RNA–Protein interactions for RNA: ENST00000486711.1

SMC4-218, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-218ENST00000486711 TREX1Q9NSU2 369 aa2.7□□□□□ -1.98
SMC4-218ENST00000486711 KPTNQ9Y664 436 aa2.7□□□□□ -1.98
SMC4-218ENST00000486711 NEURL4Q96JN8 1562 aa2.7□□□□□ -1.98
SMC4-218ENST00000486711 LRCOL1A6NCL2 159 aa2.69□□□□□ -1.98
SMC4-218ENST00000486711 CTNSO60931 367 aa2.69□□□□□ -1.98
SMC4-218ENST00000486711 SERPINB7O75635 380 aa2.69□□□□□ -1.98
SMC4-218ENST00000486711 MPZL1O95297 269 aa2.69□□□□□ -1.98
SMC4-218ENST00000486711 ETHE1O95571 254 aa2.69□□□□□ -1.98
SMC4-218ENST00000486711 CRYGCP07315 174 aa2.69□□□□□ -1.98
SMC4-218ENST00000486711 POLR2IP36954 125 aaKnown RBP2.69□□□□□ -1.98
SMC4-218ENST00000486711 CSKP41240 450 aa2.69□□□□□ -1.98
SMC4-218ENST00000486711 ERFP50548 548 aa2.69□□□□□ -1.98
SMC4-218ENST00000486711 PSMC5P62195 406 aa2.69□□□□□ -1.98
SMC4-218ENST00000486711 PAFAH1B2P68402 229 aa2.69□□□□□ -1.98
SMC4-218ENST00000486711 CDC20Q12834 499 aa2.69□□□□□ -1.98
SMC4-218ENST00000486711 OR1Q1Q15612 314 aa2.69□□□□□ -1.98
SMC4-218ENST00000486711 RNASE13Q5GAN3 156 aaKnown RBP2.69□□□□□ -1.98
SMC4-218ENST00000486711 GUSBP11Q6P575 273 aa2.69□□□□□ -1.98
SMC4-218ENST00000486711 Q6ZSR6 202 aa2.69□□□□□ -1.98
SMC4-218ENST00000486711 ERO1BQ86YB8 467 aa2.69□□□□□ -1.98
SMC4-218ENST00000486711 LINC00469Q8N7U9 141 aa2.69□□□□□ -1.98
SMC4-218ENST00000486711 OR51L1Q8NGJ5 315 aa2.69□□□□□ -1.98
SMC4-218ENST00000486711 OR13G1Q8NGZ3 307 aa2.69□□□□□ -1.98
SMC4-218ENST00000486711 OR1S1Q8NH92 325 aa2.69□□□□□ -1.98
SMC4-218ENST00000486711 DCAKDQ8WVC6 231 aa2.69□□□□□ -1.98
SMC4-218ENST00000486711 GHSRQ92847 366 aa2.69□□□□□ -1.98
SMC4-218ENST00000486711 CDX2Q99626 313 aaPredicted RBP2.69□□□□□ -1.98
SMC4-218ENST00000486711 ZMAT5Q9UDW3 170 aaKnown RBP2.69□□□□□ -1.98
SMC4-218ENST00000486711 OR51B2Q9Y5P1 312 aa2.69□□□□□ -1.98
SMC4-218ENST00000486711 PLA2R1Q13018 1463 aa2.69□□□□□ -1.98
SMC4-218ENST00000486711 ZNF850A8MQ14 1090 aa2.68□□□□□ -1.98
SMC4-218ENST00000486711 DFFAO00273 331 aa2.68□□□□□ -1.98
SMC4-218ENST00000486711 MANBAO00462 879 aa2.68□□□□□ -1.98
SMC4-218ENST00000486711 MYL12BO14950 172 aa2.68□□□□□ -1.98
SMC4-218ENST00000486711 RRP8O43159 456 aaKnown RBP2.68□□□□□ -1.98
SMC4-218ENST00000486711 PLIN3O60664 434 aa2.68□□□□□ -1.98
SMC4-218ENST00000486711 TTC4O95801 387 aa2.68□□□□□ -1.98
SMC4-218ENST00000486711 GCGP01275 180 aa2.68□□□□□ -1.98
SMC4-218ENST00000486711 THRAP10827 490 aa2.68□□□□□ -1.98
SMC4-218ENST00000486711 NUP62P37198 522 aaPredicted RBP2.68□□□□□ -1.98
SMC4-218ENST00000486711 RPL18AQ02543 176 aaKnown RBP2.68□□□□□ -1.98
SMC4-218ENST00000486711 TEX30Q5JUR7 227 aa2.68□□□□□ -1.98
SMC4-218ENST00000486711 OR4M1Q8NGD0 313 aa2.68□□□□□ -1.98
SMC4-218ENST00000486711 OR10Z1Q8NGY1 313 aa2.68□□□□□ -1.98
SMC4-218ENST00000486711 CIRBP-AS1Q8TBR5 109 aa2.68□□□□□ -1.98
SMC4-218ENST00000486711 ENKURQ8TC29 256 aa2.68□□□□□ -1.98
SMC4-218ENST00000486711 MITD1Q8WV92 249 aa2.68□□□□□ -1.98
SMC4-218ENST00000486711 BAALCQ8WXS3 180 aa2.68□□□□□ -1.98
SMC4-218ENST00000486711 FAM131CQ96AQ9 280 aa2.68□□□□□ -1.98
SMC4-218ENST00000486711 TMEM159Q96B96 161 aa2.68□□□□□ -1.98
SMC4-218ENST00000486711 KCNS1Q96KK3 526 aa2.68□□□□□ -1.98
SMC4-218ENST00000486711 SULT4A1Q9BR01 284 aa2.68□□□□□ -1.98
SMC4-218ENST00000486711 SFXN3Q9BWM7 321 aa2.68□□□□□ -1.98
SMC4-218ENST00000486711 GAL3ST2Q9H3Q3 398 aa2.68□□□□□ -1.98
SMC4-218ENST00000486711 KIR3DX1Q9H7L2 352 aa2.68□□□□□ -1.98
SMC4-218ENST00000486711 FBXO8Q9NRD0 319 aa2.68□□□□□ -1.98
SMC4-218ENST00000486711 GGA2Q9UJY4 613 aa2.68□□□□□ -1.98
SMC4-218ENST00000486711 ZNF835Q9Y2P0 537 aa2.68□□□□□ -1.98
SMC4-218ENST00000486711 ZNF257Q9Y2Q1 563 aa2.68□□□□□ -1.98
SMC4-218ENST00000486711 TNS2Q63HR2 1409 aa2.68□□□□□ -1.98
SMC4-218ENST00000486711 SBNO1A3KN83 1393 aa2.67□□□□□ -1.98
SMC4-218ENST00000486711 IGKV1-27A0A075B6S5 117 aa2.67□□□□□ -1.98
SMC4-218ENST00000486711 IGHV3-49A0A0A0MS15 119 aa2.67□□□□□ -1.98
SMC4-218ENST00000486711 IGHV3-72A0A0B4J1Y9 119 aa2.67□□□□□ -1.98
SMC4-218ENST00000486711 A0A0B4J2E0 115 aa2.67□□□□□ -1.98
SMC4-218ENST00000486711 RCBTB2O95199 551 aa2.67□□□□□ -1.98
SMC4-218ENST00000486711 IGLV3-25P01717 112 aa2.67□□□□□ -1.98
SMC4-218ENST00000486711 CPN2P22792 545 aa2.67□□□□□ -1.98
SMC4-218ENST00000486711 IVDP26440 423 aa2.67□□□□□ -1.98
SMC4-218ENST00000486711 LOXP28300 417 aaPredicted RBP2.67□□□□□ -1.98
SMC4-218ENST00000486711 C2orf54Q08AI8 447 aa2.67□□□□□ -1.98
SMC4-218ENST00000486711 ZNF816Q0VGE8 651 aaPredicted RBP2.67□□□□□ -1.98
SMC4-218ENST00000486711 ST3GAL4Q11206 333 aa2.67□□□□□ -1.98
SMC4-218ENST00000486711 HNRNPA1L2Q32P51 320 aaKnown RBP2.67□□□□□ -1.98
SMC4-218ENST00000486711 MFSD14CQ5VZR4 134 aa2.67□□□□□ -1.98
SMC4-218ENST00000486711 NEGR1Q7Z3B1 354 aa2.67□□□□□ -1.98
SMC4-218ENST00000486711 ZNF645Q8N7E2 425 aa2.67□□□□□ -1.98
SMC4-218ENST00000486711 RTN4IP1Q8WWV3 396 aaPredicted RBP2.67□□□□□ -1.98
SMC4-218ENST00000486711 RXFP2Q8WXD0 754 aa2.67□□□□□ -1.98
SMC4-218ENST00000486711 ING5Q8WYH8 240 aa2.67□□□□□ -1.98
SMC4-218ENST00000486711 OR8D1Q8WZ84 308 aa2.67□□□□□ -1.98
SMC4-218ENST00000486711 ESR2Q92731 530 aa2.67□□□□□ -1.98
SMC4-218ENST00000486711 OR4K3Q96R72 315 aa2.67□□□□□ -1.98
SMC4-218ENST00000486711 TMEM175Q9BSA9 504 aa2.67□□□□□ -1.98
SMC4-218ENST00000486711 TIMM29Q9BSF4 260 aa2.67□□□□□ -1.98
SMC4-218ENST00000486711 CHCHD7Q9BUK0 85 aa2.67□□□□□ -1.98
SMC4-218ENST00000486711 OSBPL11Q9BXB4 747 aa2.67□□□□□ -1.98
SMC4-218ENST00000486711 ZNF442Q9H7R0 627 aa2.67□□□□□ -1.98
SMC4-218ENST00000486711 BZW2Q9Y6E2 419 aaKnown RBP2.67□□□□□ -1.98
SMC4-218ENST00000486711 KIF27Q86VH2 1401 aa2.67□□□□□ -1.98
SMC4-218ENST00000486711 AQRO60306 1485 aaKnown RBP eCLIP2.66□□□□□ -1.982e-12■■■■■ 33.8
SMC4-218ENST00000486711 A0A0A6YYD5 115 aa2.66□□□□□ -1.98
SMC4-218ENST00000486711 CENPBD1B2RD01 187 aa2.66□□□□□ -1.98
SMC4-218ENST00000486711 M0R1X1 148 aa2.66□□□□□ -1.98
SMC4-218ENST00000486711 PSPHP1O15172 72 aa2.66□□□□□ -1.98
SMC4-218ENST00000486711 SCO1O75880 301 aa2.66□□□□□ -1.98
SMC4-218ENST00000486711 RBBP9O75884 186 aa2.66□□□□□ -1.98
SMC4-218ENST00000486711 PLEKHA8P1O95397 391 aa2.66□□□□□ -1.98
SMC4-218ENST00000486711 CYB5R3P00387 301 aaPredicted RBP2.66□□□□□ -1.98
SMC4-218ENST00000486711 CSTAP01040 98 aa2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms