST00000487026 PRR23D1E9PI22 279 aaPredicted RBP20.29■□□□□ 0.84
LIME1-206ENST00000487026 CDIPTO14735 213 aa20.29■□□□□ 0.84
LIME1-206ENST00000487026 WIPF1O43516 503 aa20.29■□□□□ 0.84
LIME1-206ENST00000487026 FAM107AO95990 144 aa20.29■□□□□ 0.84
LIME1-206ENST00000487026 PRR23D2P0DMB1 279 aaPredicted RBP20.29■□□□□ 0.84
LIME1-206ENST00000487026 GNALP38405 381 aa20.29■□□□□ 0.84
LIME1-206ENST00000487026 GMFBP60983 142 aa20.29■□□□□ 0.84
LIME1-206ENST00000487026 GK3PQ14409 553 aa20.29■□□□□ 0.84
LIME1-206ENST00000487026 MICBQ29980 383 aa20.29■□□□□ 0.84
LIME1-206ENST00000487026 FIP1L1Q6UN15 594 aaKnown RBP20.29■□□□□ 0.84
LIME1-206ENST00000487026 PDZD9Q8IXQ8 264 aa20.29■□□□□ 0.84
LIME1-206ENST00000487026 CHIAQ9BZP6 476 aa20.29■□□□□ 0.84
LIME1-206ENST00000487026 ZNF696Q9H7X3 374 aa20.29■□□□□ 0.84
LIME1-206ENST00000487026 NOX4Q9NPH5 578 aa20.29■□□□□ 0.84
LIME1-206ENST00000487026 KAAG1Q9UBP8 84 aa20.29■□□□□ 0.84
LIME1-206ENST00000487026 ARRDC5A6NEK1 342 aa20.28■□□□□ 0.84
LIME1-206ENST00000487026 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP20.28■□□□□ 0.84
LIME1-206ENST00000487026 LYNP07948 512 aa20.28■□□□□ 0.84
LIME1-206ENST00000487026 MELTFP08582 738 aa20.28■□□□□ 0.84
LIME1-206ENST00000487026 PRKACGP22612 351 aa20.28■□□□□ 0.84
LIME1-206ENST00000487026 CFL1P23528 166 aaKnown RBP20.28■□□□□ 0.84
LIME1-206ENST00000487026 NAA10P41227 235 aaPredicted RBP20.28■□□□□ 0.84
LIME1-206ENST00000487026 WDR38Q5JTN6 314 aa20.28■□□□□ 0.84
LIME1-206ENST00000487026 CPOQ8IVL8 374 aa20.28■□□□□ 0.84
LIME1-206ENST00000487026 CSNK2A3Q8NEV1 391 aa20.28■□□□□ 0.84
LIME1-206ENST00000487026 BBS1Q8NFJ9 593 aa20.28■□□□□ 0.84
LIME1-206ENST00000487026 OR5T2Q8NGG2 359 aa20.28■□□□□ 0.84
LIME1-206ENST00000487026 OTOSQ8NHW6 89 aa20.28■□□□□ 0.84
LIME1-206ENST00000487026 GATAD2BQ8WXI9 593 aa20.28■□□□□ 0.84
LIME1-206ENST00000487026 KLHDC2Q9Y2U9 406 aa20.28■□□□□ 0.84
LIME1-206ENST00000487026 IGHV1-69DA0A0B4J2H0 117 aa20.27■□□□□ 0.84
LIME1-206ENST00000487026 ZNF850A8MQ14 1090 aa20.27■□□□□ 0.84
LIME1-206ENST00000487026 IGHV1-69P01742 117 aa20.27■□□□□ 0.84
LIME1-206ENST00000487026 MUC1P15941 1255 aaPredicted RBP20.27■□□□□ 0.84
LIME1-206ENST00000487026 ACKR3P25106 362 aa20.27■□□□□ 0.84
LIME1-206ENST00000487026 HCCSP53701 268 aa20.27■□□□□ 0.84
LIME1-206ENST00000487026 PDCD1Q15116 288 aa20.27■□□□□ 0.84
LIME1-206ENST00000487026 RHOUQ7L0Q8 258 aa20.27■□□□□ 0.84
LIME1-206ENST00000487026 FAM216BQ8N7L0 139 aa20.27■□□□□ 0.84
LIME1-206ENST00000487026 ITPKCQ96DU7 683 aa20.27■□□□□ 0.84
LIME1-206ENST00000487026 MICU1Q9BPX6 476 aa20.27■□□□□ 0.84
LIME1-206ENST00000487026 C1orf21Q9H246 121 aa20.27■□□□□ 0.84
LIME1-206ENST00000487026 CNTD2Q9H8S5 307 aa20.27■□□□□ 0.84
LIME1-206ENST00000487026 RPUSD1Q9UJJ7 312 aaKnown RBP20.27■□□□□ 0.84
LIME1-206ENST00000487026 TIPRLO75663 272 aa20.26■□□□□ 0.83
LIME1-206ENST00000487026 ECDO95905 644 aaPredicted RBP20.26■□□□□ 0.83
LIME1-206ENST00000487026 OSMP13725 252 aa20.26■□□□□ 0.83
LIME1-206ENST00000487026 PRDX4Q13162 271 aa20.26■□□□□ 0.83
LIME1-206ENST00000487026 TMEM236Q5W0B7 351 aa20.26■□□□□ 0.83
LIME1-206ENST00000487026 GALNT4Q8N4A0 578 aa20.26■□□□□ 0.83
LIME1-206ENST00000487026 RPL3LQ92901 407 aaKnown RBP20.26■□□□□ 0.83
LIME1-206ENST00000487026 FAM71F1Q96KD3 344 aaPredicted RBP20.26■□□□□ 0.83
LIME1-206ENST00000487026 LYZL4Q96KX0 146 aa20.26■□□□□ 0.83
LIME1-206ENST00000487026 SNTG1Q9NSN8 517 aa20.26■□□□□ 0.83
LIME1-206ENST00000487026 ACOXLQ9NUZ1 547 aa20.26■□□□□ 0.83
LIME1-206ENST00000487026 AQP12BA6NM10 295 aa20.25■□□□□ 0.83
LIME1-206ENST00000487026 E2F6O75461 281 aa20.25■□□□□ 0.83
LIME1-206ENST00000487026 TFF1P04155 84 aa20.25■□□□□ 0.83
LIME1-206ENST00000487026 HMGN1P05114 100 aa20.25■□□□□ 0.83
LIME1-206ENST00000487026 CRYBA1P05813 215 aa20.25■□□□□ 0.83
LIME1-206ENST00000487026 CDK5Q00535 292 aa20.25■□□□□ 0.83
LIME1-206ENST00000487026 RELBQ01201 579 aa20.25■□□□□ 0.83
LIME1-206ENST00000487026 SRSF4Q08170 494 aaKnown RBP20.25■□□□□ 0.83
LIME1-206ENST00000487026 IKZF1Q13422 519 aa20.25■□□□□ 0.83
LIME1-206ENST00000487026 AQP12AQ8IXF9 295 aa20.25■□□□□ 0.83
LIME1-206ENST00000487026 KIR3DL3Q8N743 410 aa20.25■□□□□ 0.83
LIME1-206ENST00000487026 ZNF454Q8N9F8 522 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms