RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 SGCZQ96LD1 299 aa15.8■□□□□ 0.12
PDLIM7-207ENST00000486828 URM1Q9BTM9 101 aaKnown RBP15.8■□□□□ 0.12
PDLIM7-207ENST00000486828 SRXN1Q9BYN0 137 aa15.8■□□□□ 0.12
PDLIM7-207ENST00000486828 ULBP2Q9BZM5 246 aa15.8■□□□□ 0.12
PDLIM7-207ENST00000486828 RYDENQ9NUL5 291 aaKnown RBP15.8■□□□□ 0.12
PDLIM7-207ENST00000486828 hCG_1807616A0A1W2PRN6 198 aa15.79■□□□□ 0.12
PDLIM7-207ENST00000486828 OR5H14A6NHG9 310 aa15.79■□□□□ 0.12
PDLIM7-207ENST00000486828 B4E171 279 aa15.79■□□□□ 0.12
PDLIM7-207ENST00000486828 DNPH1O43598 174 aa15.79■□□□□ 0.12
PDLIM7-207ENST00000486828 DHRS3O75911 302 aa15.79■□□□□ 0.12
PDLIM7-207ENST00000486828 MPGP29372 298 aa15.79■□□□□ 0.12
PDLIM7-207ENST00000486828 TSPAN7P41732 249 aa15.79■□□□□ 0.12
PDLIM7-207ENST00000486828 ZNF84P51523 738 aa15.79■□□□□ 0.12
PDLIM7-207ENST00000486828 RSPO1Q2MKA7 263 aaPredicted RBP15.79■□□□□ 0.12
PDLIM7-207ENST00000486828 ACTBL2Q562R1 376 aa15.79■□□□□ 0.12
PDLIM7-207ENST00000486828 Q6ZSR3 168 aa15.79■□□□□ 0.12
PDLIM7-207ENST00000486828 ZNF546Q86UE3 836 aa15.79■□□□□ 0.12
PDLIM7-207ENST00000486828 C20orf196Q8IYI0 205 aa15.79■□□□□ 0.12
PDLIM7-207ENST00000486828 WBP1Q96G27 269 aa15.79■□□□□ 0.12
PDLIM7-207ENST00000486828 LIN37Q96GY3 246 aaPredicted RBP15.79■□□□□ 0.12
PDLIM7-207ENST00000486828 SF3B5Q9BWJ5 86 aaKnown RBP15.79■□□□□ 0.12
PDLIM7-207ENST00000486828 MED9Q9NWA0 146 aa15.79■□□□□ 0.12
PDLIM7-207ENST00000486828 RDH8Q9NYR8 311 aa15.79■□□□□ 0.12
PDLIM7-207ENST00000486828 GHRLQ9UBU3 117 aa15.79■□□□□ 0.12
PDLIM7-207ENST00000486828 MFNGO00587 321 aa15.78■□□□□ 0.12
PDLIM7-207ENST00000486828 SMAD9O15198 467 aaKnown RBP15.78■□□□□ 0.12
PDLIM7-207ENST00000486828 NMBP08949 121 aa15.78■□□□□ 0.12
PDLIM7-207ENST00000486828 ZNF250P15622 560 aa15.78■□□□□ 0.12
PDLIM7-207ENST00000486828 ALDH3B1P43353 468 aa15.78■□□□□ 0.12
PDLIM7-207ENST00000486828 B3GALT5-AS1P59052 145 aa15.78■□□□□ 0.12
PDLIM7-207ENST00000486828 IL13RA1P78552 427 aa15.78■□□□□ 0.12
PDLIM7-207ENST00000486828 KISS1Q15726 138 aa15.78■□□□□ 0.12
PDLIM7-207ENST00000486828 MICBQ29980 383 aa15.78■□□□□ 0.12
PDLIM7-207ENST00000486828 VAX1Q5SQQ9 334 aa15.78■□□□□ 0.12
PDLIM7-207ENST00000486828 CRIP3Q6Q6R5 217 aa15.78■□□□□ 0.12
PDLIM7-207ENST00000486828 SLC51BQ86UW2 128 aa15.78■□□□□ 0.12
PDLIM7-207ENST00000486828 HOGA1Q86XE5 327 aa15.78■□□□□ 0.12
PDLIM7-207ENST00000486828 LRRC20Q8TCA0 184 aa15.78■□□□□ 0.12
PDLIM7-207ENST00000486828 PP6455Q8WZ26 134 aa15.78■□□□□ 0.12
PDLIM7-207ENST00000486828 RBPMSQ93062 196 aaKnown RBP15.78■□□□□ 0.12
PDLIM7-207ENST00000486828 PHB2Q99623 299 aa15.78■□□□□ 0.12
PDLIM7-207ENST00000486828 PDCD10Q9BUL8 212 aa15.78■□□□□ 0.12
PDLIM7-207ENST00000486828 FN3KRPQ9HA64 309 aa15.78■□□□□ 0.12
PDLIM7-207ENST00000486828 ZNF224Q9NZL3 707 aa15.78■□□□□ 0.12
PDLIM7-207ENST00000486828 FLVCR1Q9Y5Y0 555 aa15.78■□□□□ 0.12
PDLIM7-207ENST00000486828 CCSO14618 274 aa15.78■□□□□ 0.12
PDLIM7-207ENST00000486828 EFSO43281 561 aa15.78■□□□□ 0.12
PDLIM7-207ENST00000486828 RAD51DO75771 328 aa15.78■□□□□ 0.12
PDLIM7-207ENST00000486828 APOC1P02654 83 aa15.78■□□□□ 0.12
PDLIM7-207ENST00000486828 SLC25A4P12235 298 aa15.78■□□□□ 0.12
PDLIM7-207ENST00000486828 SRD5A2P31213 254 aa15.78■□□□□ 0.12
PDLIM7-207ENST00000486828 PTGFRP43088 359 aa15.78■□□□□ 0.12
PDLIM7-207ENST00000486828 RPS27AP62979 156 aaKnown RBP15.78■□□□□ 0.12
PDLIM7-207ENST00000486828 CHAF1BQ13112 559 aa15.78■□□□□ 0.12
PDLIM7-207ENST00000486828 RGS7BPQ6MZT1 257 aaPredicted RBP15.78■□□□□ 0.12
PDLIM7-207ENST00000486828 PPP1R32Q7Z5V6 425 aa15.78■□□□□ 0.12
PDLIM7-207ENST00000486828 FAM89BQ8N5H3 189 aa15.78■□□□□ 0.12
PDLIM7-207ENST00000486828 ADAD2Q8NCV1 583 aaKnown RBP15.78■□□□□ 0.12
PDLIM7-207ENST00000486828 CCDC54Q8NEL0 328 aa15.78■□□□□ 0.12
PDLIM7-207ENST00000486828 ST8SIA4Q92187 359 aa15.78■□□□□ 0.12
PDLIM7-207ENST00000486828 FBXW5Q969U6 566 aa15.78■□□□□ 0.12
PDLIM7-207ENST00000486828 ARHGAP5-AS1Q96IT6 56 aa15.78■□□□□ 0.12
PDLIM7-207ENST00000486828 OCSTAMPQ9BR26 566 aa15.78■□□□□ 0.12
PDLIM7-207ENST00000486828 OR10A2Q9H208 303 aa15.78■□□□□ 0.12
PDLIM7-207ENST00000486828 COMMD9Q9P000 198 aa15.78■□□□□ 0.12
PDLIM7-207ENST00000486828 TMA7Q9Y2S6 64 aaKnown RBP15.78■□□□□ 0.12
PDLIM7-207ENST00000486828 A0A0D9SG52 128 aa15.77■□□□□ 0.12
PDLIM7-207ENST00000486828 M0R135 149 aa15.77■□□□□ 0.12
PDLIM7-207ENST00000486828 P04436 131 aa15.77■□□□□ 0.12
PDLIM7-207ENST00000486828 GP1BAP07359 652 aa15.77■□□□□ 0.12
PDLIM7-207ENST00000486828 NAT2P11245 290 aa15.77■□□□□ 0.12
PDLIM7-207ENST00000486828 HOXD11P31277 338 aaPredicted RBP15.77■□□□□ 0.12
PDLIM7-207ENST00000486828 CBX5P45973 191 aa15.77■□□□□ 0.12
PDLIM7-207ENST00000486828 TAS2R31P59538 309 aa15.77■□□□□ 0.12
PDLIM7-207ENST00000486828 RAC3P60763 192 aa15.77■□□□□ 0.12
PDLIM7-207ENST00000486828 MRPS34P82930 218 aaKnown RBP15.77■□□□□ 0.12
PDLIM7-207ENST00000486828 FAM27BQ5VT28 67 aa15.77■□□□□ 0.12
PDLIM7-207ENST00000486828 ZNF660Q6AZW8 331 aaPredicted RBP15.77■□□□□ 0.12
PDLIM7-207ENST00000486828 C11orf87Q6NUJ2 197 aa15.77■□□□□ 0.12
PDLIM7-207ENST00000486828 RFPL4BQ6ZWI9 263 aa15.77■□□□□ 0.12
PDLIM7-207ENST00000486828 ARRDC1Q8N5I2 433 aa15.77■□□□□ 0.12
PDLIM7-207ENST00000486828 COQ8AQ8NI60 647 aa15.77■□□□□ 0.12
PDLIM7-207ENST00000486828 C10orf35Q96D05 121 aa15.77■□□□□ 0.12
PDLIM7-207ENST00000486828 FBXO17Q96EF6 278 aa15.77■□□□□ 0.12
PDLIM7-207ENST00000486828 ZNF799Q96GE5 643 aa15.77■□□□□ 0.12
PDLIM7-207ENST00000486828 REG4Q9BYZ8 158 aa15.77■□□□□ 0.12
PDLIM7-207ENST00000486828 CHST5Q9GZS9 411 aa15.77■□□□□ 0.12
PDLIM7-207ENST00000486828 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP15.77■□□□□ 0.12
PDLIM7-207ENST00000486828 PLEK2Q9NYT0 353 aa15.77■□□□□ 0.12
PDLIM7-207ENST00000486828 DUS4LO95620 317 aaKnown RBP15.76■□□□□ 0.11
PDLIM7-207ENST00000486828 ICAM2P13598 275 aa15.76■□□□□ 0.11
PDLIM7-207ENST00000486828 UBE2V2Q15819 145 aa15.76■□□□□ 0.11
PDLIM7-207ENST00000486828 FAM209AQ5JX71 171 aa15.76■□□□□ 0.11
PDLIM7-207ENST00000486828 DTX1Q86Y01 620 aa15.76■□□□□ 0.11
PDLIM7-207ENST00000486828 OR51T1Q8NGJ9 327 aa15.76■□□□□ 0.11
PDLIM7-207ENST00000486828 TERB2Q8NHR7 220 aa15.76■□□□□ 0.11
PDLIM7-207ENST00000486828 MARCH1Q8TCQ1 289 aa15.76■□□□□ 0.11
PDLIM7-207ENST00000486828 NPRL2Q8WTW4 380 aa15.76■□□□□ 0.11
PDLIM7-207ENST00000486828 KCNE4Q8WWG9 221 aa15.76■□□□□ 0.11
PDLIM7-207ENST00000486828 SPTSSAQ969W0 71 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms